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replication-associated_protein
Euk-VirHuman_circovirus_VS6600022
replication-associated_protein__YP_009051960__Human_circovirus_VS6600022__1525173
Identity
- Accession:
- YP_009051960 ↗
- Protein ID:
- replication-associated_protein
- Kingdom:
- euk
Quality
79.0
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Arfiviricetes›
Ringavirales›
Pecoviridae›
Amaruvirus›
Human_circovirus_VS6600022
TaxID: 1525173
Cluster
View cluster (107 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-105
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02407.23 best | Viral_Rep | 31.9 | 1.80e-07 | 90.8% | 84.2% |
CATH (79)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6h8oA00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.88 | 78.0 | 7.95e-01 | 100.0% | 95.8% |
| 2hw0A00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.83 | 76.0 | 7.13e-01 | 100.0% | 83.5% |
| 1f08B00 | 3.40.1310.10 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.76 | 70.0 | 6.08e-01 | 100.0% | 71.0% |
| 1r9wA00 | 3.40.1310.10 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.73 | 67.0 | 5.91e-01 | 100.0% | 74.6% |
| 1l2mA00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.72 | 66.0 | 6.23e-01 | 100.0% | 89.0% |
| 2lqjA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.71 | 54.0 | 5.50e-01 | 79.6% | 91.5% |
| 2bvfA03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.69 | 63.0 | 4.90e-01 | 100.0% | 70.0% |
| 4nohA01 | 3.30.70.3060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 48.0 | 5.49e-01 | 80.6% | 100.0% |
| 1a7gE00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.68 | 50.0 | 5.43e-01 | 78.6% | 97.6% |
| 3c19A01 | 3.30.70.1380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transcriptional regulatory protein pf0864 domain like | 0.68 | 51.0 | 5.15e-01 | 79.6% | 84.8% |
| 2uuvB01 | 3.40.462.40 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidase, cap domain/gating helix | 0.68 | 61.0 | 4.43e-01 | 99.0% | 65.2% |
| 2x3gA00 | 3.30.70.1910 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 56.0 | 5.34e-01 | 91.8% | 83.6% |
| 3amiA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.67 | 50.0 | 4.03e-01 | 79.6% | 93.5% |
| 3bm7A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 51.0 | 5.03e-01 | 80.6% | 93.4% |
| 2apoA03 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 50.0 | 5.20e-01 | 78.6% | 97.8% |
| 1pbuA00 | 3.30.70.1010 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Translation elongation factor EF1B, gamma chain, conserved domain | 0.67 | 60.0 | 5.04e-01 | 99.0% | 73.5% |
| 2mq8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.66 | 49.0 | 4.69e-01 | 77.6% | 88.4% |
| 2raqA01 | 3.30.70.1340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MTH889-like domain | 0.66 | 50.0 | 5.29e-01 | 79.6% | 92.9% |
| 1q2lA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.66 | 48.0 | 3.68e-01 | 76.5% | 75.8% |
| 1ygyA04 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.66 | 48.0 | 5.41e-01 | 78.6% | 98.7% |
| 1zpvA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.66 | 49.0 | 5.23e-01 | 78.6% | 98.8% |
| 1nbeB01 | 3.30.70.140 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aspartate carbamoyltransferase regulatory subunit, N-terminal domain | 0.66 | 49.0 | 5.03e-01 | 78.6% | 82.8% |
| 1uw4A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.66 | 50.0 | 5.19e-01 | 81.6% | 100.0% |
| 3ce8A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 49.0 | 5.16e-01 | 81.6% | 95.5% |
| 3mgjA00 | 3.30.70.2690 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › LOR/SDH bifunctional enzyme, conserved domain | 0.65 | 49.0 | 4.95e-01 | 79.6% | 92.7% |
| 2nyiA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.65 | 48.0 | 5.25e-01 | 78.6% | 97.5% |
| 2ijrA01 | 3.30.70.1270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Api92-like domains | 0.65 | 47.0 | 4.77e-01 | 78.6% | 76.3% |
| 1y7pB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.65 | 47.0 | 5.17e-01 | 77.6% | 96.2% |
| 1qd1A01 | 3.30.990.10 | Alpha Beta › 2-Layer Sandwich › Formiminotransferase-cyclodeaminase; Chain B, domain 1 › Formiminotransferase, N-terminal subdomain | 0.64 | 48.0 | 3.93e-01 | 78.6% | 98.9% |
| 2joqA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 45.0 | 5.06e-01 | 73.5% | 100.0% |
| 4dpoB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 48.0 | 4.79e-01 | 79.6% | 93.1% |
| 1u8sA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 48.0 | 5.11e-01 | 79.6% | 97.6% |
| 3o1lB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 47.0 | 4.89e-01 | 77.6% | 93.2% |
| 3nrbB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 47.0 | 5.00e-01 | 78.6% | 95.2% |
| 3b82A06 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 46.0 | 4.33e-01 | 80.6% | 62.0% |
| 3popA02 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.63 | 55.0 | 4.14e-01 | 99.0% | 63.1% |
| 1rlhA02 | 3.40.1520.10 | Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1634 › Ta1353-like | 0.63 | 46.0 | 4.60e-01 | 76.5% | 100.0% |
| 1darA05 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 44.0 | 4.65e-01 | 79.6% | 82.8% |
| 1nxiA00 | 3.30.70.970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RraB-like | 0.63 | 47.0 | 4.32e-01 | 80.6% | 80.3% |
| 2f1fA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 46.0 | 4.96e-01 | 77.6% | 98.7% |
| 3pm9A04 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 43.0 | 4.55e-01 | 71.4% | 95.4% |
| 3vteA03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.62 | 55.0 | 4.53e-01 | 99.0% | 68.6% |
| 2rrnA01 | 3.30.70.2040 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 46.0 | 4.85e-01 | 77.6% | 97.6% |
| 2cpxA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.62 | 45.0 | 4.87e-01 | 75.5% | 100.0% |
| 5i2cB01 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.62 | 50.0 | 4.34e-01 | 85.7% | 70.5% |
| 3n0vA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 46.0 | 4.89e-01 | 77.6% | 98.8% |
| 1rtzA00 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.62 | 53.0 | 4.58e-01 | 93.9% | 99.3% |
| 2dt9A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 44.0 | 4.81e-01 | 75.5% | 98.7% |
| 2bopA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.62 | 47.0 | 4.96e-01 | 81.6% | 100.0% |
| 1iujA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 47.0 | 4.70e-01 | 81.6% | 98.0% |
| 1gh8A00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.61 | 46.0 | 4.76e-01 | 79.6% | 96.6% |
| 5d79A03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.61 | 54.0 | 4.38e-01 | 99.0% | 66.8% |
| 4dzdA01 | 3.30.70.1200 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 1 | 0.61 | 41.0 | 4.67e-01 | 77.6% | 95.7% |
| 3aawA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.61 | 49.0 | 4.14e-01 | 87.8% | 71.5% |
| 5yppA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.61 | 49.0 | 5.10e-01 | 89.8% | 97.8% |
| 2dkhA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.60 | 44.0 | 4.25e-01 | 77.6% | 70.2% |
| 2qrrA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 45.0 | 4.55e-01 | 79.6% | 87.6% |
| 2r7rA04 | 3.30.70.2480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 44.0 | 3.78e-01 | 77.6% | 70.1% |
| 1ywhC03 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.60 | 35.0 | 3.66e-01 | 86.7% | 62.5% |
| 2n99A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.60 | 33.0 | 3.68e-01 | 85.7% | 68.4% |
| 5fiiB00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.59 | 43.0 | 4.66e-01 | 76.5% | 100.0% |
| 2cq4A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.59 | 44.0 | 4.42e-01 | 77.6% | 84.5% |
| 8es5A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 41.0 | 3.67e-01 | 71.4% | 91.3% |
| 2qswA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 42.0 | 4.37e-01 | 76.5% | 85.6% |
| 2kczA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 41.0 | 3.51e-01 | 72.4% | 92.3% |
| 6vh5C03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 47.0 | 4.88e-01 | 96.9% | 97.8% |
| 4ozjA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 52.0 | 5.09e-01 | 100.0% | 99.0% |
| 7o4xA01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 50.0 | 5.02e-01 | 98.0% | 100.0% |
| 5a2fA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 40.0 | 3.84e-01 | 74.5% | 86.6% |
| 5t0oA02 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.55 | 47.0 | 4.72e-01 | 95.9% | 98.1% |
| 5w2fA01 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.55 | 38.0 | 4.05e-01 | 73.5% | 86.0% |
| 3so5A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 39.0 | 3.85e-01 | 74.5% | 84.8% |
| 4dn9B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 48.0 | 4.87e-01 | 99.0% | 99.0% |
| 3mwbB03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.54 | 46.0 | 4.74e-01 | 100.0% | 98.9% |
| 5a67A00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.54 | 43.0 | 3.45e-01 | 88.8% | 95.1% |
| 1x4eA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 40.0 | 4.22e-01 | 79.6% | 91.8% |
| 1wvqA00 | 3.40.1520.10 | Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1634 › Ta1353-like | 0.52 | 44.0 | 3.76e-01 | 93.9% | 69.9% |
| 3r8jA00 | 3.20.80.10 | Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain | 0.52 | 44.0 | 3.73e-01 | 98.0% | 74.4% |
| 2govA01 | 3.20.80.10 | Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain | 0.51 | 43.0 | 3.69e-01 | 98.0% | 83.2% |
ECOD (97)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2796430 | 304.55.1.5 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Viral_Rep | 0.89 | 82.0 | 8.11e-01 | 100.0% | 92.2% |
| 2391478 | 304.55.1.5 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Viral_Rep | 0.88 | 78.0 | 7.95e-01 | 100.0% | 95.8% |
| 3621982 | 304.55.1.5 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Viral_Rep | 0.87 | 79.0 | 7.57e-01 | 100.0% | 85.5% |
| 2966256 | 304.55.1.1 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Gemini_AL1 | 0.76 | 70.0 | 6.80e-01 | 100.0% | 93.5% |
| 4218099 | 304.55.1.1 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Gemini_AL1 | 0.76 | 69.0 | 6.21e-01 | 100.0% | 94.1% |
| 4011130 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.73 | 66.0 | 4.82e-01 | 99.0% | 57.6% |
| 4521182 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.72 | 65.0 | 4.85e-01 | 99.0% | 60.8% |
| 4226508 | 304.12.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MgtC_SapB_C | 0.72 | 53.0 | 5.65e-01 | 77.6% | 98.8% |
| 4263302 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.71 | 64.0 | 4.73e-01 | 99.0% | 55.3% |
| 4407903 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.71 | 64.0 | 4.72e-01 | 99.0% | 56.9% |
| 4015784 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.71 | 64.0 | 4.70e-01 | 99.0% | 56.2% |
| 4315665 | 304.8.1.91 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF1424 | 0.71 | 64.0 | 4.97e-01 | 99.0% | 81.4% |
| 4018691 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.71 | 64.0 | 4.69e-01 | 99.0% | 57.3% |
| 5071207 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.71 | 54.0 | 5.52e-01 | 79.6% | 93.6% |
| 4959045 | 304.8.1.81 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › REP_ORF2-G2P | 0.71 | 62.0 | 5.42e-01 | 98.0% | 81.3% |
| 4682347 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.71 | 63.0 | 4.55e-01 | 98.0% | 56.3% |
| 3284477 | 304.12.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MgtC_SapB_C | 0.70 | 52.0 | 5.54e-01 | 77.6% | 100.0% |
| 4947614 | 304.130.1.1 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion | 0.70 | 54.0 | 5.59e-01 | 80.6% | 87.8% |
| 4951741 | 304.130.1.1 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion | 0.70 | 53.0 | 5.55e-01 | 80.6% | 87.8% |
| 4184306 | 304.130.1.1 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion | 0.70 | 53.0 | 5.55e-01 | 80.6% | 87.8% |
| 5009993 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.70 | 62.0 | 5.03e-01 | 98.0% | 98.9% |
| 3638657 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.69 | 61.0 | 4.52e-01 | 99.0% | 55.4% |
| 4219489 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.69 | 63.0 | 4.50e-01 | 99.0% | 54.5% |
| 4030594 | 304.46.1.1 ↗ | a+b two layers › Alpha-beta plaits › eEF1-gamma domain › eEF1-gamma domain › EF1G | 0.69 | 62.0 | 5.23e-01 | 98.0% | 72.5% |
| 4085092 | 304.12.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MgtC_SapB_C | 0.69 | 52.0 | 5.34e-01 | 79.6% | 94.7% |
| 4116209 | 304.130.1.1 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion | 0.69 | 52.0 | 5.46e-01 | 80.6% | 87.8% |
| 4483977 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.69 | 51.0 | 5.09e-01 | 77.6% | 95.0% |
| 3596967 | 304.46.1.0 ↗ | a+b two layers › Alpha-beta plaits › eEF1-gamma domain › eEF1-gamma domain | 0.69 | 62.0 | 5.24e-01 | 99.0% | 72.2% |
| 3604508 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.68 | 50.0 | 5.24e-01 | 77.6% | 94.4% |
| 3291378 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.68 | 61.0 | 4.61e-01 | 99.0% | 56.6% |
| 4075488 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.68 | 62.0 | 4.46e-01 | 99.0% | 56.7% |
| 4996340 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.68 | 49.0 | 5.36e-01 | 75.5% | 100.0% |
| 3504328 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.68 | 50.0 | 5.39e-01 | 76.5% | 100.0% |
| 3497180 | 304.46.1.1 ↗ | a+b two layers › Alpha-beta plaits › eEF1-gamma domain › eEF1-gamma domain › EF1G | 0.68 | 60.0 | 5.12e-01 | 96.9% | 72.9% |
| 4043242 | 304.6.1.5 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › Cytokin-bind | 0.67 | 60.0 | 4.52e-01 | 99.0% | 60.0% |
| 3414433 | 304.4.1.52 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF7153 | 0.67 | 58.0 | 4.32e-01 | 96.9% | 88.9% |
| 4108910 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.67 | 48.0 | 5.11e-01 | 74.5% | 90.6% |
| 3943490 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.67 | 49.0 | 5.23e-01 | 76.5% | 97.6% |
| 3930449 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.67 | 49.0 | 5.16e-01 | 77.6% | 90.0% |
| 5078835 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.67 | 59.0 | 4.49e-01 | 99.0% | 64.6% |
| 4936076 | 304.8.1.96 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF26798 | 0.67 | 48.0 | 5.17e-01 | 75.5% | 96.5% |
| 4950017 | 304.134.1.3 ↗ | a+b two layers › Alpha-beta plaits › MJ1480-like › MJ1480-like › PF26798 | 0.67 | 48.0 | 5.15e-01 | 75.5% | 96.5% |
| 4962586 | 304.8.1.8 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 | 0.67 | 49.0 | 5.24e-01 | 76.5% | 97.6% |
| 4938886 | 304.8.1.96 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF26798 | 0.67 | 48.0 | 5.16e-01 | 75.5% | 96.5% |
| 5007296 | 304.8.1.96 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF26798 | 0.67 | 48.0 | 4.97e-01 | 74.5% | 92.2% |
| 4988375 | 304.8.1.96 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF26798 | 0.67 | 49.0 | 5.11e-01 | 76.5% | 94.3% |
| 4614439 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.67 | 50.0 | 5.42e-01 | 81.6% | 97.5% |
| 3735140 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.67 | 59.0 | 4.31e-01 | 99.0% | 54.4% |
| 4973571 | 304.4.1.82 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF3303 | 0.66 | 50.0 | 5.30e-01 | 78.6% | 90.6% |
| 4966013 | 304.8.1.96 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF26798 | 0.66 | 48.0 | 5.09e-01 | 75.5% | 96.5% |
| 5017989 | 304.4.1.82 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF3303 | 0.66 | 49.0 | 5.15e-01 | 78.6% | 88.9% |
| 4996341 | 304.8.1.96 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF26798 | 0.66 | 45.0 | 4.96e-01 | 71.4% | 96.2% |
| 5066768 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.66 | 51.0 | 5.00e-01 | 82.7% | 83.8% |
| 4309132 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.65 | 57.0 | 4.33e-01 | 98.0% | 58.7% |
| 5050593 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.65 | 57.0 | 4.42e-01 | 99.0% | 60.9% |
| 3788989 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.65 | 48.0 | 5.22e-01 | 78.6% | 98.8% |
| 5033599 | 304.4.1.82 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF3303 | 0.65 | 50.0 | 5.49e-01 | 81.6% | 100.0% |
| 138988 | 304.134.1.1 ↗ | a+b two layers › Alpha-beta plaits › MJ1480-like › MJ1480-like › Saccharop_dh_N | 0.65 | 49.0 | 4.93e-01 | 79.6% | 91.8% |
| 4975988 | 304.134.1.1 ↗ | a+b two layers › Alpha-beta plaits › MJ1480-like › MJ1480-like › Saccharop_dh_N | 0.65 | 46.0 | 5.14e-01 | 73.5% | 100.0% |
| 5021963 | 304.8.1.116 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF3303 | 0.65 | 48.0 | 4.74e-01 | 78.6% | 73.3% |
| 4060458 | 304.8.1.22 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › AHAS-like_ACT | 0.64 | 48.0 | 5.21e-01 | 81.6% | 97.5% |
| 3995251 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.64 | 46.0 | 4.96e-01 | 73.5% | 97.5% |
| 4316814 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.64 | 49.0 | 4.98e-01 | 80.6% | 91.5% |
| 4017351 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.64 | 57.0 | 4.06e-01 | 98.0% | 55.2% |
| 3279556 | 304.6.1.5 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › Cytokin-bind | 0.64 | 56.0 | 4.19e-01 | 98.0% | 57.2% |
| 4954911 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.64 | 47.0 | 5.02e-01 | 78.6% | 95.3% |
| 4951657 | 304.4.1.82 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF3303 | 0.63 | 47.0 | 4.99e-01 | 78.6% | 90.6% |
| 4672795 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.63 | 45.0 | 4.97e-01 | 77.6% | 97.3% |
| 4299862 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.63 | 48.0 | 4.79e-01 | 80.6% | 81.0% |
| 2607848 | 304.134.1.1 ↗ | a+b two layers › Alpha-beta plaits › MJ1480-like › MJ1480-like › Saccharop_dh_N | 0.63 | 46.0 | 5.00e-01 | 76.5% | 96.3% |
| 4027426 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.63 | 45.0 | 4.18e-01 | 80.6% | 57.7% |
| 4949247 | 304.8.1.22 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › AHAS-like_ACT | 0.63 | 47.0 | 5.10e-01 | 81.6% | 98.8% |
| 4963370 | 304.134.1.1 ↗ | a+b two layers › Alpha-beta plaits › MJ1480-like › MJ1480-like › Saccharop_dh_N | 0.63 | 45.0 | 4.88e-01 | 74.5% | 95.0% |
| 4030911 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.63 | 47.0 | 5.05e-01 | 80.6% | 100.0% |
| 4371656 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.63 | 46.0 | 4.69e-01 | 77.6% | 81.1% |
| 4957999 | 304.8.1.22 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › AHAS-like_ACT | 0.63 | 49.0 | 4.97e-01 | 84.7% | 90.5% |
| 3627328 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.62 | 45.0 | 4.41e-01 | 77.6% | 76.4% |
| 4565255 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.62 | 45.0 | 4.73e-01 | 77.6% | 84.4% |
| 3313723 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.62 | 46.0 | 4.68e-01 | 79.6% | 87.4% |
| 3341279 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.61 | 45.0 | 4.39e-01 | 78.6% | 75.5% |
| 3962952 | 304.8.1.1 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Thr_dehydrat_C | 0.61 | 48.0 | 4.80e-01 | 83.7% | 83.0% |
| 3586613 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.61 | 46.0 | 4.85e-01 | 79.6% | 96.5% |
| 4647651 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.61 | 47.0 | 4.48e-01 | 84.7% | 71.7% |
| 4987588 | 304.8.1.82 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF27325 | 0.60 | 44.0 | 4.52e-01 | 77.6% | 80.0% |
| 3522051 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 42.0 | 4.60e-01 | 75.5% | 91.0% |
| 3344220 | 304.9.1.96 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF26250 | 0.60 | 54.0 | 5.44e-01 | 99.0% | 96.0% |
| 5026422 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 44.0 | 4.21e-01 | 78.6% | 72.2% |
| 4173939 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.60 | 43.0 | 4.47e-01 | 76.5% | 85.6% |
| 4234397 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.59 | 47.0 | 4.67e-01 | 89.8% | 84.0% |
| 3601208 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.59 | 51.0 | 4.30e-01 | 100.0% | 90.6% |
| 4151399 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.59 | 43.0 | 4.61e-01 | 77.6% | 96.2% |
| 5049083 | 304.37.1.0 ↗ | a+b two layers › Alpha-beta plaits › Sulfite reductase, domains 1 and 3 › Sulfite reductase, domains 1 and 3 | 0.59 | 51.0 | 3.91e-01 | 100.0% | 70.6% |
| 3585521 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.58 | 42.0 | 4.60e-01 | 76.5% | 98.8% |
| 3611507 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.58 | 51.0 | 4.19e-01 | 100.0% | 91.4% |
| 4997715 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.57 | 44.0 | 3.75e-01 | 83.7% | 84.7% |
| 4058622 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.53 | 46.0 | 3.43e-01 | 99.0% | 63.4% |
| 4400469 | 101.1.2.841 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27221 | 0.50 | 44.0 | 3.82e-01 | 100.0% | 77.2% |
D2
high
residues 114-161
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r0rB00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.74 | 58.0 | 4.97e-01 | 87.5% | 78.2% |
| 1gpjA03 | 1.10.1200.70 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glutamyl tRNA-reductase dimerization domain | 0.72 | 50.0 | 4.17e-01 | 75.0% | 44.7% |
| 2pbiA02 | 1.10.1240.60 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.70 | 60.0 | 4.79e-01 | 100.0% | 55.4% |
| 2f46A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.69 | 53.0 | 3.80e-01 | 87.5% | 28.9% |
| 3dfgA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 49.0 | 4.94e-01 | 81.2% | 100.0% |
| 2l09A01 | 1.10.8.550 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B | 0.67 | 44.0 | 4.37e-01 | 70.8% | 63.5% |
| 1sxjB03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.67 | 55.0 | 4.58e-01 | 95.8% | 100.0% |
| 2p6rA03 | 1.10.3380.30 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › | 0.66 | 56.0 | 3.64e-01 | 95.8% | 31.2% |
| 1lp1A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.66 | 48.0 | 4.63e-01 | 77.1% | 67.3% |
| 7s03A01 | 1.10.10.1450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.66 | 51.0 | 5.07e-01 | 85.4% | 94.0% |
| 3zbhA00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.65 | 48.0 | 3.97e-01 | 81.2% | 48.9% |
| 4fe7A03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 55.0 | 4.35e-01 | 100.0% | 48.6% |
| 1kxpD02 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.64 | 46.0 | 3.87e-01 | 79.2% | 62.5% |
| 7a0hA01 | 3.30.1140.60 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit | 0.64 | 54.0 | 4.33e-01 | 97.9% | 61.4% |
| 1yrtA03 | 1.10.150.920 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.64 | 46.0 | 4.69e-01 | 81.2% | 83.3% |
| 1ywqA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.63 | 51.0 | 3.37e-01 | 89.6% | 45.7% |
| 3ulqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 51.0 | 4.84e-01 | 93.8% | 86.2% |
| 1a04A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 51.0 | 4.38e-01 | 93.8% | 63.7% |
| 3czpB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 56.0 | 3.60e-01 | 100.0% | 28.6% |
| 3p0hB02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.61 | 50.0 | 3.09e-01 | 91.7% | 22.4% |
| 2lhjA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.59 | 45.0 | 4.00e-01 | 91.7% | 91.3% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 49.0 | 4.48e-01 | 93.8% | 70.3% |
| 4adnA01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.58 | 44.0 | 3.73e-01 | 85.4% | 63.5% |
| 1p4wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 47.0 | 4.02e-01 | 100.0% | 72.4% |
| 1sy7A02 | 1.20.1370.20 | Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › Catalase, four-helical domain | 0.56 | 40.0 | 3.78e-01 | 81.2% | 65.6% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.53 | 41.0 | 3.80e-01 | 100.0% | 95.9% |
| 3hx4A01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.50 | 40.0 | 2.79e-01 | 100.0% | 70.2% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3618122 | 2004.1.1.55 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RNA_helicase | 0.77 | 65.0 | 4.34e-01 | 100.0% | 24.1% |
| 3290277 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.76 | 64.0 | 6.41e-01 | 97.9% | 94.0% |
| 1695424 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.71 | 55.0 | 4.88e-01 | 95.8% | 58.6% |
| 4173465 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.68 | 54.0 | 5.22e-01 | 100.0% | 80.0% |
| 4537351 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.67 | 59.0 | 5.64e-01 | 97.9% | 87.3% |
| 4608916 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.66 | 58.0 | 5.60e-01 | 100.0% | 87.3% |
| 3968817 | 3831.1.1.1 ↗ | alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › LprI | 0.65 | 47.0 | 3.88e-01 | 77.1% | 43.5% |
| 3968369 | 4168.1.1.1 ↗ | alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain › HAMP | 0.62 | 52.0 | 4.93e-01 | 100.0% | 81.7% |
| 3353468 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.61 | 49.0 | 3.26e-01 | 93.8% | 30.0% |
| 4987508 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.59 | 45.0 | 3.87e-01 | 81.2% | 69.3% |
| 4099504 | 604.17.1.0 ↗ | alpha bundles › Spectrin repeat-like › MTH_863 C-terminal domain-like › MTH_863 C-terminal domain-like | 0.58 | 47.0 | 4.48e-01 | 97.9% | 93.3% |
D3
high
residues 168-324
Domain cluster:
rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00910.29 best | RNA_helicase | 26.3 | 1.20e-05 | 59.9% | 82.9% |