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replication-associated_protein
Euk-VirAvon-Heathcote_Estuary_associated_circular_virus_24
replication-associated_protein__YP_009126936__Avon-Heathcote_Estuary_associated_circular_virus_24__1618248
Identity
- Accession:
- YP_009126936 ↗
- Protein ID:
- replication-associated_protein
- Kingdom:
- euk
Quality
79.6
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Arfiviricetes›
Gredzevirales›
Ouroboviridae›
Pylenevirus›
Avon-Heathcote_Estuary_associated_circular_virus_24
TaxID: 1618248
Cluster
View cluster (111 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-97
Domain cluster:
rep: replication_associated_protein__YP_009237599__Lake_Sarah-associated_circular_molecule_10_Viruses.__X__D15-119
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02407.23 best | Viral_Rep | 74.7 | 7.80e-21 | 91.6% | 98.8% |
D2
high
residues 109-156
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dk8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 50.0 | 4.69e-01 | 100.0% | 76.9% |
| 3dfgA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 50.0 | 5.06e-01 | 97.9% | 97.9% |
| 7p5hB03 | 1.20.1440.230 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain | 0.59 | 44.0 | 3.69e-01 | 83.3% | 94.4% |
| 1kf6A02 | 3.90.700.10 | Alpha Beta › Alpha-Beta Complex › Flavocytochrome C3; Chain A, domain 1 › Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0.59 | 46.0 | 3.64e-01 | 93.8% | 92.2% |
| 2ox6D00 | 1.10.3100.10 | Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein | 0.56 | 43.0 | 3.24e-01 | 100.0% | 41.0% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 317770 | 101.1.4.22 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF4447 | 0.63 | 52.0 | 3.73e-01 | 100.0% | 39.3% |
| 3362122 | 2004.1.1.44 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PRK | 0.62 | 51.0 | 3.38e-01 | 100.0% | 47.8% |
| 4951507 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.60 | 51.0 | 3.41e-01 | 100.0% | 45.5% |
D3
high
residues 169-300
Domain cluster:
rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764
CATH (85)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1svmA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.76 | 71.0 | 6.71e-01 | 100.0% | 97.4% |
| 1tueD00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.74 | 68.0 | 5.89e-01 | 100.0% | 70.8% |
| 3ja8204 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.74 | 69.0 | 5.00e-01 | 100.0% | 51.0% |
| 1g8pA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.74 | 68.0 | 5.87e-01 | 100.0% | 93.0% |
| 4zpxA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.73 | 67.0 | 5.53e-01 | 100.0% | 88.4% |
| 7jgsE01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 67.0 | 6.01e-01 | 100.0% | 90.6% |
| 3vkgA05 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.71 | 65.0 | 6.23e-01 | 100.0% | 98.0% |
| 3m6aA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 64.0 | 6.15e-01 | 100.0% | 89.3% |
| 4r7zA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 64.0 | 4.82e-01 | 100.0% | 53.2% |
| 5m7oA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 63.0 | 5.84e-01 | 100.0% | 91.7% |
| 1l8qA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 63.0 | 5.87e-01 | 100.0% | 87.3% |
| 3vkgA17 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 58.0 | 5.95e-01 | 100.0% | 99.2% |
| 2ht1A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 61.0 | 5.10e-01 | 100.0% | 84.0% |
| 4akgA15 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 57.0 | 5.78e-01 | 97.7% | 97.7% |
| 5ywwA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 56.0 | 5.01e-01 | 100.0% | 66.3% |
| 6s3eB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 58.0 | 5.13e-01 | 99.2% | 91.2% |
| 2ekdA00 | 3.40.50.11570 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF257 | 0.62 | 55.0 | 4.77e-01 | 97.7% | 87.6% |
| 2yjtD00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 51.0 | 4.71e-01 | 89.4% | 97.6% |
| 8kcaB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 51.0 | 4.65e-01 | 88.6% | 91.2% |
| 1gz0B02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.61 | 46.0 | 4.30e-01 | 79.5% | 98.2% |
| 1hv8A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 50.0 | 4.83e-01 | 87.9% | 100.0% |
| 7f1uA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.61 | 52.0 | 4.23e-01 | 100.0% | 49.2% |
| 3aczA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.61 | 52.0 | 4.21e-01 | 100.0% | 48.4% |
| 3rc3A03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 51.0 | 4.78e-01 | 89.4% | 92.5% |
| 6l5oA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 55.0 | 4.78e-01 | 100.0% | 90.7% |
| 1cs1A01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.61 | 51.0 | 4.19e-01 | 100.0% | 49.4% |
| 2vl7A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 55.0 | 5.07e-01 | 100.0% | 97.1% |
| 8bixC01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.61 | 51.0 | 4.20e-01 | 100.0% | 50.2% |
| 3ri6A01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.60 | 51.0 | 4.28e-01 | 100.0% | 52.8% |
| 3hdvB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 41.0 | 4.19e-01 | 78.0% | 72.2% |
| 1cl1A01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.60 | 52.0 | 4.18e-01 | 100.0% | 48.8% |
| 4oc9A01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.60 | 50.0 | 3.97e-01 | 100.0% | 43.0% |
| 3c5qA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.60 | 49.0 | 4.02e-01 | 87.9% | 92.6% |
| 2hzgA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.60 | 48.0 | 3.88e-01 | 85.6% | 89.9% |
| 1reqB01 | 3.20.20.240 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Methylmalonyl-CoA mutase | 0.59 | 49.0 | 3.44e-01 | 89.4% | 65.2% |
| 1xtiA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 50.0 | 4.64e-01 | 100.0% | 72.6% |
| 3cu2A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 51.0 | 4.25e-01 | 93.9% | 91.0% |
| 3wqoA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.59 | 47.0 | 3.74e-01 | 84.8% | 97.0% |
| 1c4oA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 52.0 | 4.70e-01 | 100.0% | 71.4% |
| 2ctzA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.59 | 51.0 | 3.96e-01 | 100.0% | 43.5% |
| 7z67A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 54.0 | 4.53e-01 | 100.0% | 62.8% |
| 2p6nA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 49.0 | 4.58e-01 | 89.4% | 96.2% |
| 4ldaB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 41.0 | 4.17e-01 | 79.5% | 74.0% |
| 2qg6A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 45.0 | 4.01e-01 | 88.6% | 58.8% |
| 5lklB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 50.0 | 4.85e-01 | 100.0% | 85.4% |
| 7pliF02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 48.0 | 4.60e-01 | 100.0% | 78.1% |
| 2amlB01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.57 | 45.0 | 3.91e-01 | 100.0% | 53.1% |
| 7clgB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 51.0 | 4.89e-01 | 98.5% | 97.4% |
| 1oywA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 48.0 | 4.80e-01 | 100.0% | 90.2% |
| 3kwsA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.56 | 45.0 | 3.62e-01 | 85.6% | 97.4% |
| 1qz9A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.56 | 51.0 | 4.09e-01 | 100.0% | 53.6% |
| 2vp8B00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.56 | 48.0 | 3.99e-01 | 93.2% | 95.8% |
| 1ly1A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 45.0 | 4.29e-01 | 89.4% | 73.0% |
| 4r5zA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.56 | 51.0 | 4.26e-01 | 100.0% | 58.1% |
| 4dadA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 42.0 | 4.27e-01 | 92.4% | 80.5% |
| 2b4aA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 39.0 | 4.15e-01 | 92.4% | 82.8% |
| 3e7wA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.56 | 47.0 | 3.41e-01 | 100.0% | 31.2% |
| 1xrsA00 | 3.20.20.440 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › D-Lysine 5,6-aminomutase alpha subunit | 0.55 | 48.0 | 3.20e-01 | 93.9% | 58.7% |
| 2bdtA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 45.0 | 4.18e-01 | 90.2% | 86.0% |
| 4s1wB02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.55 | 43.0 | 4.23e-01 | 100.0% | 77.4% |
| 1ipaA02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.55 | 39.0 | 3.72e-01 | 72.7% | 100.0% |
| 6fwrA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 49.0 | 4.30e-01 | 100.0% | 76.0% |
| 6yhrA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 47.0 | 4.08e-01 | 100.0% | 60.0% |
| 1dcfA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 43.0 | 4.29e-01 | 97.7% | 82.7% |
| 1u5hA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.54 | 45.0 | 3.88e-01 | 92.4% | 96.0% |
| 3ni2A01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.54 | 47.0 | 3.29e-01 | 100.0% | 29.4% |
| 1amuA02 | 3.40.50.980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 46.0 | 4.60e-01 | 100.0% | 89.3% |
| 4kqcA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 48.0 | 4.52e-01 | 100.0% | 97.5% |
| 1rz3A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 48.0 | 4.36e-01 | 100.0% | 79.2% |
| 3vnrA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.53 | 46.0 | 3.34e-01 | 100.0% | 32.1% |
| 2q5cA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 30.0 | 3.48e-01 | 79.5% | 76.3% |
| 3zl8A03 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.53 | 40.0 | 4.03e-01 | 96.2% | 77.0% |
| 4kdcA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 47.0 | 4.03e-01 | 100.0% | 86.2% |
| 2bzgA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 47.0 | 3.96e-01 | 100.0% | 83.8% |
| 3bgvD00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 47.0 | 3.76e-01 | 100.0% | 79.1% |
| 4kq9A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 47.0 | 4.10e-01 | 100.0% | 81.5% |
| 4m1bA00 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.52 | 40.0 | 3.56e-01 | 82.6% | 96.5% |
| 1gvnD00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 43.0 | 3.45e-01 | 90.9% | 63.7% |
| 3cggA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 47.0 | 4.18e-01 | 100.0% | 76.3% |
| 1uejB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 43.0 | 3.68e-01 | 89.4% | 63.3% |
| 3hurA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.51 | 41.0 | 3.51e-01 | 87.1% | 87.0% |
| 1tllA01 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.51 | 38.0 | 3.55e-01 | 80.3% | 71.8% |
| 1a7jA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 42.0 | 3.33e-01 | 90.2% | 51.3% |
| 6eudA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 45.0 | 4.18e-01 | 100.0% | 84.1% |
| 1xxlA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 45.0 | 3.76e-01 | 100.0% | 96.2% |
ECOD (85)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5011495 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.76 | 70.0 | 6.04e-01 | 100.0% | 70.0% |
| 3594982 | 2004.1.1.46 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM | 0.75 | 70.0 | 5.51e-01 | 100.0% | 64.6% |
| 4926850 | 2004.1.1.22 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activat | 0.75 | 70.0 | 6.60e-01 | 100.0% | 85.2% |
| 4998586 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.75 | 70.0 | 5.90e-01 | 100.0% | 62.9% |
| 4542391 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.75 | 69.0 | 5.54e-01 | 100.0% | 62.0% |
| 4195107 | 2004.1.1.58 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase | 0.75 | 69.0 | 5.36e-01 | 100.0% | 70.5% |
| 4940787 | 2004.1.1.46 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM | 0.74 | 69.0 | 5.50e-01 | 100.0% | 70.4% |
| 2810781 | 8001.1.1.1 ↗ | alpha arrays › N-terminal domain of large tumor antigen › N-terminal domain of large tumor antigen › N-terminal domain of large tumor antigen › PPV_E1_C | 0.74 | 68.0 | 5.71e-01 | 100.0% | 64.3% |
| 3253892 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.74 | 68.0 | 5.93e-01 | 100.0% | 75.9% |
| 4941848 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.72 | 67.0 | 4.76e-01 | 100.0% | 36.3% |
| 3952423 | 2004.1.1.339 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF3631 | 0.71 | 65.0 | 5.17e-01 | 100.0% | 59.2% |
| 3469175 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.71 | 65.0 | 5.36e-01 | 100.0% | 87.4% |
| 3602841 | 2004.1.1.66 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase_2 | 0.70 | 65.0 | 5.46e-01 | 100.0% | 90.7% |
| 5006563 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.70 | 63.0 | 5.09e-01 | 100.0% | 77.6% |
| 4016005 | 2004.1.1.189 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 | 0.69 | 63.0 | 5.05e-01 | 100.0% | 69.0% |
| 3283008 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.65 | 55.0 | 4.97e-01 | 89.4% | 88.0% |
| 3288363 | 2004.1.1.189 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 | 0.65 | 60.0 | 5.37e-01 | 100.0% | 94.4% |
| 3287721 | 2004.1.1.189 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 | 0.65 | 59.0 | 5.50e-01 | 100.0% | 97.6% |
| 3963970 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.65 | 59.0 | 4.81e-01 | 100.0% | 81.2% |
| 3427973 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.64 | 58.0 | 5.19e-01 | 100.0% | 77.3% |
| 4547646 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.63 | 50.0 | 4.50e-01 | 100.0% | 61.5% |
| 5069659 | 2004.1.1.1200 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF835 | 0.63 | 56.0 | 5.25e-01 | 98.5% | 93.9% |
| 3515571 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.62 | 52.0 | 4.70e-01 | 89.4% | 89.4% |
| None | — | 0.62 | 53.0 | 4.20e-01 | 100.0% | 45.4% | |
| 3617185 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.62 | 56.0 | 4.29e-01 | 100.0% | 67.5% |
| 3193548 | 7577.1.1.7 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Cys_Met_Meta_PP | 0.62 | 53.0 | 4.15e-01 | 100.0% | 43.9% |
| 4917889 | 7577.1.1.7 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Cys_Met_Meta_PP | 0.62 | 53.0 | 4.30e-01 | 100.0% | 50.0% |
| 3965221 | 7577.1.1.7 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Cys_Met_Meta_PP | 0.62 | 52.0 | 4.25e-01 | 100.0% | 48.8% |
| 3238719 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.61 | 51.0 | 4.47e-01 | 89.4% | 89.2% |
| 3586465 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.61 | 51.0 | 4.44e-01 | 90.9% | 88.3% |
| 4947461 | 7577.1.1.7 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Cys_Met_Meta_PP | 0.61 | 52.0 | 4.02e-01 | 100.0% | 42.1% |
| 3970766 | 7577.1.1.0 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases | 0.61 | 52.0 | 4.15e-01 | 100.0% | 46.9% |
| 3597658 | 7577.1.1.0 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases | 0.61 | 51.0 | 4.12e-01 | 100.0% | 46.5% |
| 5013556 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.61 | 51.0 | 4.58e-01 | 90.2% | 88.3% |
| None | — | 0.61 | 51.0 | 3.98e-01 | 100.0% | 41.4% | |
| 3726369 | 3016.1.1.7 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Cys_Met_Meta_PP | 0.60 | 51.0 | 3.99e-01 | 100.0% | 42.9% |
| 5025723 | 7577.1.1.7 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Cys_Met_Meta_PP | 0.60 | 51.0 | 4.22e-01 | 100.0% | 51.5% |
| 4875452 | 3016.1.1.7 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Cys_Met_Meta_PP | 0.60 | 51.0 | 3.91e-01 | 100.0% | 39.5% |
| 4944067 | 7577.1.1.7 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Cys_Met_Meta_PP | 0.60 | 51.0 | 4.26e-01 | 100.0% | 52.3% |
| 3205525 | 2002.1.1.76 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC | 0.60 | 48.0 | 3.87e-01 | 87.9% | 83.7% |
| 3387744 | 7577.1.1.7 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Cys_Met_Meta_PP | 0.60 | 50.0 | 3.94e-01 | 100.0% | 42.1% |
| 4883773 | 3016.1.1.7 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Cys_Met_Meta_PP | 0.60 | 50.0 | 4.08e-01 | 100.0% | 47.8% |
| 4321959 | 7577.1.1.7 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Cys_Met_Meta_PP | 0.60 | 51.0 | 3.94e-01 | 100.0% | 41.7% |
| 4683273 | 7577.1.1.7 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Cys_Met_Meta_PP | 0.60 | 50.0 | 3.86e-01 | 100.0% | 39.4% |
| 3723636 | 7577.1.1.7 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Cys_Met_Meta_PP | 0.59 | 51.0 | 3.93e-01 | 100.0% | 41.7% |
| None | — | 0.59 | 50.0 | 3.92e-01 | 100.0% | 41.7% | |
| 3261953 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.59 | 52.0 | 4.64e-01 | 100.0% | 67.9% |
| 4548708 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.59 | 41.0 | 4.55e-01 | 87.9% | 90.5% |
| 3918979 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 48.0 | 3.97e-01 | 90.2% | 71.7% |
| 3211161 | 2004.1.1.62 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 | 0.58 | 50.0 | 4.75e-01 | 96.2% | 91.9% |
| 3700283 | 2002.1.1.76 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC | 0.58 | 47.0 | 3.78e-01 | 89.4% | 79.2% |
| 4297795 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.57 | 47.0 | 3.42e-01 | 100.0% | 32.2% |
| 4988870 | 7577.1.1.3 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 | 0.57 | 52.0 | 3.87e-01 | 100.0% | 40.3% |
| 3958365 | 2002.1.1.108 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NMO | 0.57 | 41.0 | 3.91e-01 | 75.0% | 87.1% |
| 3595107 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.57 | 46.0 | 3.73e-01 | 89.4% | 80.4% |
| 3387039 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.56 | 40.0 | 4.14e-01 | 93.2% | 77.6% |
| 5021937 | 2004.1.1.120 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII | 0.56 | 51.0 | 4.74e-01 | 100.0% | 80.6% |
| 4980155 | 2002.1.1.76 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC | 0.56 | 46.0 | 3.71e-01 | 89.4% | 76.7% |
| 4281470 | 7577.1.1.30 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5, KYNU_C | 0.56 | 51.0 | 3.75e-01 | 100.0% | 40.6% |
| 4431149 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.56 | 44.0 | 4.46e-01 | 100.0% | 83.7% |
| 4030983 | 2007.2.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like | 0.55 | 32.0 | 3.47e-01 | 85.6% | 67.6% |
| 4451063 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.55 | 44.0 | 3.23e-01 | 100.0% | 31.5% |
| 4010863 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.55 | 47.0 | 3.70e-01 | 100.0% | 45.2% |
| 3484889 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.55 | 48.0 | 4.44e-01 | 100.0% | 75.8% |
| 3262228 | 2004.1.1.364 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C | 0.54 | 48.0 | 3.29e-01 | 100.0% | 35.5% |
| 4961638 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.54 | 40.0 | 4.09e-01 | 92.4% | 80.8% |
| 4333640 | 2004.1.1.364 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C | 0.54 | 49.0 | 3.30e-01 | 100.0% | 30.9% |
| 3933477 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.54 | 45.0 | 4.19e-01 | 100.0% | 71.2% |
| 3963632 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 48.0 | 3.97e-01 | 100.0% | 91.2% |
| 10918 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.54 | 46.0 | 4.33e-01 | 100.0% | 74.9% |
| 3277496 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 44.0 | 3.42e-01 | 88.6% | 47.9% |
| 5047163 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.53 | 48.0 | 4.14e-01 | 100.0% | 84.3% |
| 3515728 | 2003.1.5.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr | 0.53 | 47.0 | 2.98e-01 | 96.2% | 20.6% |
| 4079080 | 2002.1.1.76 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC | 0.53 | 46.0 | 3.99e-01 | 96.2% | 97.1% |
| 5073258 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.53 | 48.0 | 4.08e-01 | 100.0% | 79.1% |
| 9570 | 2004.1.1.140 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Zeta_toxin | 0.53 | 44.0 | 3.51e-01 | 90.9% | 63.2% |
| 5082913 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.53 | 47.0 | 4.09e-01 | 100.0% | 82.9% |
| 4182051 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.53 | 45.0 | 3.24e-01 | 100.0% | 32.4% |
| 4024654 | 2004.1.1.334 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 43.0 | 3.65e-01 | 89.4% | 88.3% |
| 4930497 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.53 | 38.0 | 3.93e-01 | 93.2% | 80.0% |
| 5036211 | 2002.1.1.25 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like | 0.52 | 47.0 | 3.71e-01 | 100.0% | 75.0% |
| 3632936 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.51 | 46.0 | 3.73e-01 | 100.0% | 52.3% |
| 4384157 | 2002.1.1.76 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC | 0.51 | 46.0 | 3.94e-01 | 100.0% | 83.5% |
| 4971679 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.51 | 45.0 | 3.87e-01 | 100.0% | 80.5% |
| 4178637 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.50 | 45.0 | 3.64e-01 | 100.0% | 53.5% |