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rifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00088
Bact-Virrifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00088
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-77
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2e70A00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.84 | 58.0 | 6.08e-01 | 74.0% | 77.5% |
| 5zwzA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.82 | 56.0 | 5.87e-01 | 70.1% | 92.9% |
| 3mp6A05 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 55.0 | 6.00e-01 | 72.7% | 85.7% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 63.0 | 6.75e-01 | 94.8% | 97.0% |
| 3pieC05 | 2.170.260.40 | Mainly Beta › Beta Complex › paz domain › | 0.78 | 55.0 | 4.24e-01 | 74.0% | 72.5% |
| 1khcA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 57.0 | 6.13e-01 | 75.3% | 98.5% |
| 2mamA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 56.0 | 4.78e-01 | 75.3% | 89.8% |
| 1n27A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 52.0 | 4.86e-01 | 70.1% | 62.5% |
| 3pieB05 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 53.0 | 5.74e-01 | 71.4% | 100.0% |
| 2l89A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 55.0 | 4.81e-01 | 74.0% | 62.0% |
| 1x6gA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.75 | 53.0 | 5.28e-01 | 74.0% | 82.7% |
| 4f7uG00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 51.0 | 5.34e-01 | 70.1% | 98.5% |
| 3jb9F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 53.0 | 5.28e-01 | 77.9% | 86.6% |
| 4p5nA00 | 2.30.30.1060 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 51.0 | 5.28e-01 | 74.0% | 95.9% |
| 4a53A01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 48.0 | 5.30e-01 | 70.1% | 90.3% |
| 1ljoA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 50.0 | 5.10e-01 | 74.0% | 94.7% |
| 1b34B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 48.0 | 4.96e-01 | 72.7% | 91.9% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 51.0 | 5.39e-01 | 80.5% | 98.5% |
| 1kjzA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.64 | 42.0 | 3.97e-01 | 70.1% | 55.4% |
| 2qeaB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 45.0 | 3.63e-01 | 75.3% | 76.9% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 48.0 | 4.37e-01 | 81.8% | 79.4% |
| 3db0B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 43.0 | 3.75e-01 | 74.0% | 95.2% |
| 3na2A00 | 3.40.1570.20 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › | 0.60 | 45.0 | 3.79e-01 | 81.8% | 70.3% |
| 2htiA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 43.0 | 3.67e-01 | 75.3% | 93.7% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 42.0 | 3.61e-01 | 74.0% | 71.0% |
| 2ig6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 47.0 | 3.88e-01 | 85.7% | 51.0% |
| 1dkiC01 | 3.90.70.50 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) | 0.60 | 43.0 | 3.25e-01 | 76.6% | 47.4% |
| 4eq8A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.60 | 41.0 | 3.32e-01 | 72.7% | 48.1% |
| 4ybnB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 42.0 | 3.09e-01 | 75.3% | 69.3% |
| 2hqvA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.59 | 43.0 | 3.39e-01 | 79.2% | 55.8% |
| 2hq9B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 39.0 | 3.31e-01 | 71.4% | 91.2% |
| 3qeeB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.57 | 44.0 | 2.95e-01 | 83.1% | 33.1% |
| 2furB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 39.0 | 3.01e-01 | 74.0% | 73.7% |
| 3u5wA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 38.0 | 3.33e-01 | 71.4% | 91.3% |
| 2jisA01 | 3.90.1150.170 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.56 | 49.0 | 3.47e-01 | 98.7% | 51.0% |
| 2rrfA00 | 2.30.29.160 | Mainly Beta › Roll › PH-domain like › Zinc finger FYVE domain-containing protein 21, C-terminal | 0.54 | 43.0 | 3.62e-01 | 89.6% | 73.0% |
| 1maiA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 39.0 | 3.43e-01 | 77.9% | 83.2% |
| 2m89A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 36.0 | 3.01e-01 | 72.7% | 82.8% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 36.0 | 3.72e-01 | 76.6% | 85.9% |
| 3apuB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 37.0 | 2.90e-01 | 77.9% | 89.0% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3577505 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.86 | 58.0 | 5.58e-01 | 72.7% | 62.4% |
| 3304602 | 4.1.1.427 ↗ | beta barrels › SH3 › SH3 › SH3 › F-box | 0.85 | 56.0 | 5.16e-01 | 72.7% | 54.7% |
| 3612184 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.84 | 59.0 | 6.63e-01 | 81.8% | 93.3% |
| 3707347 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.84 | 57.0 | 6.64e-01 | 72.7% | 98.2% |
| 3835464 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 56.0 | 5.87e-01 | 72.7% | 75.7% |
| 3935130 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 57.0 | 6.65e-01 | 71.4% | 98.2% |
| 4110119 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.83 | 58.0 | 5.02e-01 | 72.7% | 50.0% |
| 3463181 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 55.0 | 5.78e-01 | 72.7% | 75.7% |
| 3429682 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 55.0 | 5.60e-01 | 72.7% | 70.7% |
| 3815479 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 55.0 | 5.59e-01 | 72.7% | 70.7% |
| 3684646 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 58.0 | 5.71e-01 | 72.7% | 70.0% |
| 3658643 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.81 | 57.0 | 4.50e-01 | 72.7% | 39.3% |
| 3482225 | 4.1.1.300 ↗ | beta barrels › SH3 › SH3 › SH3 › KN17_SH3, SH3_KIN17_C | 0.80 | 57.0 | 4.69e-01 | 74.0% | 45.4% |
| 3936926 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 57.0 | 6.18e-01 | 75.3% | 90.8% |
| 3669492 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.78 | 60.0 | 4.81e-01 | 80.5% | 49.3% |
| 3558774 | 4.1.1.104 ↗ | beta barrels › SH3 › SH3 › SH3 › KN17_SH3 | 0.77 | 57.0 | 6.34e-01 | 77.9% | 98.3% |
| 3277206 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 53.0 | 5.34e-01 | 72.7% | 79.5% |
| 3469279 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 51.0 | 5.25e-01 | 72.7% | 72.0% |
| 3480351 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 55.0 | 5.60e-01 | 76.6% | 94.7% |
| 3700174 | 4.18.1.0 ↗ | beta barrels › SH3 › Plus3 › Plus3 | 0.75 | 55.0 | 4.61e-01 | 77.9% | 47.2% |
| 3925069 | 4.1.1.319 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Hsr9 | 0.74 | 60.0 | 4.84e-01 | 85.7% | 93.6% |
| 3211839 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.72 | 56.0 | 5.87e-01 | 83.1% | 100.0% |
| 3712122 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.71 | 54.0 | 5.31e-01 | 83.1% | 89.4% |
| 3247188 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.71 | 51.0 | 5.22e-01 | 75.3% | 90.7% |
| 3308604 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.70 | 52.0 | 5.28e-01 | 77.9% | 86.7% |
| 2561577 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.69 | 52.0 | 5.69e-01 | 80.5% | 100.0% |
| 3598462 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 40.0 | 3.57e-01 | 81.8% | 84.0% |