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ribonucleoside-diphosphate_reductase_large_subunit
Euk-VirPhaeocystis_globosa_virus
ribonucleoside-diphosphate_reductase_large_subunit__YP_008052446__Phaeocystis_globosa_virus__251749
Identity
- Accession:
- YP_008052446 ↗
- Protein ID:
- ribonucleoside-diphosphate_reductase_large_subunit
- Kingdom:
- euk
Quality
86.1
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Prymnesiovirus›
Phaeocystis_globosa_virus
TaxID: 251749
Cluster
View cluster (122 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 13-97
Domain cluster:
rep: IMGVR_UViG_3300007266_000133-3300007266-Ga0101450_1063124__D4-90
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03477.22 best | ATP-cone | 46.1 | 8.20e-12 | 100.0% | 95.5% |
D2
medium
residues 163-221
Domain cluster:
rep: ribonucleotide_reductase_large_subunit__YP_232955__Vaccinia_virus__10245__D133-214
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00317.27 best | Ribonuc_red_lgN | 77.2 | 1.20e-21 | 100.0% | 80.5% |
D3
medium
residues 222-342_396-449_774-813
Domain cluster:
rep: ribonucleotide_reductase_large_subunit__YP_009702292__African_swine_fever_virus__10497__D187-309_381-436_716-757
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02867.21 best | Ribonuc_red_lgC | 159.5 | 1.80e-46 | 55.4% | 22.3% |
| PF02867.21 | Ribonuc_red_lgC | 66.1 | 3.50e-18 | 26.1% | 10.7% |
| PF02867.21 | Ribonuc_red_lgC | 26.9 | 2.60e-06 | 16.7% | 6.9% |
D4
medium
residues 343-395
Domain cluster:
rep: orf61__YP_009044444__Alcelaphine_gammaherpesvirus_2__138184__D298-350
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02867.21 best | Ribonuc_red_lgC | 38.7 | 7.20e-10 | 100.0% | 10.1% |
D5
medium
residues 450-562_604-684_755-773
Domain cluster:
rep: rr1__YP_009552690__Operophtera_brumata_nucleopolyhedrovirus__1046267__D445-618_684-706
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02867.21 best | Ribonuc_red_lgC | 198.3 | 3.00e-58 | 92.0% | 33.4% |
D6
medium
residues 685-754
Domain cluster:
rep: IMGVR_UViG_3300006567_000026-3300006567-Ga0099958_11086953__D213-268
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02867.21 best | Ribonuc_red_lgC | 58.4 | 7.50e-16 | 100.0% | 13.2% |