replication-associated_protein

Euk-Vir

Pacific_flying_fox_associated_cyclovirus-3

replication-associated_protein__YP_009506302__Pacific_flying_fox_associated_cyclovirus-3__1795985

Identity

90.8 mean pLDDT

Shotokuvirae› Cressdnaviricota› Arfiviricetes› Cirlivirales› Circoviridae› Cyclovirus› Pacific_flying_fox_associated_cyclovirus-3

TaxID: 1795985

View cluster (107 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 160-275

PDB

Domain cluster: rep: replication-associated_protein__YP_009001745__Dragonfly_larvae_associated_circular_virus-5_Viruses.__X__D171-266

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00910.29 best	RNA_helicase	39.7	8.30e-10	76.7%	98.1%

D2 medium residues 5-99

PDB

Domain cluster: rep: replication_associated_protein__YP_009237599__Lake_Sarah-associated_circular_molecule_10_Viruses.__X__D15-119

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02407.23 best	Viral_Rep	63.3	2.90e-17	91.6%	97.6%

D3 medium residues 108-150

PDB

Domain cluster: representative

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4mloA03	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.77	65.0	5.91e-01	100.0%	85.2%
6e6qA00	1.10.10.1100	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › BFD-like [2Fe-2S]-binding domain	0.73	59.0	5.57e-01	97.7%	100.0%
5dukB00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.65	51.0	4.57e-01	95.3%	71.6%
2j5oA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.61	48.0	4.41e-01	97.7%	69.2%