replication-associated_protein

Euk-Vir

Anguilla_anguilla_circovirus

replication-associated_protein__YP_009000900__Anguilla_anguilla_circovirus__1420600

Identity

87.1 mean pLDDT

Shotokuvirae› Cressdnaviricota› Arfiviricetes› Cirlivirales› Circoviridae› Circovirus› Anguilla_anguilla_circovirus

TaxID: 1420600

View cluster (114 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 158-279

PDB

Domain cluster: rep: replication-associated_protein__YP_009001745__Dragonfly_larvae_associated_circular_virus-5_Viruses.__X__D171-266

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00910.29 best	RNA_helicase	55.3	1.20e-14	69.7%	99.1%

D2 medium residues 7-97

PDB

Domain cluster: rep: replication_associated_protein__YP_009237599__Lake_Sarah-associated_circular_molecule_10_Viruses.__X__D15-119

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02407.23 best	Viral_Rep	76.9	1.60e-21	92.3%	96.3%

D3 medium residues 106-147

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5um2A02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.71	48.0	3.26e-01	71.4%	70.0%
2cmpA00	1.10.10.1400	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Terminase, small subunit, N-terminal DNA-binding domain, HTH motif	0.60	49.0	4.58e-01	100.0%	92.9%
2r6tB01	1.20.1200.10	Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like	0.56	39.0	2.65e-01	78.6%	18.7%