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rifampicin_target
Euk-VirVaccinia_virus
rifampicin_target__YP_233000__Vaccinia_virus__10245
Identity
- Accession:
- YP_233000 ↗
- Protein ID:
- rifampicin_target
- Kingdom:
- euk
Quality
83.0
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Orthopoxvirus›
Orthopoxvirus_vaccinia
TaxID: 10245
Cluster
View cluster (35 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 32-225
Domain cluster:
rep: major_capsid_protein__YP_009508644__Common_midwife_toad_virus__540070__D48-85_114-155_177-212_243-266
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03340.20 best | Pox_Rif | 322.0 | 8.90e-96 | 100.0% | 35.6% |
D2
high
residues 270-423
Domain cluster:
rep: rifampicin_resistance_protein__YP_009001666__Anomala_cuprea_entomopoxvirus__62099__D266-416
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03340.20 best | Pox_Rif | 285.0 | 1.40e-84 | 100.0% | 28.4% |
D3
medium
residues 226-267_427-551
Domain cluster:
rep: putative_capsid_protein_4__YP_003969808__Cafeteria_roenbergensis_virus_BV-PW1__693272__D326-494
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03340.20 best | Pox_Rif | 201.5 | 3.00e-59 | 74.2% | 22.7% |
| PF03340.20 | Pox_Rif | 49.4 | 3.60e-13 | 25.8% | 7.8% |