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replication_associated_protein
Euk-VirSida_yellow_mottle_virus
replication_associated_protein__YP_004901696__Sida_yellow_mottle_virus__1093958
Identity
- Accession:
- YP_004901696 ↗
- Protein ID:
- replication_associated_protein
- Kingdom:
- euk
Quality
81.4
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Repensiviricetes›
Geplafuvirales›
Geminiviridae›
Begomovirus›
Sida_yellow_mottle_virus
TaxID: 1093958
Cluster
View cluster (491 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-114
Domain cluster:
rep: replication-associated_protein__YP_009553348__Odonata-associated_circular_virus-7_Viruses.__X__D5-106
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00799.27 best | Gemini_AL1 | 199.4 | 1.60e-59 | 100.0% | 92.9% |
D2
high
residues 186-338
Domain cluster:
rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 62.4 | 5.60e-17 | 30.1% | 43.0% |
D3
medium
residues 123-185
Domain cluster:
rep: replication_initiator_protein__YP_009241413__Deinbollia_mosaic_virus__1812308__D128-173
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 72.8 | 3.10e-20 | 95.2% | 55.1% |