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rifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00079
Bact-Virrifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00079
Identity
- Kingdom:
- phage
Quality
87.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-90
Domain cluster:
representative
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4929289 | 375.1.1.329 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TackOD1 | 0.61 | 38.0 | 4.37e-01 | 74.2% | 87.7% |
| 3344796 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.54 | 40.0 | 4.11e-01 | 92.1% | 85.5% |
| 3259141 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.51 | 30.0 | 3.48e-01 | 86.5% | 86.7% |
D2
high
residues 95-172
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dq3A03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.65 | 38.0 | 3.75e-01 | 91.0% | 52.9% |
| 6ff4Y00 | 1.20.1390.10 | Mainly Alpha › Up-down Bundle › PWI domain › PWI domain | 0.56 | 42.0 | 3.97e-01 | 100.0% | 66.3% |
| 4gx0A01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 37.0 | 3.48e-01 | 100.0% | 54.4% |
| 7xpcA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 43.0 | 2.96e-01 | 97.4% | 99.1% |
| 6cw0A00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.52 | 44.0 | 4.10e-01 | 98.7% | 97.1% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3789516 | 592.1.1.1 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain › PWI | 0.56 | 46.0 | 4.63e-01 | 100.0% | 89.9% |
| 4078112 | 592.1.1.1 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain › PWI | 0.55 | 45.0 | 4.52e-01 | 100.0% | 89.9% |
| 3587710 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.52 | 41.0 | 4.16e-01 | 100.0% | 85.0% |
| 4390114 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.52 | 41.0 | 4.20e-01 | 100.0% | 89.3% |