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rifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00246

Bact-Vir

rifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00246

Identity

Kingdom:
phage

Quality

81.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 25-127
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6j5cA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.64 39.0 4.27e-01 88.3% 74.7%
3djmA00 2.170.150.40 Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Domain of unknown function (DUF427) 0.61 33.0 3.30e-01 78.6% 47.3%
2dyiA02 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.56 36.0 4.16e-01 95.1% 94.4%
4d6wA03 2.30.29.130 Mainly Beta › Roll › PH-domain like › 0.55 38.0 3.98e-01 89.3% 77.9%
2wiiC02 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.54 30.0 3.62e-01 93.2% 86.9%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4016434 7525.1.1.2 ↗ a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 0.54 43.0 2.94e-01 86.4% 95.0%
3562067 389.1.2.1 ↗ few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.52 30.0 3.55e-01 93.2% 87.7%
3869154 101.1.2.565 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_PARP12 0.52 28.0 3.17e-01 81.6% 68.8%
3268336 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.51 34.0 2.86e-01 74.8% 36.9%