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replication_associated_protein

Euk-Vir

Lake_Sarah-associated_circular_virus-17_Viruses.

replication_associated_protein__YP_009237536__Lake_Sarah-associated_circular_virus-17_Viruses.__X

Identity

Accession:
YP_009237536 ↗
Protein ID:
replication_associated_protein
Kingdom:
euk

Quality

75.6 mean pLDDT

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-104
PDB
Domain cluster: rep: replication-associated_protein__YP_009551390__Fly_associated_circular_virus_6__2293286__D5-105
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02407.23 best Viral_Rep 54.5 1.60e-14 83.2% 76.8%
D2 high residues 116-157
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xuaA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.62 46.0 2.91e-01 88.1% 16.5%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3648076 2004.1.1.56 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.50 39.0 2.60e-01 88.1% 20.0%
D3 high residues 167-283
PDB
Domain cluster: rep: replication-associated_protein__YP_009001745__Dragonfly_larvae_associated_circular_virus-5_Viruses.__X__D171-266