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replication_associated_protein
Euk-VirTomato_dwarf_leaf_virus
replication_associated_protein__YP_004958249__Tomato_dwarf_leaf_virus__1195378
Identity
- Accession:
- YP_004958249 ↗
- Protein ID:
- replication_associated_protein
- Kingdom:
- euk
Quality
81.5
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Repensiviricetes›
Geplafuvirales›
Geminiviridae›
Begomovirus›
Tomato_dwarf_leaf_virus
TaxID: 1195378
Cluster
View cluster (491 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-115
Domain cluster:
rep: replication-associated_protein__YP_009553348__Odonata-associated_circular_virus-7_Viruses.__X__D5-106
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00799.27 best | Gemini_AL1 | 200.5 | 7.10e-60 | 100.0% | 92.9% |
D2
high
residues 190-340
Domain cluster:
rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 57.4 | 2.00e-15 | 28.5% | 40.2% |
D3
medium
residues 124-189
Domain cluster:
rep: replication_initiator_protein__YP_009241413__Deinbollia_mosaic_virus__1812308__D128-173
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 67.1 | 1.80e-18 | 95.5% | 57.9% |