reverse_transcriptase_p51_subunit

Euk-Vir

Human_immunodeficiency_virus_1

reverse_transcriptase_p51_subunit__NP_789739__Human_immunodeficiency_virus_1__11676

Identity

82.7 mean pLDDT

Pararnavirae› Artverviricota› Revtraviricetes› Ortervirales› Retroviridae› Lentivirus› Human_immunodeficiency_virus_1

TaxID: 11676

View cluster (4 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 97-113_158-232

PDB

Domain cluster: rep: hypothetical_protein_2__YP_009345057__Xinzhou_nematode_virus_7__1923775__D238-258_337-401

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00078.33 best	RVT_1	44.1	3.20e-11	96.7%	38.0%

D2 high residues 254-316

PDB

Domain cluster: rep: p66_subunit__NP_705927__Human_immunodeficiency_virus_1__11676__D252-315

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06817.20 best	RVT_thumb	70.5	1.20e-19	81.0%	78.8%

D3 high residues 321-408

PDB

Domain cluster: rep: p15NC-p14PR-p95RT_IN__NP_955619__Human_T-cell_leukemia_virus_type_I__11908__D551-648

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06815.20 best	RVT_connect	129.2	7.90e-38	100.0%	86.3%

D4 medium residues 1-90_116-157

PDB

Domain cluster: rep: pol_protein,_partial__YP_002308474__Simian_T-cell_lymphotropic_virus_6__481147__D16-81_108-143

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00078.33 best	RVT_1	35.4	1.50e-08	33.3%	24.5%