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replication-associated_protein
Euk-VirMaize_striate_mosaic_virus
replication-associated_protein__YP_009551897__Maize_striate_mosaic_virus__2025388
Identity
- Accession:
- YP_009551897 ↗
- Protein ID:
- replication-associated_protein
- Kingdom:
- euk
Quality
84.4
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Repensiviricetes›
Geplafuvirales›
Geminiviridae›
Mastrevirus›
maize_striate_mosaic_virus
TaxID: 2025388
Cluster
View cluster (21 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-116
Domain cluster:
rep: replication-associated_protein__YP_009553348__Odonata-associated_circular_virus-7_Viruses.__X__D5-106
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00799.27 best | Gemini_AL1 | 93.3 | 1.40e-26 | 100.0% | 88.5% |
D2
high
residues 135-178
Domain cluster:
rep: replication_associated_protein__YP_006331073__Maize_streak_Reunion_virus__1182518__D173-216
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 27.8 | 3.20e-06 | 100.0% | 39.2% |
D3
high
residues 199-331
Domain cluster:
rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283