replication_associated_protein

Euk-Vir

Lake_Sarah-associated_circular_virus-38_Viruses.

replication_associated_protein__YP_009237533__Lake_Sarah-associated_circular_virus-38_Viruses.__X

Identity

83.1 mean pLDDT

View cluster (107 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-99

PDB

Domain cluster: rep: replication_associated_protein__YP_009237599__Lake_Sarah-associated_circular_molecule_10_Viruses.__X__D15-119

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02407.23 best	Viral_Rep	55.1	1.00e-14	91.6%	98.8%

D2 medium residues 113-151

PDB

Domain cluster: representative

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2vxgA01	6.10.140.270	Special › Helix non-globular › Helix Hairpins ›	0.69	55.0	5.29e-01	89.7%	93.5%
2dofA00	1.10.10.440	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain	0.65	53.0	4.30e-01	100.0%	69.4%
3d6jA02	1.10.150.240	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2	0.56	39.0	3.42e-01	76.9%	62.7%
2jrmA00	1.10.10.620	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ribosome modulation factor like domain	0.55	43.0	3.94e-01	100.0%	73.3%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3945210	101.1.6.25 ↗	alpha arrays › HTH › HTH › TrpR › DUF2857	0.66	56.0	5.58e-01	97.4%	100.0%

D3 medium residues 204-289

PDB

Domain cluster: rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283