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replication_associated_protein

Euk-Vir

Chickpea_chlorosis_Australia_virus

replication_associated_protein__YP_008472704__Chickpea_chlorosis_Australia_virus__1302848

Identity

Accession:
YP_008472704 ↗
Protein ID:
replication_associated_protein
Kingdom:
euk

Quality

83.5 mean pLDDT

Taxonomy

Shotokuvirae› Cressdnaviricota› Repensiviricetes› Geplafuvirales› Geminiviridae› Mastrevirus› Chickpea_chlorosis_Australia_virus

TaxID: 1302848

Cluster

View cluster (491 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-112
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00799.27 best Gemini_AL1 93.7 1.00e-26 100.0% 91.1%
CATH (88)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1l2mA00 3.40.1310.20 Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › 0.86 80.0 7.49e-01 100.0% 88.1%
4kw3A00 3.40.1310.20 Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › 0.81 75.0 5.37e-01 100.0% 89.1%
6h8oA00 3.40.1310.20 Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › 0.80 70.0 7.11e-01 100.0% 94.7%
2hw0A00 3.40.1310.20 Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › 0.78 70.0 6.62e-01 100.0% 82.6%
2x3gA00 3.30.70.1910 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.77 67.0 6.35e-01 94.9% 84.5%
2rhqB06 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.76 55.0 5.93e-01 74.5% 100.0%
3tupA02 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.75 55.0 5.61e-01 76.5% 93.8%
1y7pB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.75 56.0 6.19e-01 80.6% 96.2%
2dgxA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.75 57.0 6.25e-01 79.6% 98.8%
2jwnA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.74 56.0 5.56e-01 79.6% 77.0%
1r9wA00 3.40.1310.10 Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › 0.73 67.0 5.94e-01 100.0% 73.9%
2qmwA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.72 54.0 5.98e-01 80.6% 100.0%
3uebF00 3.30.300.100 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like 0.72 50.0 4.98e-01 71.4% 89.0%
3w7bA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.72 55.0 5.75e-01 80.6% 97.7%
3onqA02 3.30.70.2730 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.71 53.0 5.78e-01 80.6% 95.1%
4djbA00 3.30.70.2870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 0.71 55.0 5.18e-01 82.7% 99.2%
2lqjA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.71 56.0 5.76e-01 85.7% 91.5%
3nrbB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.70 53.0 5.67e-01 79.6% 97.6%
2nyiA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.70 53.0 5.78e-01 81.6% 97.5%
2rrnA01 3.30.70.2040 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 53.0 5.67e-01 80.6% 97.6%
2dt9A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.69 52.0 5.68e-01 80.6% 98.7%
3ibwA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.69 51.0 5.60e-01 80.6% 97.5%
2bvfA03 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.69 62.0 4.86e-01 100.0% 69.5%
3gz7B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 54.0 5.43e-01 83.7% 98.0%
3n0vA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.69 52.0 5.56e-01 80.6% 98.8%
3d3bJ00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.69 52.0 5.48e-01 80.6% 94.3%
3s1tA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.68 52.0 5.63e-01 80.6% 98.8%
3cedA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.68 51.0 5.13e-01 80.6% 78.6%
6gdxA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 53.0 5.16e-01 82.7% 80.4%
1pbuA00 3.30.70.1010 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Translation elongation factor EF1B, gamma chain, conserved domain 0.68 61.0 5.18e-01 100.0% 73.5%
1gh8A00 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.68 52.0 5.47e-01 82.7% 95.5%
3mgjA00 3.30.70.2690 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › LOR/SDH bifunctional enzyme, conserved domain 0.68 52.0 5.30e-01 81.6% 89.6%
1qd1A01 3.30.990.10 Alpha Beta › 2-Layer Sandwich › Formiminotransferase-cyclodeaminase; Chain B, domain 1 › Formiminotransferase, N-terminal subdomain 0.68 52.0 4.26e-01 81.6% 51.7%
3c19A01 3.30.70.1380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transcriptional regulatory protein pf0864 domain like 0.68 52.0 5.26e-01 82.7% 85.9%
2cpxA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.68 51.0 5.55e-01 78.6% 100.0%
2pgcA02 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 53.0 5.18e-01 82.7% 88.7%
1u8sA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.68 54.0 5.69e-01 84.7% 97.7%
2cg8B02 3.30.70.560 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK 0.67 55.0 4.96e-01 87.8% 87.1%
1nbeB01 3.30.70.140 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aspartate carbamoyltransferase regulatory subunit, N-terminal domain 0.67 50.0 5.15e-01 81.6% 82.8%
1p1lA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 52.0 5.17e-01 83.7% 87.3%
2od6C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 53.0 5.15e-01 84.7% 97.2%
3e8oB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 52.0 5.18e-01 82.7% 95.0%
2ca9A02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.67 51.0 5.37e-01 81.6% 91.0%
3o1lB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.66 51.0 5.30e-01 81.6% 94.3%
5yppA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.66 52.0 5.45e-01 88.8% 94.4%
2pd1A01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 51.0 5.17e-01 81.6% 95.8%
5fiiB00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.66 48.0 5.27e-01 78.6% 100.0%
3ce8A00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 51.0 5.34e-01 83.7% 93.3%
3p96A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.65 51.0 5.44e-01 84.7% 100.0%
4dpoB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 50.0 5.01e-01 81.6% 92.1%
2bj3D02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.65 49.0 5.31e-01 80.6% 96.3%
3luyA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.65 51.0 5.31e-01 83.7% 96.6%
1sqeA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 51.0 5.11e-01 84.7% 96.0%
3mwbB03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 51.0 5.16e-01 83.7% 89.5%
4ushA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 50.0 4.94e-01 83.7% 80.6%
1iujA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 50.0 4.98e-01 83.7% 97.1%
1tz0B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 50.0 5.10e-01 84.7% 94.8%
4qjvB00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.64 44.0 4.48e-01 70.4% 73.4%
4dzdA01 3.30.70.1200 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 1 0.64 43.0 4.88e-01 81.6% 97.1%
5t0oA02 3.30.70.1430 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain 0.63 57.0 5.67e-01 99.0% 98.1%
2ogkD00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.63 47.0 4.24e-01 80.6% 84.5%
3aawA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.63 51.0 4.40e-01 90.8% 71.5%
1q5yC00 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.63 48.0 5.16e-01 80.6% 97.6%
2nrqA00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.63 47.0 4.27e-01 80.6% 86.9%
1a7gE00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.63 48.0 5.10e-01 82.7% 98.8%
6x4tA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 45.0 4.85e-01 76.5% 96.5%
3lo3A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 47.0 4.81e-01 80.6% 96.8%
2nzcB00 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.62 46.0 4.93e-01 81.6% 96.3%
3c1mA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.62 54.0 4.61e-01 98.0% 73.8%
4za1C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 48.0 4.99e-01 83.7% 95.7%
3d2uA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 45.0 4.64e-01 76.5% 89.1%
3r8jA00 3.20.80.10 Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain 0.61 54.0 4.47e-01 99.0% 77.8%
6vh5C03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.61 50.0 5.22e-01 99.0% 98.9%
2fiuA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 47.0 4.78e-01 82.7% 97.9%
4bfeA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 43.0 4.72e-01 80.6% 91.4%
1yg9A01 2.60.40.1960 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 37.0 4.21e-01 98.0% 82.4%
4e8dA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 45.0 4.05e-01 80.6% 78.3%
4ud8A03 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.59 53.0 4.33e-01 100.0% 67.9%
3vteA03 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.59 53.0 4.28e-01 100.0% 68.6%
2govA01 3.20.80.10 Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain 0.58 51.0 4.30e-01 100.0% 78.0%
4dmzA02 3.30.70.2880 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 50.0 4.52e-01 98.0% 81.8%
4dn9B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 51.0 5.20e-01 100.0% 99.0%
5d79A03 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.57 51.0 4.13e-01 100.0% 66.3%
3kkfA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 50.0 4.91e-01 99.0% 95.2%
1ug8A00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.55 32.0 3.42e-01 82.7% 64.4%
7zhdA01 3.20.80.10 Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain 0.53 47.0 4.17e-01 99.0% 81.0%
2raaA00 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.53 38.0 3.20e-01 74.5% 75.3%
7r3eB02 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.50 43.0 3.62e-01 92.9% 76.1%
ECOD (98)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2966256 304.55.1.1 ↗ a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Gemini_AL1 0.97 94.0 9.00e-01 100.0% 92.6%
4218099 304.55.1.1 ↗ a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Gemini_AL1 0.96 92.0 8.09e-01 100.0% 92.6%
2714493 304.55.1.1 ↗ a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Gemini_AL1 0.93 89.0 8.34e-01 100.0% 90.5%
2391478 304.55.1.5 ↗ a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Viral_Rep 0.80 70.0 7.11e-01 100.0% 94.7%
3377701 304.8.1.23 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Helitron_like_N 0.80 73.0 5.60e-01 99.0% 88.1%
None — 0.80 73.0 5.34e-01 99.0% 83.7%
3926520 304.8.1.23 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Helitron_like_N 0.79 72.0 5.69e-01 98.0% 87.4%
3937809 304.55.1.15 ↗ a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Helitron_like_N 0.79 72.0 5.76e-01 99.0% 87.8%
2796430 304.55.1.5 ↗ a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Viral_Rep 0.79 70.0 6.94e-01 100.0% 91.3%
3372454 304.55.1.20 ↗ a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Helitron_like_N, REP_ORF2-G2P 0.79 71.0 5.38e-01 99.0% 88.4%
4304749 304.8.1.81 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › REP_ORF2-G2P 0.77 70.0 5.11e-01 100.0% 52.3%
3778963 304.18.1.1 ↗ a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB 0.77 55.0 5.14e-01 74.5% 73.3%
139956 304.8.1.16 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › 117-like_vir 0.77 67.0 6.35e-01 94.9% 84.5%
4403284 304.18.1.1 ↗ a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB 0.76 55.0 5.55e-01 75.5% 88.0%
4133039 304.8.1.81 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › REP_ORF2-G2P 0.76 69.0 5.76e-01 99.0% 86.7%
4001719 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.76 63.0 6.41e-01 87.8% 93.7%
4096709 304.18.1.1 ↗ a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB 0.75 55.0 5.64e-01 76.5% 93.7%
3284477 304.12.1.2 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MgtC_SapB_C 0.74 57.0 6.08e-01 80.6% 100.0%
3941895 304.8.1.43 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_5 0.74 53.0 5.99e-01 78.6% 97.3%
3464795 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.74 61.0 5.69e-01 87.8% 79.2%
4994637 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.74 54.0 5.44e-01 80.6% 75.0%
3675857 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.74 58.0 4.68e-01 83.7% 47.6%
3824051 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.73 59.0 5.83e-01 87.8% 80.0%
5039693 304.16.1.1 ↗ a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.73 57.0 5.95e-01 82.7% 97.8%
4060458 304.8.1.22 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › AHAS-like_ACT 0.73 56.0 6.11e-01 82.7% 98.8%
3439268 304.9.1.6 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Smg4_UPF3 0.73 60.0 5.40e-01 86.7% 71.5%
4999740 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.73 54.0 6.02e-01 77.6% 100.0%
3970813 304.12.1.0 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 0.73 57.0 5.87e-01 82.7% 92.6%
3952856 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.73 56.0 5.64e-01 81.6% 83.0%
4170481 304.16.1.1 ↗ a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.72 56.0 5.80e-01 81.6% 94.4%
5042991 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.72 53.0 5.95e-01 76.5% 100.0%
3425342 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.72 50.0 5.60e-01 71.4% 97.3%
3210164 304.44.1.1 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 0.72 54.0 4.63e-01 79.6% 54.2%
4949247 304.8.1.22 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › AHAS-like_ACT 0.72 55.0 6.01e-01 82.7% 100.0%
4957999 304.8.1.22 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › AHAS-like_ACT 0.71 55.0 5.64e-01 82.7% 87.4%
3838844 304.18.1.1 ↗ a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB 0.71 52.0 5.33e-01 76.5% 93.6%
4051078 304.4.1.71 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF4937 0.71 63.0 6.02e-01 99.0% 100.0%
330634 304.16.1.1 ↗ a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.71 55.0 5.71e-01 81.6% 91.2%
5026422 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.71 52.0 4.97e-01 80.6% 66.1%
5065805 304.8.1.22 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › AHAS-like_ACT 0.71 56.0 6.02e-01 87.8% 97.6%
4944755 304.130.1.1 ↗ a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.71 53.0 5.54e-01 82.7% 86.7%
148700 304.12.1.2 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MgtC_SapB_C 0.71 56.0 5.76e-01 85.7% 91.5%
4967300 304.130.1.1 ↗ a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.70 52.0 5.54e-01 81.6% 90.6%
4033481 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.70 53.0 5.54e-01 80.6% 90.0%
5050897 304.130.1.1 ↗ a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.70 53.0 5.59e-01 82.7% 91.8%
5028585 304.16.1.1 ↗ a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.70 53.0 5.69e-01 80.6% 96.5%
3971355 304.12.1.2 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MgtC_SapB_C 0.70 52.0 5.54e-01 79.6% 96.5%
4206173 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.70 53.0 5.50e-01 80.6% 90.0%
4954911 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.70 52.0 5.52e-01 80.6% 91.8%
3231798 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.69 55.0 5.58e-01 84.7% 87.4%
4947614 304.130.1.1 ↗ a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.69 53.0 5.50e-01 83.7% 87.8%
5022932 304.130.1.1 ↗ a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.69 54.0 5.76e-01 83.7% 97.6%
3388014 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.69 53.0 5.77e-01 80.6% 98.8%
4968326 304.16.1.1 ↗ a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.69 54.0 5.72e-01 81.6% 94.1%
5023983 304.130.1.1 ↗ a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.69 52.0 5.22e-01 81.6% 85.0%
3732356 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.69 55.0 4.73e-01 86.7% 74.2%
3604508 304.8.1.4 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.69 52.0 5.40e-01 80.6% 90.0%
None — 0.68 52.0 5.29e-01 81.6% 84.7%
4039920 304.130.1.1 ↗ a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.68 52.0 5.42e-01 82.7% 88.9%
4540833 304.28.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.68 51.0 5.42e-01 79.6% 97.6%
4622719 304.6.1.0 ↗ a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain 0.68 62.0 4.66e-01 100.0% 62.2%
5046778 304.130.1.1 ↗ a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.68 52.0 5.22e-01 82.7% 80.0%
3786175 304.46.1.1 ↗ a+b two layers › Alpha-beta plaits › eEF1-gamma domain › eEF1-gamma domain › EF1G 0.68 62.0 5.20e-01 100.0% 73.0%
3805519 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.68 52.0 5.51e-01 81.6% 96.5%
3386856 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.68 52.0 5.47e-01 81.6% 96.5%
3344220 304.9.1.96 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF26250 0.68 61.0 6.10e-01 100.0% 96.0%
3818108 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.68 58.0 5.31e-01 93.9% 70.8%
4116209 304.130.1.1 ↗ a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.68 51.0 5.34e-01 82.7% 88.9%
4664239 304.130.1.1 ↗ a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.68 52.0 5.38e-01 83.7% 88.9%
3546120 304.9.1.66 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PNMA_N 0.68 51.0 5.13e-01 80.6% 80.0%
4951741 304.130.1.1 ↗ a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.68 52.0 5.43e-01 83.7% 90.0%
4184306 304.130.1.1 ↗ a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.68 51.0 5.34e-01 83.7% 88.9%
4201490 304.130.1.1 ↗ a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.67 51.0 5.33e-01 83.7% 88.9%
4540169 304.8.1.8 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 0.67 52.0 5.51e-01 82.7% 100.0%
5071161 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.67 51.0 4.88e-01 81.6% 69.6%
3313723 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.67 52.0 5.27e-01 82.7% 88.4%
5078835 304.6.1.1 ↗ a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C 0.66 59.0 4.46e-01 100.0% 65.0%
4594531 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.66 50.0 5.27e-01 80.6% 91.0%
5049083 304.37.1.0 ↗ a+b two layers › Alpha-beta plaits › Sulfite reductase, domains 1 and 3 › Sulfite reductase, domains 1 and 3 0.66 55.0 4.09e-01 89.8% 43.7%
4977318 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.66 49.0 5.10e-01 80.6% 92.2%
3586613 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.66 51.0 5.41e-01 84.7% 95.3%
4013989 304.6.1.0 ↗ a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain 0.65 59.0 4.39e-01 100.0% 56.6%
4946218 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.65 53.0 5.23e-01 87.8% 82.9%
5042110 882.1.1.4 ↗ a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.65 49.0 4.36e-01 79.6% 87.1%
4947578 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.65 51.0 5.20e-01 83.7% 92.6%
3585521 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.65 49.0 5.30e-01 79.6% 98.8%
1786499 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.65 51.0 4.69e-01 83.7% 67.7%
4043242 304.6.1.5 ↗ a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › Cytokin-bind 0.65 57.0 4.36e-01 100.0% 60.4%
4309132 304.6.1.0 ↗ a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain 0.64 57.0 4.32e-01 100.0% 59.2%
3279556 304.6.1.5 ↗ a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › Cytokin-bind 0.64 57.0 4.27e-01 100.0% 57.6%
4934880 882.1.1.4 ↗ a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.64 48.0 4.29e-01 79.6% 87.7%
3342333 304.28.1.10 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Helitron_like_N 0.64 58.0 4.70e-01 99.0% 70.8%
3943490 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 48.0 5.06e-01 80.6% 92.9%
5046142 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.63 51.0 5.23e-01 86.7% 91.6%
2771056 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.62 48.0 4.86e-01 83.7% 90.6%
3201008 2003.1.5.368 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PCMT, WBS_methylT, Methyltransf_25 0.58 43.0 3.15e-01 100.0% 27.5%
4959304 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.58 52.0 4.90e-01 100.0% 95.0%
4400469 101.1.2.841 ↗ alpha arrays › HTH › HTH › winged helix domain › PF27221 0.53 47.0 4.07e-01 100.0% 74.7%
D2 high residues 123-167
PDB
Domain cluster: rep: replication_associated_protein__YP_006331073__Maize_streak_Reunion_virus__1182518__D173-216
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08283.17 best Gemini_AL1_M 37.7 2.60e-09 100.0% 40.2%
D3 high residues 181-322
PDB
Domain cluster: rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283