←Back to structures
replication_associated_protein
Euk-VirLake_Sarah-associated_circular_virus-32_Viruses.
replication_associated_protein__YP_009237500__Lake_Sarah-associated_circular_virus-32_Viruses.__X
Identity
- Accession:
- YP_009237500 ↗
- Protein ID:
- replication_associated_protein
- Kingdom:
- euk
Quality
76.9
mean pLDDT
Cluster
View cluster (107 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 209-349
Domain cluster:
rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00910.29 best | RNA_helicase | 33.5 | 7.20e-08 | 61.7% | 98.1% |
D2
medium
residues 47-139
Domain cluster:
rep: replication_associated_protein__YP_009237599__Lake_Sarah-associated_circular_molecule_10_Viruses.__X__D15-119
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02407.23 best | Viral_Rep | 80.0 | 1.80e-22 | 92.5% | 98.8% |
D3
medium
residues 145-197
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4h63H01 | 1.20.58.1710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.80 | 55.0 | 4.90e-01 | 71.7% | 58.3% |
| 2wgmA01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.72 | 48.0 | 4.15e-01 | 73.6% | 45.1% |