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rifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00065
Bact-Virrifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00065
Identity
- Kingdom:
- phage
Quality
79.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-125
Domain cluster:
rep: SR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00081__D115-211
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ztdF01 | 2.60.40.780 | Mainly Beta › Sandwich › Immunoglobulin-like › von Hippel-Lindau disease tumour suppressor, beta domain | 0.55 | 40.0 | 4.12e-01 | 77.2% | 100.0% |
| 5zliA01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.54 | 42.0 | 4.04e-01 | 83.7% | 96.2% |
| 2y3aA01 | 3.10.20.770 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.53 | 45.0 | 3.24e-01 | 94.6% | 40.7% |
| 4bfrB02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 45.0 | 4.05e-01 | 94.6% | 85.2% |
| 3ng0A01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.52 | 40.0 | 3.87e-01 | 83.7% | 96.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3594745 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 43.0 | 4.13e-01 | 78.3% | 83.6% |
| 4047331 | 221.10.1.1 ↗ | a+b two layers › beta-Grasp › FdhD/NarQ beta-grasp fold domain › FdhD/NarQ beta-grasp fold domain › FdhD-NarQ | 0.57 | 40.0 | 3.94e-01 | 73.9% | 87.0% |
| 3246059 | 221.1.1.8 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd | 0.56 | 49.0 | 4.14e-01 | 100.0% | 70.9% |
| 4343568 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.56 | 40.0 | 4.53e-01 | 76.1% | 98.6% |
| 4681806 | 221.1.1.88 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › CLU_N | 0.56 | 41.0 | 3.89e-01 | 79.3% | 78.3% |
| 3407412 | 221.1.1.19 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DCX | 0.55 | 40.0 | 3.80e-01 | 76.1% | 79.1% |
| 3626414 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 36.0 | 3.94e-01 | 88.0% | 88.0% |
| 4011669 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.52 | 40.0 | 3.38e-01 | 85.9% | 93.3% |
| 5049242 | 221.1.1.1 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Fer2 | 0.51 | 38.0 | 3.58e-01 | 81.5% | 100.0% |
| 2639188 | 211.1.1.7 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase_4 | 0.51 | 30.0 | 3.29e-01 | 97.8% | 74.6% |
| 3890848 | 221.1.1.9 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd,PIK3CG_ABD | 0.51 | 42.0 | 3.08e-01 | 95.7% | 39.0% |
| 3290990 | 2484.1.1.8 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK | 0.50 | 41.0 | 2.84e-01 | 91.3% | 89.7% |