←Back to structures

ribonucleotide_reductase_subunit_1

Euk-Vir

Equid_alphaherpesvirus_9

ribonucleotide_reductase_subunit_1__YP_002333502__Equid_alphaherpesvirus_9__55744

Identity

Accession:
YP_002333502 ↗
Protein ID:
ribonucleotide_reductase_subunit_1
Kingdom:
euk

Quality

90.6 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Varicellovirus› Equid_alphaherpesvirus_9

TaxID: 55744

Cluster

View cluster (122 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-89
PDB
Domain cluster: rep: ribonucleotide_reductase_subunit_1__YP_009137191__Human_alphaherpesvirus_2__10310__D371-445
D2 medium residues 90-228
PDB
Domain cluster: rep: ribonucleotide_reductase_subunit_1__NP_077434__Cercopithecine_alphaherpesvirus_9__35246__D89-165
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00317.27 best Ribonuc_red_lgN 56.9 2.60e-15 64.8% 94.8%
D3 medium residues 229-332
PDB
Domain cluster: rep: IMGVR_UViG_3300028089_000252-3300028089-Ga0255299_10029802__D277-388_452-478
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02867.21 best Ribonuc_red_lgC 69.3 3.90e-19 99.0% 19.7%
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1xjkA00 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.85 75.0 4.50e-01 100.0% 15.5%
1r1rA02 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.85 79.0 4.94e-01 100.0% 21.1%
3qfwB02 3.20.20.110 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain 0.75 60.0 4.49e-01 100.0% 35.6%
2oejA02 3.20.20.110 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain 0.72 57.0 4.16e-01 100.0% 30.9%
2i5qA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.70 55.0 4.11e-01 100.0% 35.3%
1vcvA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.70 56.0 4.30e-01 100.0% 38.9%
3gd6A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.68 52.0 4.05e-01 100.0% 37.6%
1ctnA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.67 61.0 4.14e-01 100.0% 54.1%
3lrkA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.66 53.0 3.82e-01 100.0% 31.4%
7vufD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 49.0 3.91e-01 100.0% 39.2%
5tr9A02 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.65 43.0 3.81e-01 94.2% 46.7%
4af8A00 3.40.50.12660 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.65 58.0 4.08e-01 100.0% 52.0%
1tzzA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.65 47.0 3.60e-01 100.0% 31.6%
1g5aA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.64 53.0 3.60e-01 100.0% 24.2%
8b3yA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.64 58.0 4.08e-01 100.0% 33.9%
3qtgA01 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.64 50.0 3.78e-01 100.0% 35.8%
2qq6A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.63 57.0 4.23e-01 100.0% 41.9%
4emyA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.63 57.0 4.35e-01 100.0% 52.1%
3ny7A00 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.62 55.0 5.33e-01 100.0% 85.6%
3o63A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 45.0 3.64e-01 100.0% 38.3%
4ov4A01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 55.0 4.04e-01 100.0% 45.7%
3a21B01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 54.0 3.89e-01 100.0% 34.5%
6sj3B01 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.61 55.0 3.87e-01 100.0% 53.7%
2aamC00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 54.0 3.96e-01 100.0% 46.2%
1m2oA05 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.60 41.0 4.16e-01 70.2% 82.9%
3eleA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.60 55.0 4.21e-01 100.0% 48.3%
1rhcA00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.60 53.0 3.78e-01 100.0% 40.6%
3gy1B02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.60 47.0 3.65e-01 100.0% 37.0%
1ezwA00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.60 54.0 3.74e-01 100.0% 39.5%
3qokA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.60 54.0 3.90e-01 100.0% 35.7%
1sznA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.59 54.0 3.81e-01 100.0% 39.4%
1mumA00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.59 54.0 3.90e-01 100.0% 38.1%
2yv4A00 3.40.50.11030 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Threonylcarbamoyl-AMP synthase, C-terminal domain 0.58 38.0 3.84e-01 77.9% 66.7%
1zkpC00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.57 52.0 3.93e-01 100.0% 43.3%
2c83A02 3.40.50.11110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sialyltransferase, C-terminal GT-B Rossman nucleotide-binding domain 0.57 39.0 3.29e-01 77.9% 40.9%
2bb0A02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.57 50.0 3.66e-01 100.0% 54.7%
4s1hA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.56 50.0 3.68e-01 100.0% 36.6%
8c5iA01 3.60.110.10 Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase 0.56 45.0 3.28e-01 89.4% 92.3%
5fc1A01 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.55 48.0 3.31e-01 100.0% 34.9%
1e6uA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 49.0 3.86e-01 100.0% 63.6%
2q09A02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.55 48.0 3.52e-01 100.0% 44.8%
3dvoA00 3.40.91.10 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.55 48.0 3.42e-01 100.0% 62.9%
4jcqA00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.54 49.0 4.17e-01 100.0% 87.1%
4ofzA02 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.54 45.0 3.55e-01 94.2% 43.5%
3edmD00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 47.0 3.82e-01 100.0% 79.3%
8hi7B01 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.54 48.0 3.55e-01 100.0% 38.5%
4rgyA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 46.0 3.67e-01 100.0% 75.1%
3f4aA00 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.53 40.0 3.66e-01 81.7% 66.0%
7c79I01 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.53 46.0 3.61e-01 100.0% 48.5%
2haeA01 3.40.50.10380 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Malic enzyme, N-terminal domain 0.52 40.0 3.56e-01 81.7% 67.8%
2b99C00 3.40.50.960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase 0.51 47.0 4.10e-01 100.0% 90.8%
3c7aA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 46.0 3.65e-01 100.0% 64.4%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
996122 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.88 83.0 5.01e-01 100.0% 18.6%
4298539 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.88 83.0 5.08e-01 100.0% 20.0%
4067125 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.87 82.0 5.10e-01 100.0% 21.0%
3590466 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.87 82.0 5.04e-01 100.0% 19.6%
3958480 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.87 82.0 5.41e-01 100.0% 28.9%
4963031 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.85 80.0 4.83e-01 100.0% 24.6%
4994375 2500.1.1.0 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.84 79.0 4.90e-01 100.0% 20.6%
5063882 1074.1.1.6 ↗ alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgC 0.84 78.0 5.20e-01 100.0% 28.7%
4993733 2500.1.1.0 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.84 79.0 4.81e-01 100.0% 18.7%
4937370 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.83 77.0 4.65e-01 100.0% 17.0%
4934525 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.83 77.0 4.72e-01 100.0% 18.9%
4990406 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.82 76.0 4.64e-01 100.0% 19.3%
4985374 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.81 75.0 4.55e-01 100.0% 17.9%
4087732 2500.1.1.0 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.74 69.0 4.32e-01 100.0% 22.8%
3275621 2500.1.1.0 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.73 68.0 4.36e-01 100.0% 23.6%
4470996 2002.1.1.28 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PRAI 0.68 50.0 3.91e-01 100.0% 36.0%
4379123 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.65 49.0 3.72e-01 90.4% 33.5%
3585293 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.65 55.0 4.53e-01 100.0% 49.7%
3251783 246.2.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.65 55.0 3.93e-01 100.0% 30.8%
3399646 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.65 49.0 3.38e-01 100.0% 23.0%
3969462 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.64 54.0 4.02e-01 100.0% 35.6%
2629649 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.64 58.0 4.24e-01 100.0% 39.0%
3320588 2006.1.6.9 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Copine 0.63 53.0 4.70e-01 99.0% 63.2%
4110628 2002.1.1.186 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Melibiase_2 0.62 56.0 3.97e-01 100.0% 32.9%
5049925 2007.3.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains 0.62 55.0 4.75e-01 100.0% 82.9%
5031301 246.2.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.62 54.0 4.79e-01 100.0% 66.0%
None — 0.62 56.0 3.96e-01 100.0% 32.9%
3885540 7529.1.1.0 ↗ a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like 0.62 54.0 4.42e-01 97.1% 54.5%
5024574 2002.1.1.44 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TatD_DNase 0.62 56.0 4.08e-01 100.0% 37.5%
3669441 2003.1.5.30 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_7 0.61 53.0 3.63e-01 97.1% 26.7%
3595214 2486.1.1.0 ↗ a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase 0.61 50.0 3.66e-01 93.3% 92.2%
3449154 2003.1.5.30 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_7 0.61 52.0 3.66e-01 97.1% 29.5%
3445610 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 55.0 4.32e-01 100.0% 48.8%
4123060 2002.1.1.64 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_14 0.60 53.0 3.61e-01 100.0% 54.7%
4566118 2002.1.1.64 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_14 0.59 53.0 3.50e-01 100.0% 23.9%
4948180 2004.1.1.196 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.58 52.0 4.11e-01 100.0% 51.8%
3182444 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.58 49.0 3.55e-01 96.2% 31.6%
3368127 2005.1.1.41 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_C 0.57 41.0 3.97e-01 74.0% 73.9%
3284727 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.57 43.0 4.53e-01 90.4% 92.2%
3494146 246.2.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.57 50.0 3.68e-01 100.0% 35.5%
3796599 7563.1.1.0 ↗ a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related 0.56 45.0 3.37e-01 100.0% 32.6%
3254600 2004.1.1.366 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N 0.56 50.0 4.07e-01 100.0% 57.0%
4928167 300.1.1.8 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.56 47.0 3.88e-01 93.3% 80.0%
3327880 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.55 39.0 2.94e-01 77.9% 29.1%
4974059 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.54 48.0 3.39e-01 100.0% 31.4%
5015708 7510.1.1.0 ↗ a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like 0.54 45.0 3.98e-01 91.3% 65.2%
5041491 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.53 40.0 3.54e-01 79.8% 86.5%
5050831 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.53 47.0 4.20e-01 100.0% 68.0%
4594297 246.1.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase 0.53 47.0 3.52e-01 100.0% 38.9%
3279932 2004.1.1.202 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_28 0.53 47.0 3.65e-01 100.0% 63.3%
4022569 300.1.1.8 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.53 44.0 3.49e-01 99.0% 43.9%
3714454 7524.1.1.1 ↗ a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh 0.53 43.0 3.56e-01 93.3% 47.7%
3577691 109.3.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.53 47.0 3.08e-01 100.0% 26.3%
3276368 2004.1.1.598 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF29907 0.52 46.0 3.94e-01 100.0% 76.0%
3695470 7524.1.1.1 ↗ a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh 0.51 46.0 2.97e-01 100.0% 47.6%
3401572 2007.1.2.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.50 46.0 3.77e-01 100.0% 58.9%
3753158 2007.9.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain 0.50 44.0 3.98e-01 100.0% 78.0%
D4 medium residues 333-432
PDB
Domain cluster: rep: ribonucleotide_reductase_subunit_1__YP_010087566__Cervid_alphaherpesvirus_3__2115790__D340-412_739-761
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02867.21 best Ribonuc_red_lgC 71.1 1.00e-19 100.0% 17.0%
D5 medium residues 433-447_467-521
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02867.21 best Ribonuc_red_lgC 28.1 1.10e-06 100.0% 15.3%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1gjsA00 1.10.8.40 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Albumin-binding domain 0.61 40.0 4.13e-01 71.4% 72.3%
1u3dA02 1.25.40.80 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.51 36.0 2.85e-01 72.9% 94.0%
1zchA00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.51 42.0 2.94e-01 95.7% 77.1%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3194882 2003.1.5.151 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 0.50 42.0 2.76e-01 92.9% 37.4%
D6 medium residues 448-466_522-640
PDB
Domain cluster: rep: Rr1__YP_002854736__Euproctis_pseudoconspersa_nucleopolyhedrovirus__307467__D484-597
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02867.21 best Ribonuc_red_lgC 114.8 6.10e-33 88.4% 22.5%
D7 medium residues 641-710
PDB
Domain cluster: rep: ribonucleotide_reductase_subunit_1__YP_182368__Gallid_alphaherpesvirus_1__10386__D639-699
D8 medium residues 711-773
PDB
Domain cluster: rep: Ribonucleotide_reductase_large_subunit_protein__YP_009143381__Raccoonpox_virus__10256__D684-741
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02867.21 best Ribonuc_red_lgC 59.4 3.70e-16 88.9% 9.9%