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rh164

Euk-Vir

Macacine_betaherpesvirus_3

rh164__YP_068253__Macacine_betaherpesvirus_3__47929

Identity

Accession:: YP_068253 ↗
Protein ID:: rh164
Kingdom:: euk

Quality

60.3 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Cytomegalovirus› macacine_betaherpesvirus_3

TaxID: 47929

Cluster

View cluster (15 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 106-211

PDB

Domain cluster: rep: CR1-beta__YP_009174206__Simian_adenovirus_19__38416__D15-120

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF16758.12 best	UL141	114.7	6.10e-33	100.0%	55.0%

D2 high residues 213-290

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF16758.12 best	UL141	59.2	6.80e-16	100.0%	41.4%

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1vw4L01	3.90.1030.10	Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17	0.59	43.0	3.58e-01	76.9%	74.1%
2l03A00	2.10.60.10	Mainly Beta › Ribbon › CD59 › CD59	0.57	35.0	3.60e-01	78.2%	63.5%
2esnA02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.56	36.0	3.28e-01	85.9%	46.8%
4rpoA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.54	36.0	3.15e-01	87.2%	44.9%
2veaA02	3.30.450.20	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain	0.53	44.0	3.75e-01	92.3%	90.8%
3i24B00	3.30.428.10	Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like	0.53	46.0	3.88e-01	100.0%	77.7%
1ug8A00	3.30.1370.50	Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain	0.53	34.0	3.34e-01	74.4%	59.8%
1t02A02	3.90.770.10	Alpha Beta › Alpha-Beta Complex › 3-hydroxy-3-methylglutaryl-coenzyme A Reductase; Chain A, domain 2 › 3-hydroxy-3-methylglutaryl-coenzyme A Reductase; Chain A, domain 2	0.52	41.0	2.95e-01	89.7%	74.1%
2j3tD01	3.30.450.70	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase ›	0.51	43.0	3.60e-01	92.3%	85.1%
4y2fA00	3.30.450.40	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain	0.51	40.0	3.37e-01	87.2%	67.1%
2w2sA00	3.10.460.20	Alpha Beta › Roll › VSV matrix protein › Rhabdovirus matrix protein M2	0.51	36.0	2.93e-01	75.6%	73.0%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4881486	11.1.1.220 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › UL141	0.82	75.0	5.30e-01	100.0%	35.7%
3332978	2003.1.5.66 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11	0.62	39.0	2.70e-01	75.6%	19.6%
4832852	218.3.1.1 ↗	a+b two layers › Enolase-N/ribosomal protein › Prokaryotic ribosomal protein L17 › Prokaryotic ribosomal protein L17 › Ribosomal_L17	0.60	44.0	3.71e-01	78.2%	68.1%
3597859	320.1.1.0 ↗	a+b two layers › R3H domain-like › R3H domain › R3H domain	0.57	36.0	3.09e-01	73.1%	40.8%
3758728	382.1.1.0 ↗	few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like	0.56	38.0	3.58e-01	74.4%	56.0%
3790807	382.1.1.0 ↗	few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like	0.56	38.0	3.86e-01	85.9%	70.0%
3887625	382.1.1.4 ↗	few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › ecTbetaR2	0.55	42.0	3.84e-01	82.1%	73.3%
3734118	223.2.1.9 ↗	a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N	0.55	45.0	3.57e-01	93.6%	96.5%
3249650	2003.1.5.66 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11	0.54	37.0	2.77e-01	82.1%	26.5%
4009022	223.1.1.0 ↗	a+b three layers › Profilin-like › sensor domains › sensor domains	0.52	41.0	3.36e-01	87.2%	58.1%