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rifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00120
Bact-Virrifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00120
Identity
- Kingdom:
- phage
Quality
68.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 38-98
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hf1A01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.65 | 52.0 | 5.46e-01 | 88.5% | 96.4% |
| 1ji8A01 | 3.30.1420.10 | Alpha Beta › 2-Layer Sandwich › Dissimilatory Siroheme-sulfite Reductase; Chain: A; domain 1 › DsrC protein, N-terminal domain | 0.53 | 34.0 | 3.66e-01 | 86.9% | 85.1% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3663342 | 4294.1.1.2 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Trm112p | 0.70 | 48.0 | 5.34e-01 | 72.1% | 92.0% |
| 4506302 | 4294.1.1.2 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Trm112p | 0.69 | 47.0 | 5.35e-01 | 70.5% | 97.8% |
| 4280908 | 4294.1.1.2 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Trm112p | 0.69 | 47.0 | 5.35e-01 | 70.5% | 97.8% |
| 4572115 | 4294.1.1.2 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Trm112p | 0.69 | 46.0 | 4.90e-01 | 70.5% | 80.0% |
| 4056467 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 42.0 | 4.33e-01 | 98.4% | 78.3% |
| 3882796 | 1021.1.1.2 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › RNA_hel_CTD | 0.56 | 32.0 | 2.88e-01 | 82.0% | 37.6% |
| 3794686 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.54 | 37.0 | 3.63e-01 | 73.8% | 70.0% |
| 4034196 | 2484.2.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain › Methyltransf_1N | 0.51 | 37.0 | 3.57e-01 | 90.2% | 68.6% |