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rh50
Euk-VirMacacine_betaherpesvirus_3
rh50__YP_068144__Macacine_betaherpesvirus_3__47929
Identity
- Accession:
- YP_068144 ↗
- Protein ID:
- rh50
- Kingdom:
- euk
Quality
80.7
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Cytomegalovirus›
macacine_betaherpesvirus_3
TaxID: 47929
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-140
Domain cluster:
rep: protein_U95__YP_073826__Human_betaherpesvirus_7__10372__D619-769
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02393.22 best | US22 | 68.4 | 8.60e-19 | 93.2% | 93.5% |
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fr9A00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 48.0 | 4.57e-01 | 80.5% | 68.8% |
| 1v5rA00 | 3.30.920.20 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Gas2-like domain | 0.58 | 34.0 | 3.78e-01 | 99.2% | 70.1% |
| 2dixA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 30.0 | 3.65e-01 | 74.6% | 79.5% |
| 3ottB02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 44.0 | 3.27e-01 | 85.6% | 70.6% |
| 7r97A02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 30.0 | 3.83e-01 | 73.7% | 92.6% |
| 1u4cB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 48.0 | 3.49e-01 | 97.5% | 99.1% |
| 3dueA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.54 | 37.0 | 3.69e-01 | 70.3% | 82.7% |
| 1pjxA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.53 | 47.0 | 3.48e-01 | 99.2% | 91.7% |
| 5h1kA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 47.0 | 3.39e-01 | 99.2% | 96.5% |
| 3jb9L00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 42.0 | 3.16e-01 | 85.6% | 61.4% |
| 4aezA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 47.0 | 3.43e-01 | 100.0% | 90.8% |
| 6fcvB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 46.0 | 3.29e-01 | 99.2% | 89.9% |
| 2xepB01 | 3.10.450.280 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 46.0 | 4.70e-01 | 95.8% | 100.0% |
| 5ov3B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 45.0 | 3.38e-01 | 96.6% | 97.7% |
| 3le4A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.52 | 25.0 | 3.49e-01 | 77.1% | 98.2% |
| 3c5mA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 47.0 | 3.26e-01 | 100.0% | 93.6% |
| 4r7rA00 | 3.30.1490.410 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883 | 0.51 | 37.0 | 3.68e-01 | 83.1% | 72.1% |
| 4a2lF02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 46.0 | 3.38e-01 | 100.0% | 98.4% |
| 6vp6A03 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 45.0 | 3.34e-01 | 99.2% | 94.8% |
| 8f5pE01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 42.0 | 2.96e-01 | 89.8% | 64.4% |
| 1ijqA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.50 | 45.0 | 3.53e-01 | 100.0% | 89.8% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3245194 | 5.1.3.152 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Str_synth, SSL_N | 0.58 | 45.0 | 3.15e-01 | 83.1% | 52.4% |
| 3424085 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.58 | 50.0 | 3.57e-01 | 92.4% | 96.5% |
| 3276021 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.57 | 47.0 | 3.09e-01 | 90.7% | 55.2% |
| 4203266 | 5.1.4.100 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Med16_N | 0.57 | 48.0 | 3.14e-01 | 90.7% | 76.4% |
| 3399544 | 5.1.3.25 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Mcl1_mid | 0.56 | 47.0 | 3.49e-01 | 89.8% | 91.7% |
| 3436651 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.56 | 49.0 | 3.48e-01 | 95.8% | 97.2% |
| 4130525 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 46.0 | 3.17e-01 | 91.5% | 42.1% |
| 3498592 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 45.0 | 3.13e-01 | 88.1% | 73.7% |
| 3594793 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 43.0 | 3.14e-01 | 83.1% | 61.6% |
| 3666904 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.55 | 49.0 | 3.58e-01 | 99.2% | 94.5% |
| 3744139 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 48.0 | 3.59e-01 | 99.2% | 99.4% |
| 2219 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 48.0 | 3.48e-01 | 98.3% | 98.5% |
| 3640359 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 47.0 | 3.16e-01 | 95.8% | 92.1% |
| 3699595 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.53 | 48.0 | 3.32e-01 | 99.2% | 79.5% |
| 3429037 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.53 | 46.0 | 3.39e-01 | 95.8% | 92.6% |
| 4022800 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.53 | 46.0 | 3.11e-01 | 96.6% | 86.0% |
| 3375243 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 47.0 | 3.28e-01 | 100.0% | 94.4% |
| 3242109 | 5.1.4.172 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_CAF1B_HIR1 | 0.53 | 46.0 | 2.97e-01 | 99.2% | 56.6% |
| 3338126 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.53 | 41.0 | 3.23e-01 | 83.9% | 56.9% |
| 3743269 | 5.1.4.561 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, CRT10 | 0.52 | 46.0 | 3.20e-01 | 98.3% | 93.5% |
| 3792083 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 46.0 | 3.39e-01 | 100.0% | 62.4% |
| 3263689 | 5.1.4.348 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR75_1st | 0.52 | 43.0 | 3.07e-01 | 89.0% | 46.9% |
| 4561895 | 5.1.3.19 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira | 0.52 | 40.0 | 3.35e-01 | 83.1% | 66.7% |
| 3621260 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.52 | 46.0 | 3.12e-01 | 100.0% | 69.1% |
| 3941202 | 5.1.4.501 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › LLGL, ANAPC4_WD40 | 0.52 | 46.0 | 3.23e-01 | 100.0% | 78.7% |
| 3507301 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 46.0 | 3.47e-01 | 100.0% | 83.1% |
| 4001894 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.51 | 45.0 | 2.76e-01 | 98.3% | 28.0% |
| 5059545 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.51 | 40.0 | 2.91e-01 | 82.2% | 60.6% |
| 3480502 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 45.0 | 2.91e-01 | 100.0% | 52.7% |
| 3935617 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 44.0 | 3.27e-01 | 99.2% | 72.1% |
| 4177814 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.51 | 45.0 | 3.05e-01 | 100.0% | 87.5% |
| 3688468 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 45.0 | 3.37e-01 | 100.0% | 97.1% |
| 3973710 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 45.0 | 3.38e-01 | 100.0% | 95.3% |
| 3391303 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 44.0 | 3.19e-01 | 100.0% | 96.2% |
| 3715158 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.50 | 45.0 | 2.87e-01 | 100.0% | 50.3% |
D2
high
residues 178-324
Domain cluster:
rep: protein_U95__YP_073826__Human_betaherpesvirus_7__10372__D619-769
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02393.22 best | US22 | 65.0 | 9.80e-18 | 80.3% | 92.7% |