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replication_associated_protein
Euk-VirLake_Sarah-associated_circular_virus-29_Viruses.
replication_associated_protein__YP_009237571__Lake_Sarah-associated_circular_virus-29_Viruses.__X
Identity
- Accession:
- YP_009237571 ↗
- Protein ID:
- replication_associated_protein
- Kingdom:
- euk
Quality
71.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 162-255
D2
medium
residues 11-148
Domain cluster:
rep: putative_replication_initiation_protein__YP_009163897__Petrochirus_diogenes_giant_hermit_crab_associated_circular_virus__1692261__D7-150
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qvnA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.57 | 33.0 | 3.60e-01 | 99.3% | 65.8% |
| 2bvfA03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.51 | 45.0 | 3.96e-01 | 98.6% | 86.2% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3735269 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.51 | 45.0 | 3.72e-01 | 98.6% | 75.8% |
| 3166677 | 3792.1.1.0 ↗ | beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain | 0.50 | 26.0 | 3.31e-01 | 84.8% | 83.5% |