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rifampicin_resistance_N3L_protein
Euk-VirPigeonpox_virus
rifampicin_resistance_N3L_protein__YP_009046287__Pigeonpox_virus__10264
Identity
- Accession:
- YP_009046287 ↗
- Protein ID:
- rifampicin_resistance_N3L_protein
- Kingdom:
- euk
Quality
86.7
mean pLDDT
Cluster
View cluster (35 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 50-92_118-172_188-224
Domain cluster:
rep: major_capsid_protein__YP_009508644__Common_midwife_toad_virus__540070__D48-85_114-155_177-212_243-266
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03340.20 best | Pox_Rif | 98.8 | 3.80e-28 | 68.9% | 19.9% |
| PF03340.20 | Pox_Rif | 56.6 | 2.40e-15 | 37.8% | 9.0% |
D2
medium
residues 93-117_173-187
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03340.20 best | Pox_Rif | 27.5 | 1.50e-06 | 67.5% | 4.8% |
CATH (78)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5tipA01 | 2.70.9.10 | Mainly Beta › Distorted Sandwich › Adenovirus Type 2 Hexon; domain 4 › Adenovirus Type 2 Hexon, domain 4 | 0.84 | 73.0 | 4.66e-01 | 100.0% | 49.5% |
| 2vvfA01 | 2.60.120.730 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 64.0 | 4.48e-01 | 100.0% | 58.9% |
| 1v8hA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.76 | 65.0 | 4.81e-01 | 100.0% | 62.3% |
| 7jooC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.75 | 64.0 | 4.89e-01 | 100.0% | 71.1% |
| 6iymA02 | 3.90.850.10 | Alpha Beta › Alpha-Beta Complex › Fumarylacetoacetate hydrolase; domain 2 › Fumarylacetoacetase-like, C-terminal domain | 0.75 | 63.0 | 4.00e-01 | 97.5% | 58.2% |
| 2zxqA04 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.75 | 63.0 | 4.25e-01 | 97.5% | 51.6% |
| 2nncA00 | 2.60.40.2470 | Mainly Beta › Sandwich › Immunoglobulin-like › SoxY domain | 0.74 | 63.0 | 4.59e-01 | 97.5% | 45.5% |
| 5aa7A00 | 2.70.50.50 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › chitin-binding protein cbp21 | 0.74 | 63.0 | 4.28e-01 | 97.5% | 35.9% |
| 1kshB00 | 2.70.50.40 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › GMP phosphodiesterase, delta subunit | 0.73 | 63.0 | 4.34e-01 | 100.0% | 38.7% |
| 3d3aA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.71 | 57.0 | 4.06e-01 | 95.0% | 33.6% |
| 3nvqA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.70 | 59.0 | 4.71e-01 | 97.5% | 58.3% |
| 6se8A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.70 | 59.0 | 4.39e-01 | 97.5% | 64.8% |
| 1yq2A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.70 | 59.0 | 4.30e-01 | 97.5% | 59.1% |
| 1vcaA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.70 | 58.0 | 4.31e-01 | 97.5% | 53.6% |
| 1ollA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 57.0 | 4.41e-01 | 97.5% | 53.7% |
| 2vngA00 | 2.60.120.1060 | Mainly Beta › Sandwich › Jelly Rolls › NPCBM/NEW2 domain | 0.69 | 58.0 | 3.85e-01 | 97.5% | 38.0% |
| 2je8A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 58.0 | 4.29e-01 | 97.5% | 64.5% |
| 2wngA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 58.0 | 4.56e-01 | 97.5% | 59.8% |
| 3wnoA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 57.0 | 4.33e-01 | 97.5% | 62.0% |
| 4r9pA00 | 2.60.200.10 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.69 | 56.0 | 3.57e-01 | 95.0% | 81.9% |
| 7wguB01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.69 | 57.0 | 4.43e-01 | 95.0% | 52.7% |
| 1pk6C00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 55.0 | 3.99e-01 | 97.5% | 42.6% |
| 1zxqA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 56.0 | 4.26e-01 | 100.0% | 55.1% |
| 4d7yA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 56.0 | 4.01e-01 | 97.5% | 45.8% |
| 1tg7A04 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.68 | 54.0 | 3.65e-01 | 97.5% | 30.0% |
| 2pn5A05 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.68 | 57.0 | 4.35e-01 | 97.5% | 56.2% |
| 6grqA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 52.0 | 4.15e-01 | 90.0% | 55.7% |
| 1aw7A01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.67 | 55.0 | 4.04e-01 | 100.0% | 43.1% |
| 3ld7A00 | 2.60.320.10 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › N-utilization substance G protein NusG, insert domain | 0.67 | 52.0 | 4.24e-01 | 92.5% | 100.0% |
| 3kq4B04 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.67 | 56.0 | 4.17e-01 | 100.0% | 68.5% |
| 2gy5A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 55.0 | 4.29e-01 | 95.0% | 53.3% |
| 5dykA03 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.67 | 50.0 | 3.65e-01 | 87.5% | 55.6% |
| 2wq4A01 | 2.60.120.760 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 55.0 | 3.95e-01 | 97.5% | 55.0% |
| 1edqA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 52.0 | 3.86e-01 | 87.5% | 42.1% |
| 4f3jA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 53.0 | 3.76e-01 | 97.5% | 41.3% |
| 3gm8A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 52.0 | 4.35e-01 | 95.0% | 55.1% |
| 4p02B03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.66 | 55.0 | 3.83e-01 | 100.0% | 41.3% |
| 4jklA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.65 | 53.0 | 3.50e-01 | 95.0% | 26.8% |
| 3tp4B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 55.0 | 4.23e-01 | 97.5% | 57.0% |
| 3pdgA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 54.0 | 4.20e-01 | 97.5% | 50.5% |
| 2l0dA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 52.0 | 3.90e-01 | 97.5% | 54.4% |
| 2fcbA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 52.0 | 4.22e-01 | 97.5% | 51.7% |
| 3cu7A05 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.64 | 54.0 | 4.08e-01 | 100.0% | 49.1% |
| 2a74A05 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.64 | 54.0 | 4.06e-01 | 100.0% | 49.5% |
| 4wtxA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 52.0 | 4.04e-01 | 97.5% | 59.8% |
| 1gnyA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.64 | 52.0 | 3.64e-01 | 100.0% | 45.8% |
| 3kt4A02 | 3.60.130.20 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Oxoglutarate/iron-dependent oxygenase, C-terminal degradation domain | 0.64 | 55.0 | 3.28e-01 | 100.0% | 65.8% |
| 4ht1T00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 52.0 | 3.79e-01 | 97.5% | 44.3% |
| 3ks7A02 | 2.60.120.230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 52.0 | 3.51e-01 | 100.0% | 62.6% |
| 2y7qA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 52.0 | 4.16e-01 | 97.5% | 50.6% |
| 3pddA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 52.0 | 4.01e-01 | 97.5% | 46.5% |
| 3w5nA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 51.0 | 3.48e-01 | 97.5% | 47.3% |
| 1pgsA02 | 2.60.120.230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 51.0 | 3.48e-01 | 100.0% | 53.7% |
| 3arxA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 48.0 | 3.63e-01 | 90.0% | 40.5% |
| 1d2oA01 | 2.60.40.1140 | Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain | 0.62 | 50.0 | 3.81e-01 | 97.5% | 57.9% |
| 2xfdA00 | 2.60.60.40 | Mainly Beta › Sandwich › Lipoxygenase-1 › | 0.62 | 50.0 | 3.78e-01 | 97.5% | 46.8% |
| 2vsdA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 49.0 | 3.91e-01 | 97.5% | 53.8% |
| 2q3xA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.61 | 50.0 | 3.54e-01 | 100.0% | 45.1% |
| 5jipA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 48.0 | 3.90e-01 | 97.5% | 56.7% |
| 4eskC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 46.0 | 3.63e-01 | 90.0% | 50.0% |
| 3thdA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 46.0 | 3.38e-01 | 95.0% | 32.8% |
| 4gb7A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.60 | 50.0 | 2.90e-01 | 97.5% | 74.7% |
| 7t7zA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.60 | 49.0 | 3.46e-01 | 100.0% | 48.0% |
| 3ocpB00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 42.0 | 3.11e-01 | 82.5% | 48.4% |
| 2w1nA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 46.0 | 3.88e-01 | 97.5% | 56.1% |
| 5tgfD00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.59 | 48.0 | 2.86e-01 | 100.0% | 86.1% |
| 2waoA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 47.0 | 3.62e-01 | 97.5% | 46.8% |
| 2w3jA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 46.0 | 3.40e-01 | 100.0% | 41.6% |
| 4qawH03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 46.0 | 3.35e-01 | 100.0% | 41.0% |
| 7pjjA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 47.0 | 3.43e-01 | 100.0% | 43.4% |
| 5uj6A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 43.0 | 3.13e-01 | 95.0% | 42.1% |
| 2h41A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 44.0 | 3.58e-01 | 97.5% | 54.7% |
| 2cspA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 46.0 | 3.65e-01 | 97.5% | 58.2% |
| 3fn9A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 43.0 | 3.06e-01 | 95.0% | 29.6% |
| 1vl4A01 | 3.30.2290.10 | Alpha Beta › 2-Layer Sandwich › PmbA/TldD fold › PmbA/TldD superfamily | 0.57 | 48.0 | 3.09e-01 | 100.0% | 58.0% |
| 8a28A02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 42.0 | 3.18e-01 | 100.0% | 67.6% |
| 1ne6A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 42.0 | 3.10e-01 | 100.0% | 78.7% |
| 5e16A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 40.0 | 2.92e-01 | 100.0% | 71.7% |
ECOD (91)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4883559 | 10.2.1.33 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Pox_Rif | 0.97 | 90.0 | 5.49e-01 | 100.0% | 45.7% |
| 2995054 | 10.2.1.54 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_N | 0.85 | 75.0 | 4.63e-01 | 100.0% | 42.9% |
| 4830370 | 10.2.1.54 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_N | 0.84 | 72.0 | 4.42e-01 | 100.0% | 42.6% |
| 3401944 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.82 | 71.0 | 5.17e-01 | 97.5% | 65.7% |
| 3882371 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.76 | 66.0 | 5.11e-01 | 100.0% | 55.6% |
| 5020007 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.76 | 65.0 | 4.76e-01 | 97.5% | 66.7% |
| 5032885 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.76 | 64.0 | 5.10e-01 | 100.0% | 62.4% |
| 4958132 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.76 | 65.0 | 4.58e-01 | 100.0% | 45.4% |
| 4945423 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.75 | 67.0 | 4.83e-01 | 100.0% | 75.2% |
| 5001430 | 11.1.1.246 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_7 | 0.75 | 64.0 | 4.85e-01 | 97.5% | 55.8% |
| 5051542 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.74 | 66.0 | 4.16e-01 | 100.0% | 37.4% |
| 5046964 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.74 | 62.0 | 4.78e-01 | 97.5% | 56.8% |
| 1716900 | 11.1.1.49 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LPMO_10 | 0.74 | 63.0 | 4.28e-01 | 97.5% | 35.9% |
| 3231211 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.74 | 65.0 | 4.56e-01 | 100.0% | 64.0% |
| 3595740 | 223.2.1.32 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_2 | 0.73 | 65.0 | 4.11e-01 | 100.0% | 65.0% |
| 3481359 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.73 | 61.0 | 4.65e-01 | 97.5% | 47.0% |
| 3579099 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.73 | 61.0 | 4.09e-01 | 100.0% | 58.9% |
| 3517819 | 11.1.1.203 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LacZ_4 | 0.73 | 62.0 | 4.65e-01 | 97.5% | 63.0% |
| 4926836 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.73 | 65.0 | 4.50e-01 | 100.0% | 70.4% |
| 4951436 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.72 | 60.0 | 4.07e-01 | 97.5% | 36.8% |
| 5002135 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.72 | 59.0 | 4.59e-01 | 97.5% | 65.3% |
| 4942377 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.72 | 62.0 | 4.48e-01 | 97.5% | 56.4% |
| 5059204 | 11.1.1.246 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_7 | 0.72 | 61.0 | 4.67e-01 | 97.5% | 54.7% |
| 5045352 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.71 | 61.0 | 4.56e-01 | 100.0% | 54.3% |
| 3993856 | 223.2.1.32 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_2 | 0.71 | 64.0 | 4.28e-01 | 100.0% | 60.0% |
| 2141858 | 11.1.1.203 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LacZ_4 | 0.70 | 60.0 | 4.40e-01 | 97.5% | 63.6% |
| 3525470 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 60.0 | 4.22e-01 | 100.0% | 42.2% |
| 5026980 | 11.1.1.246 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_7 | 0.70 | 59.0 | 4.54e-01 | 97.5% | 48.4% |
| 4529669 | 223.2.1.32 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_2 | 0.70 | 62.0 | 4.19e-01 | 100.0% | 60.0% |
| 4943630 | 11.1.1.1398 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Bgal_small_N | 0.70 | 58.0 | 4.37e-01 | 97.5% | 61.9% |
| 3517316 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.70 | 55.0 | 4.21e-01 | 97.5% | 76.4% |
| 3780293 | 11.1.3.4 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like › CHRD | 0.69 | 57.0 | 4.10e-01 | 92.5% | 46.7% |
| 1753 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 57.0 | 4.41e-01 | 97.5% | 53.7% |
| 4956335 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 55.0 | 4.39e-01 | 92.5% | 55.3% |
| 4945547 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 58.0 | 3.99e-01 | 100.0% | 38.0% |
| 5016526 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.69 | 57.0 | 3.66e-01 | 97.5% | 24.9% |
| 5069351 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.68 | 56.0 | 4.34e-01 | 95.0% | 60.0% |
| 5067977 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.68 | 56.0 | 4.19e-01 | 97.5% | 55.5% |
| 5060998 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.68 | 58.0 | 4.31e-01 | 97.5% | 56.2% |
| 4448377 | 11.1.1.203 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LacZ_4 | 0.68 | 56.0 | 4.28e-01 | 97.5% | 65.0% |
| 5067153 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 56.0 | 3.97e-01 | 97.5% | 46.5% |
| 5070565 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.68 | 57.0 | 3.37e-01 | 97.5% | 18.5% |
| 3908506 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.68 | 54.0 | 3.87e-01 | 97.5% | 42.1% |
| 3897045 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.68 | 55.0 | 4.21e-01 | 97.5% | 51.4% |
| 5060696 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 57.0 | 4.18e-01 | 100.0% | 51.3% |
| 3183427 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.67 | 56.0 | 3.93e-01 | 100.0% | 43.4% |
| 5080451 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 57.0 | 4.36e-01 | 97.5% | 60.0% |
| 3817063 | 11.1.1.51 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 | 0.67 | 56.0 | 3.78e-01 | 97.5% | 53.8% |
| 4963687 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 55.0 | 4.34e-01 | 97.5% | 62.2% |
| 3879619 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.66 | 54.0 | 3.80e-01 | 100.0% | 38.0% |
| 5080265 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.66 | 55.0 | 3.99e-01 | 97.5% | 52.5% |
| 3902170 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.66 | 53.0 | 3.88e-01 | 97.5% | 43.2% |
| 3726357 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 52.0 | 4.02e-01 | 90.0% | 57.9% |
| 5070570 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.66 | 55.0 | 4.11e-01 | 97.5% | 58.1% |
| 5070568 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.66 | 57.0 | 4.23e-01 | 100.0% | 53.3% |
| 3274281 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.66 | 58.0 | 4.06e-01 | 100.0% | 36.9% |
| 4992535 | 11.1.1.163 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › BsuPI | 0.66 | 51.0 | 3.86e-01 | 92.5% | 54.5% |
| 3896825 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.66 | 53.0 | 3.77e-01 | 97.5% | 44.9% |
| 3875306 | 10.32.1.216 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM | 0.66 | 55.0 | 3.19e-01 | 100.0% | 27.0% |
| 5068612 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.66 | 54.0 | 4.16e-01 | 97.5% | 61.0% |
| 5018967 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.65 | 56.0 | 4.20e-01 | 100.0% | 53.3% |
| 3647964 | 11.1.1.203 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LacZ_4 | 0.65 | 57.0 | 4.23e-01 | 100.0% | 58.1% |
| 5060216 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.65 | 54.0 | 4.12e-01 | 100.0% | 84.8% |
| 4015603 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.65 | 55.0 | 3.97e-01 | 97.5% | 52.2% |
| 3749224 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.65 | 54.0 | 3.62e-01 | 100.0% | 36.5% |
| 3590615 | 4019.1.1.1 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.65 | 56.0 | 3.29e-01 | 100.0% | 91.6% |
| 3785321 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.64 | 52.0 | 4.05e-01 | 100.0% | 76.0% |
| 3567185 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.64 | 47.0 | 3.73e-01 | 85.0% | 49.5% |
| 5067901 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.64 | 53.0 | 4.00e-01 | 97.5% | 57.1% |
| 5070530 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.64 | 52.0 | 3.98e-01 | 97.5% | 58.1% |
| 5005852 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.64 | 52.0 | 3.62e-01 | 97.5% | 41.3% |
| 5070571 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.64 | 52.0 | 3.95e-01 | 97.5% | 58.1% |
| 4968872 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.63 | 51.0 | 3.98e-01 | 97.5% | 59.0% |
| 3685508 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.63 | 49.0 | 3.53e-01 | 85.0% | 37.6% |
| 3620218 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.63 | 53.0 | 4.13e-01 | 97.5% | 84.3% |
| 5068103 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.63 | 51.0 | 3.90e-01 | 95.0% | 60.0% |
| 3337032 | 10.32.1.38 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like | 0.63 | 51.0 | 3.43e-01 | 100.0% | 30.6% |
| 4993515 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.62 | 50.0 | 3.42e-01 | 100.0% | 55.3% |
| 3477802 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.62 | 52.0 | 3.81e-01 | 100.0% | 75.0% |
| 3824666 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 49.0 | 3.49e-01 | 97.5% | 55.9% |
| 3198292 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.62 | 50.0 | 3.92e-01 | 100.0% | 48.0% |
| 4373864 | 10.32.1.73 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_ABD_1 | 0.62 | 49.0 | 3.48e-01 | 97.5% | 31.3% |
| 3291064 | 4019.1.1.1 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.62 | 51.0 | 3.02e-01 | 100.0% | 91.1% |
| 5019537 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.61 | 49.0 | 3.74e-01 | 97.5% | 59.0% |
| 5040282 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.61 | 47.0 | 3.58e-01 | 90.0% | 53.3% |
| 5005860 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.61 | 48.0 | 3.39e-01 | 97.5% | 41.3% |
| 3966831 | 4019.1.1.1 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.60 | 50.0 | 2.96e-01 | 100.0% | 84.4% |
| 3822365 | 206.1.1.105 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Malectin_like | 0.59 | 45.0 | 3.25e-01 | 97.5% | 67.7% |
| 3967838 | 223.3.1.1 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.58 | 47.0 | 3.04e-01 | 100.0% | 84.5% |
| 3566216 | 11.2.1.22 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › CC2D2AN-C2 | 0.57 | 45.0 | 3.22e-01 | 97.5% | 46.9% |
| 3779466 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.55 | 44.0 | 2.58e-01 | 97.5% | 13.9% |
D3
medium
residues 225-271_416-552
Domain cluster:
rep: putative_capsid_protein_4__YP_003969808__Cafeteria_roenbergensis_virus_BV-PW1__693272__D326-494
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03340.20 best | Pox_Rif | 217.0 | 5.90e-64 | 75.0% | 25.3% |
| PF03340.20 | Pox_Rif | 43.5 | 2.30e-11 | 25.5% | 8.1% |
D4
medium
residues 272-307_361-384
Domain cluster:
rep: hypothetical_protein_VARVgp103__NP_042147__Variola_virus__10255__D271-300_359-381
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03340.20 best | Pox_Rif | 53.3 | 2.30e-14 | 61.7% | 6.6% |
| PF03340.20 | Pox_Rif | 28.7 | 6.90e-07 | 45.0% | 4.4% |
D5
medium
residues 308-360_385-415
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03340.20 best | Pox_Rif | 80.9 | 9.90e-23 | 66.7% | 10.0% |
| PF03340.20 | Pox_Rif | 43.2 | 2.60e-11 | 38.1% | 5.7% |
ECOD (1)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 185528 | 3298.1.1.1 ↗ | a+b complex topology › Insertion domain in vaccinia virus scaffolding protein D13 › Insertion domain in vaccinia virus scaffolding protein D13 › Insertion domain in vaccinia virus scaffolding protein D13 › Pox_Rif | 0.96 | 93.0 | 7.33e-01 | 100.0% | 72.0% |