rh134

Euk-Vir

Macacine_betaherpesvirus_3

rh134__YP_068225__Macacine_betaherpesvirus_3__47929

Identity

79.4 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Cytomegalovirus› macacine_betaherpesvirus_3

TaxID: 47929

View cluster (76 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-148

PDB

Domain cluster: rep: GP98__YP_007417864__Caviid_betaherpesvirus_2__33706__D55-187

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01771.24 best	Viral_alk_exo	27.9	1.40e-06	94.3%	20.8%

D2 medium residues 194-272_307-361_430-468

PDB

Domain cluster: rep: deoxyribonuclease__YP_443858__Papiine_alphaherpesvirus_2__340907__D355-603

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01771.24 best	Viral_alk_exo	77.5	1.30e-21	46.2%	16.3%
PF01771.24	Viral_alk_exo	28.7	8.00e-07	31.8%	11.3%
PF01771.24	Viral_alk_exo	30.9	1.70e-07	24.3%	6.1%

D3 medium residues 510-548

PDB

Domain cluster: representative

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4kq9A02	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.70	55.0	3.53e-01	100.0%	17.5%
5fmgG00	3.60.20.10	Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain	0.68	58.0	3.65e-01	100.0%	39.7%
6muwB00	3.60.20.10	Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain	0.68	59.0	3.66e-01	100.0%	37.6%
2px7A00	3.90.550.10	Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	0.54	47.0	2.96e-01	97.4%	50.7%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4117911	6130.1.1.1 ↗	alpha complex topology › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Se-cys_synth_N	0.81	68.0	5.33e-01	92.3%	55.0%
1563569	109.4.1.1264 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_16	0.78	65.0	3.72e-01	100.0%	9.6%
3961640	267.1.1.0 ↗	a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain	0.78	56.0	3.42e-01	76.9%	13.3%
4103780	102.1.1.10 ↗	alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2	0.68	60.0	3.78e-01	100.0%	20.0%
None	—		0.63	48.0	3.01e-01	87.2%	48.9%