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replication-associated_protein
Euk-VirSwitchgrass_mosaic-associated_virus_1
replication-associated_protein__YP_009111310__Switchgrass_mosaic-associated_virus_1__1571533
Identity
- Accession:
- YP_009111310 ↗
- Protein ID:
- replication-associated_protein
- Kingdom:
- euk
Quality
77.0
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Repensiviricetes›
Geplafuvirales›
Geminiviridae›
Mastrevirus›
Switchgrass_mosaic-associated_virus_1
TaxID: 1571533
Cluster
View cluster (34 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 26-126
Domain cluster:
rep: replication-associated_protein__YP_009553348__Odonata-associated_circular_virus-7_Viruses.__X__D5-106
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00799.27 best | Gemini_AL1 | 78.5 | 5.50e-22 | 100.0% | 87.6% |
D2
medium
residues 147-195
Domain cluster:
rep: replication_associated_protein__YP_006331073__Maize_streak_Reunion_virus__1182518__D173-216
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 36.9 | 4.60e-09 | 98.0% | 41.1% |
D3
medium
residues 208-256