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rh105
Euk-VirMacacine_betaherpesvirus_3
rh105__YP_068198__Macacine_betaherpesvirus_3__47929
Identity
- Accession:
- YP_068198 ↗
- Protein ID:
- rh105
- Kingdom:
- euk
Quality
73.3
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Cytomegalovirus›
macacine_betaherpesvirus_3
TaxID: 47929
Cluster
View cluster (60 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-182
Domain cluster:
rep: E76__YP_007016474__Murid_betaherpesvirus_8__1261657__D6-192
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01646.24 best | Herpes_UL24 | 166.7 | 6.30e-49 | 99.4% | 93.1% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ob8A00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.73 | 41.0 | 4.80e-01 | 84.3% | 78.2% |
| 3fovA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.71 | 43.0 | 5.40e-01 | 82.6% | 100.0% |
| 1y88A01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.69 | 42.0 | 4.87e-01 | 83.1% | 82.4% |
| 2qx2A00 | 3.10.570.10 | Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain | 0.62 | 50.0 | 4.06e-01 | 84.3% | 62.3% |
| 6p4wB01 | 3.40.91.30 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.61 | 38.0 | 4.65e-01 | 79.1% | 97.2% |
| 1dmuA00 | 3.40.600.20 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › Restriction endonuclease BglI | 0.58 | 50.0 | 4.12e-01 | 91.9% | 58.2% |
| 3l0aA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.57 | 49.0 | 4.23e-01 | 91.3% | 68.0% |
| 3syyA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.57 | 46.0 | 4.40e-01 | 91.9% | 74.2% |
| 5veoA01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.53 | 39.0 | 3.33e-01 | 74.4% | 68.5% |
| 6r77A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.53 | 37.0 | 3.85e-01 | 71.5% | 94.6% |
| 1tx3D00 | 3.40.600.10 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › DNA mismatch repair MutH/Restriction endonuclease, type II | 0.53 | 44.0 | 3.85e-01 | 86.6% | 79.1% |
| 2i9xA00 | 3.30.1120.40 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Stage V sporulation protein G | 0.53 | 25.0 | 3.34e-01 | 86.0% | 86.0% |
| 3a52A01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.52 | 37.0 | 3.08e-01 | 73.3% | 74.0% |
| 6j7cA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.51 | 36.0 | 3.68e-01 | 71.5% | 94.5% |
| 1d02B00 | 3.40.580.10 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RI Endonuclease; Chain A › Eco RI Endonuclease, subunit A | 0.51 | 40.0 | 3.84e-01 | 82.6% | 88.0% |
| 3g7kB02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.50 | 35.0 | 3.51e-01 | 71.5% | 98.3% |
| 3bt7A02 | 2.40.50.1070 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 34.0 | 3.65e-01 | 83.1% | 80.0% |
| 7kw0A02 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.50 | 29.0 | 3.01e-01 | 74.4% | 58.9% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3594135 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.77 | 46.0 | 5.86e-01 | 81.4% | 100.0% |
| 4311371 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.73 | 49.0 | 5.80e-01 | 86.6% | 98.3% |
| 4238882 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.71 | 48.0 | 5.62e-01 | 87.8% | 98.3% |
| 4459358 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.71 | 48.0 | 5.67e-01 | 87.2% | 99.2% |
| 4620724 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.70 | 48.0 | 5.62e-01 | 86.0% | 98.3% |
| 4397425 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.70 | 44.0 | 5.45e-01 | 81.4% | 100.0% |
| 4329875 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.70 | 50.0 | 5.74e-01 | 87.8% | 100.0% |
| 3965872 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.69 | 60.0 | 5.04e-01 | 92.4% | 83.5% |
| 4196390 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.69 | 47.0 | 5.27e-01 | 85.5% | 88.1% |
| 4534629 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.69 | 47.0 | 5.54e-01 | 83.7% | 100.0% |
| 5070502 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.68 | 46.0 | 5.00e-01 | 82.6% | 81.4% |
| 4336254 | 2008.1.1.97 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Exo5 | 0.65 | 57.0 | 4.16e-01 | 91.9% | 78.6% |
| 4651551 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.64 | 48.0 | 5.33e-01 | 84.3% | 97.8% |
| 4036845 | 2008.1.1.97 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Exo5 | 0.63 | 55.0 | 4.55e-01 | 91.9% | 65.3% |
| 4022097 | 2008.1.1.97 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Exo5 | 0.62 | 55.0 | 4.56e-01 | 91.3% | 71.6% |
| 5077023 | 2008.1.1.5 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NucS_C | 0.62 | 51.0 | 5.27e-01 | 86.0% | 98.2% |
| 4965092 | 2008.1.1.228 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF5787 | 0.62 | 50.0 | 4.69e-01 | 92.4% | 69.9% |
| 5076295 | 2008.1.1.107 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD | 0.62 | 47.0 | 5.26e-01 | 83.1% | 100.0% |
| 4175597 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.62 | 54.0 | 4.06e-01 | 92.4% | 75.1% |
| 3369565 | 2008.1.1.97 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Exo5 | 0.62 | 54.0 | 4.74e-01 | 91.3% | 88.0% |
| 4958249 | 2008.1.1.97 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Exo5 | 0.62 | 54.0 | 4.64e-01 | 91.3% | 74.5% |
| 3555330 | 2008.1.1.97 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Exo5 | 0.61 | 54.0 | 4.44e-01 | 91.3% | 78.6% |
| 3838560 | 2008.1.1.78 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_endonuc | 0.61 | 49.0 | 4.67e-01 | 83.7% | 72.8% |
| 4239877 | 2008.1.1.97 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Exo5 | 0.61 | 53.0 | 4.22e-01 | 91.3% | 61.3% |
| 4225517 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.60 | 51.0 | 4.70e-01 | 89.5% | 95.0% |
| None | — | 0.60 | 52.0 | 4.24e-01 | 91.3% | 68.5% | |
| 4956304 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 48.0 | 4.59e-01 | 85.5% | 71.5% |
| 4313486 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.60 | 47.0 | 5.12e-01 | 82.0% | 99.3% |
| 3284582 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.60 | 41.0 | 4.39e-01 | 85.5% | 79.3% |
| 5067190 | 2008.1.1.5 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NucS_C | 0.60 | 48.0 | 5.07e-01 | 84.3% | 96.8% |
| None | — | 0.59 | 51.0 | 4.24e-01 | 91.3% | 61.2% | |
| 3589020 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.59 | 46.0 | 4.96e-01 | 94.8% | 94.0% |
| 5081086 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.59 | 40.0 | 4.34e-01 | 86.0% | 81.4% |
| 4409039 | 2008.1.1.207 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_7 | 0.59 | 49.0 | 4.47e-01 | 86.6% | 80.5% |
| 5006562 | 2008.1.1.178 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NA-iREase1 | 0.58 | 48.0 | 5.03e-01 | 85.5% | 98.7% |
| 5013017 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.58 | 47.0 | 4.94e-01 | 83.7% | 98.1% |
| 3194723 | 2008.1.1.97 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Exo5 | 0.58 | 49.0 | 3.90e-01 | 90.1% | 75.8% |
| 3207085 | 2008.1.1.82 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RRG7 | 0.57 | 44.0 | 4.16e-01 | 86.6% | 68.5% |
| 3743329 | 2008.1.1.82 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RRG7 | 0.56 | 43.0 | 4.24e-01 | 89.0% | 76.1% |
| 3371022 | 2008.6.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central | 0.56 | 41.0 | 3.71e-01 | 76.7% | 80.8% |
| 3964769 | 2008.1.1.78 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_endonuc | 0.55 | 42.0 | 4.18e-01 | 82.6% | 75.0% |
| 5005553 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.55 | 48.0 | 4.07e-01 | 91.3% | 78.9% |
| 5016947 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.55 | 44.0 | 4.20e-01 | 86.6% | 71.0% |
| 1933281 | 4126.1.1.3 ↗ | a/b three-layered sandwiches › beta-carbonic anhydrase-like › beta-carbonic anhydrase › beta-carbonic anhydrase › LCIB_C_CA | 0.55 | 45.0 | 4.11e-01 | 86.6% | 75.1% |
| 3170444 | 2008.6.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central | 0.54 | 41.0 | 3.94e-01 | 79.7% | 76.5% |
| 4481698 | 2008.1.1.106 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HamA | 0.54 | 43.0 | 3.92e-01 | 85.5% | 66.2% |
| 3258444 | 63.1.1.0 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain | 0.52 | 34.0 | 3.67e-01 | 91.9% | 79.1% |
| 4029225 | 246.3.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like | 0.50 | 42.0 | 3.21e-01 | 89.0% | 70.3% |