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rifcsphigho2_12_scaffold_16_prodigal-single.1__X__X__00182
Bact-Virrifcsphigho2_12_scaffold_16_prodigal-single.1__X__X__00182
Identity
- Kingdom:
- phage
Quality
90.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-105
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF27352.1 best | AF_0059 | 61.7 | 8.10e-17 | 99.0% | 80.3% |
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hu1A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.76 | 61.0 | 6.26e-01 | 100.0% | 89.6% |
| 4ga6A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.76 | 59.0 | 6.47e-01 | 93.1% | 100.0% |
| 1wlfA01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.76 | 59.0 | 6.45e-01 | 96.1% | 100.0% |
| 3ougA00 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.71 | 56.0 | 5.60e-01 | 97.1% | 81.1% |
| 1cz4A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.69 | 57.0 | 5.96e-01 | 97.1% | 97.8% |
| 1gsaA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.64 | 40.0 | 4.89e-01 | 95.1% | 100.0% |
| 1twfB06 | 2.40.270.10 | Mainly Beta › Beta Barrel › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6 › DNA-directed RNA polymerase, subunit 2, domain 6 | 0.63 | 55.0 | 4.33e-01 | 99.0% | 80.7% |
| 2napA04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.63 | 52.0 | 5.08e-01 | 91.2% | 100.0% |
| 2ki8A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.61 | 54.0 | 5.07e-01 | 97.1% | 89.6% |
| 7xc8A01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.61 | 52.0 | 5.03e-01 | 92.2% | 100.0% |
| 2vpzA05 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.60 | 55.0 | 4.73e-01 | 100.0% | 83.0% |
| 1n10A01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.60 | 53.0 | 5.09e-01 | 96.1% | 100.0% |
| 1h0hA04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.60 | 53.0 | 4.40e-01 | 97.1% | 75.0% |
| 5i47B02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.60 | 39.0 | 4.58e-01 | 96.1% | 100.0% |
| 2iv2X04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.58 | 51.0 | 5.19e-01 | 97.1% | 100.0% |
| 3gb0A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.55 | 44.0 | 3.27e-01 | 85.3% | 38.7% |
| 4ehcA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.55 | 44.0 | 3.28e-01 | 88.2% | 45.4% |
| 4psrA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 41.0 | 3.97e-01 | 97.1% | 69.7% |
| 4q7aA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.54 | 43.0 | 3.22e-01 | 84.3% | 40.7% |
| 6melB02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.54 | 41.0 | 4.48e-01 | 95.1% | 98.8% |
| 2nu8B02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.54 | 41.0 | 4.44e-01 | 95.1% | 98.8% |
| 2qyvA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.53 | 42.0 | 3.15e-01 | 85.3% | 41.0% |
| 3bnwB00 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.52 | 45.0 | 3.90e-01 | 96.1% | 62.4% |
| 4ewtA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.51 | 40.0 | 2.99e-01 | 85.3% | 40.1% |
| 1tufA01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.50 | 43.0 | 3.62e-01 | 97.1% | 54.5% |
ECOD (77)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5008491 | 1.1.2.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › PF27352 | 0.91 | 84.0 | 8.48e-01 | 95.1% | 100.0% |
| 5038954 | 1.1.2.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › PF27352 | 0.91 | 86.0 | 8.24e-01 | 100.0% | 99.1% |
| 3602941 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.80 | 64.0 | 6.92e-01 | 94.1% | 100.0% |
| 4946804 | 1.1.2.44 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Glycos_trans_3N | 0.78 | 62.0 | 6.72e-01 | 94.1% | 100.0% |
| 3625788 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.77 | 51.0 | 6.03e-01 | 78.4% | 98.6% |
| 4963913 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.77 | 57.0 | 6.31e-01 | 93.1% | 98.8% |
| 3706161 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.76 | 60.0 | 6.49e-01 | 97.1% | 100.0% |
| 4970929 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.76 | 60.0 | 6.53e-01 | 94.1% | 100.0% |
| 4607187 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.76 | 63.0 | 6.49e-01 | 100.0% | 93.7% |
| 3409396 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.76 | 60.0 | 6.02e-01 | 100.0% | 81.9% |
| 5076635 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.76 | 60.0 | 6.52e-01 | 94.1% | 100.0% |
| 33 | 1.1.2.15 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › PEX-2N | 0.76 | 59.0 | 6.45e-01 | 96.1% | 100.0% |
| 4941448 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.75 | 60.0 | 6.46e-01 | 93.1% | 100.0% |
| 3842541 | 1.1.2.38 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_PEX6 | 0.75 | 66.0 | 6.44e-01 | 94.1% | 99.1% |
| 3486347 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.75 | 62.0 | 6.38e-01 | 97.1% | 93.7% |
| 4445483 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.75 | 59.0 | 6.36e-01 | 93.1% | 98.8% |
| 4263053 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.75 | 59.0 | 6.41e-01 | 93.1% | 100.0% |
| 4171290 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.75 | 59.0 | 6.42e-01 | 93.1% | 100.0% |
| 5055583 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.75 | 59.0 | 6.42e-01 | 93.1% | 100.0% |
| 5045002 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.75 | 60.0 | 6.32e-01 | 98.0% | 95.6% |
| 4986590 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.75 | 58.0 | 6.27e-01 | 93.1% | 97.6% |
| 4931749 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.75 | 59.0 | 6.38e-01 | 93.1% | 100.0% |
| 3725766 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.75 | 64.0 | 6.58e-01 | 98.0% | 97.9% |
| 3611762 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.74 | 60.0 | 6.21e-01 | 99.0% | 91.6% |
| 5041263 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.74 | 59.0 | 6.36e-01 | 93.1% | 100.0% |
| 5037727 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.74 | 59.0 | 6.37e-01 | 93.1% | 100.0% |
| 5060748 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.74 | 63.0 | 6.12e-01 | 96.1% | 83.6% |
| 4488210 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.74 | 57.0 | 6.22e-01 | 93.1% | 97.6% |
| 4108919 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.74 | 58.0 | 6.32e-01 | 93.1% | 100.0% |
| 3187087 | 1.1.2.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › RdRP | 0.74 | 65.0 | 6.06e-01 | 95.1% | 93.6% |
| 5043151 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.74 | 55.0 | 6.15e-01 | 90.2% | 100.0% |
| 5074983 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.74 | 60.0 | 6.39e-01 | 97.1% | 98.9% |
| 4970875 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.73 | 58.0 | 6.23e-01 | 99.0% | 100.0% |
| 4241168 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.73 | 55.0 | 6.10e-01 | 88.2% | 100.0% |
| 4981335 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.73 | 58.0 | 6.26e-01 | 93.1% | 100.0% |
| 3783660 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.73 | 61.0 | 6.23e-01 | 100.0% | 92.0% |
| 3684523 | 1.1.2.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 | 0.73 | 64.0 | 5.94e-01 | 98.0% | 76.8% |
| 3670775 | 1.1.2.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 | 0.73 | 64.0 | 6.02e-01 | 98.0% | 80.0% |
| 4526788 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.73 | 54.0 | 6.02e-01 | 91.2% | 100.0% |
| 3391397 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.73 | 59.0 | 6.26e-01 | 96.1% | 98.9% |
| 4402984 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.72 | 61.0 | 6.11e-01 | 90.2% | 100.0% |
| 4024752 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.72 | 61.0 | 6.16e-01 | 100.0% | 92.0% |
| 4013955 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.72 | 64.0 | 5.98e-01 | 97.1% | 100.0% |
| 4947745 | 1.1.2.45 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_2 | 0.72 | 59.0 | 6.26e-01 | 97.1% | 100.0% |
| 3688059 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.72 | 64.0 | 5.40e-01 | 97.1% | 79.4% |
| 4087090 | 1.1.2.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox | 0.72 | 57.0 | 5.20e-01 | 97.1% | 64.4% |
| None | — | 0.71 | 60.0 | 6.32e-01 | 97.1% | 100.0% | |
| 5001485 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.71 | 56.0 | 6.07e-01 | 93.1% | 100.0% |
| 4121830 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.71 | 63.0 | 6.40e-01 | 96.1% | 100.0% |
| 3332068 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.71 | 61.0 | 5.25e-01 | 92.2% | 100.0% |
| 4995354 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.71 | 56.0 | 6.03e-01 | 93.1% | 100.0% |
| 3360997 | 1.1.2.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 | 0.71 | 64.0 | 5.67e-01 | 98.0% | 78.6% |
| 3742498 | 1.1.2.22 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N_fung | 0.70 | 62.0 | 5.93e-01 | 95.1% | 97.4% |
| 3772228 | 1.1.2.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › PEX6_vert_N | 0.70 | 61.0 | 5.59e-01 | 94.1% | 76.9% |
| 3972722 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.69 | 58.0 | 5.32e-01 | 89.2% | 89.2% |
| 5053173 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.69 | 56.0 | 5.82e-01 | 99.0% | 93.7% |
| 3169042 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.69 | 58.0 | 5.85e-01 | 100.0% | 91.0% |
| 3888411 | 1.1.2.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › PEX6_vert_N | 0.69 | 60.0 | 6.02e-01 | 96.1% | 100.0% |
| 4487888 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.67 | 56.0 | 5.76e-01 | 89.2% | 100.0% |
| 5006288 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.67 | 58.0 | 5.78e-01 | 93.1% | 91.4% |
| 4270657 | 1.1.2.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › N1_PEX6 | 0.67 | 55.0 | 5.77e-01 | 97.1% | 100.0% |
| 3948899 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.66 | 60.0 | 5.29e-01 | 98.0% | 82.1% |
| 3725968 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.65 | 55.0 | 5.21e-01 | 91.2% | 100.0% |
| 5077330 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.64 | 58.0 | 5.76e-01 | 97.1% | 99.0% |
| 4048983 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.63 | 55.0 | 5.52e-01 | 96.1% | 99.0% |
| 4951261 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.63 | 52.0 | 4.98e-01 | 89.2% | 88.3% |
| 5078730 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.62 | 50.0 | 4.50e-01 | 87.3% | 87.9% |
| 2595014 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.62 | 53.0 | 4.55e-01 | 94.1% | 82.1% |
| 4989928 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.61 | 54.0 | 5.13e-01 | 96.1% | 97.5% |
| 4871383 | 1.1.2.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › N1_PEX6 | 0.61 | 51.0 | 5.31e-01 | 93.1% | 100.0% |
| 3701559 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.60 | 55.0 | 5.20e-01 | 100.0% | 90.8% |
| 4948295 | 1.1.2.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › MacB_PCD | 0.60 | 49.0 | 4.03e-01 | 89.2% | 56.8% |
| 4981284 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 45.0 | 4.82e-01 | 96.1% | 95.3% |
| 4988786 | 1.1.2.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › MacB_PCD | 0.59 | 47.0 | 4.72e-01 | 87.3% | 89.5% |
| 3652557 | 1.1.2.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 | 0.57 | 43.0 | 4.54e-01 | 79.4% | 96.7% |
| 3728553 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 40.0 | 4.18e-01 | 96.1% | 94.7% |
| 3635586 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 43.0 | 4.03e-01 | 97.1% | 99.2% |