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replication_associated_protein_Rep
Euk-VirHollyhock_leaf_crumple_virus
replication_associated_protein_Rep__NP_665674__Hollyhock_leaf_crumple_virus__199587
Identity
- Accession:
- NP_665674 ↗
- Protein ID:
- replication_associated_protein_Rep
- Kingdom:
- euk
Quality
82.2
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Repensiviricetes›
Geplafuvirales›
Geminiviridae›
Begomovirus›
Hollyhock_leaf_crumple_virus
TaxID: 199587
Cluster
View cluster (491 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-114
Domain cluster:
rep: replication-associated_protein__YP_009553348__Odonata-associated_circular_virus-7_Viruses.__X__D5-106
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00799.27 best | Gemini_AL1 | 181.8 | 4.50e-54 | 100.0% | 92.9% |
D2
high
residues 187-341
Domain cluster:
rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 45.0 | 1.40e-11 | 28.4% | 42.1% |
D3
medium
residues 128-186
Domain cluster:
rep: replication_initiator_protein__YP_009241413__Deinbollia_mosaic_virus__1812308__D128-173
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 60.7 | 1.80e-16 | 100.0% | 54.2% |