rh106

Euk-Vir

Macacine_betaherpesvirus_3

rh106__YP_068199__Macacine_betaherpesvirus_3__47929

Identity

76.2 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Cytomegalovirus› macacine_betaherpesvirus_3

TaxID: 47929

View cluster (77 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 145-176_217-238

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01499.22 best	Herpes_UL25	26.1	4.70e-06	68.5%	4.9%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5ja1B00	3.90.820.10	Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id	0.56	35.0	3.32e-01	72.2%	51.5%
2e1mA05	1.10.405.10	Mainly Alpha › Orthogonal Bundle › Guanine Nucleotide Dissociation Inhibitor; domain 1 › Guanine Nucleotide Dissociation Inhibitor, domain 1	0.50	36.0	3.12e-01	77.8%	70.3%
1i3zA00	3.30.505.10	Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain	0.50	36.0	2.96e-01	87.0%	40.8%
5c9iD01	1.10.439.10	Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Penicillin Amidohydrolase, domain 1	0.50	37.0	2.81e-01	85.2%	92.5%

D2 medium residues 177-216_474-595

PDB

Domain cluster: rep: DNA_packaging_tegument_protein_UL25__YP_009054940__Equid_alphaherpesvirus_3__80341__D158-233_380-417_449-491_503-595

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01499.22 best	Herpes_UL25	68.6	5.90e-19	69.1%	17.8%

D3 medium residues 239-412_449-473

PDB

Domain cluster: rep: DNA_packaging_tegument_protein_UL25__YP_073790__Human_betaherpesvirus_7__10372__D209-378

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01499.22 best	Herpes_UL25	135.2	4.20e-39	87.9%	28.5%