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replication_associated_protein
Euk-VirSugarcane_striate_virus
replication_associated_protein__YP_009389276__Sugarcane_striate_virus__1868659
Identity
- Accession:
- YP_009389276 ↗
- Protein ID:
- replication_associated_protein
- Kingdom:
- euk
Quality
77.7
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Repensiviricetes›
Geplafuvirales›
Geminiviridae›
Mastrevirus›
Sugarcane_striate_virus
TaxID: 1868659
Cluster
View cluster (21 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 52-154
Domain cluster:
rep: replication_associated_protein__YP_008472704__Chickpea_chlorosis_Australia_virus__1302848__D15-112
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00799.27 best | Gemini_AL1 | 87.5 | 9.00e-25 | 100.0% | 92.9% |
D2
high
residues 178-217
Domain cluster:
rep: replication_associated_protein__YP_006331073__Maize_streak_Reunion_virus__1182518__D173-216
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 27.9 | 2.90e-06 | 100.0% | 34.6% |
D3
high
residues 239-374
Domain cluster:
rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283