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rifcsphigho2_12_scaffold_16_prodigal-single.1__X__X__00301

Bact-Vir

rifcsphigho2_12_scaffold_16_prodigal-single.1__X__X__00301

Identity

Kingdom:
phage

Quality

61.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-86
PDB
CATH (93)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1urrA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.81 64.0 6.11e-01 83.3% 79.4%
2jzxA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.81 58.0 6.04e-01 75.0% 89.9%
7qh2C03 3.30.70.2740 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.81 60.0 6.24e-01 77.4% 97.4%
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.81 62.0 6.23e-01 81.0% 88.2%
3vtiA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.80 63.0 6.06e-01 83.3% 78.1%
4oj3B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.80 64.0 6.12e-01 84.5% 80.0%
1apsA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.80 64.0 6.05e-01 84.5% 79.6%
2khdA00 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.80 59.0 5.39e-01 77.4% 68.5%
2l48A00 3.30.70.2030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.79 66.0 6.62e-01 97.6% 88.2%
3dfeA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.79 63.0 6.38e-01 83.3% 86.6%
2cveA02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.79 59.0 6.56e-01 83.3% 100.0%
1vi7A02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.79 58.0 6.25e-01 82.1% 91.5%
1khmA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.79 58.0 5.73e-01 77.4% 80.9%
2wbmA03 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.79 59.0 6.40e-01 83.3% 95.7%
3trgA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.78 62.0 5.95e-01 83.3% 79.8%
1u8sA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.77 61.0 6.05e-01 83.3% 90.7%
3n79A01 3.30.70.1710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain 0.77 60.0 6.26e-01 83.3% 91.0%
3tm4A01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.77 57.0 4.34e-01 78.6% 42.9%
2anrA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.76 57.0 6.02e-01 78.6% 94.7%
2kjwA00 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.76 59.0 5.71e-01 83.3% 83.3%
3onqA02 3.30.70.2730 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.76 59.0 6.01e-01 82.1% 91.4%
2axyA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.76 57.0 6.08e-01 78.6% 98.6%
1j4wA01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.76 57.0 6.00e-01 78.6% 98.6%
3pm9A04 3.30.70.2740 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.76 58.0 5.80e-01 82.1% 100.0%
3rrkA03 3.30.70.2750 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.75 58.0 6.15e-01 83.3% 93.2%
2lxfA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.75 59.0 5.24e-01 84.5% 63.6%
2n8lA00 3.30.310.210 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.74 61.0 4.71e-01 90.5% 53.4%
3evzA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.74 53.0 4.16e-01 73.8% 54.8%
2jheA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.74 55.0 5.64e-01 79.8% 85.2%
2joqA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.74 56.0 5.87e-01 81.0% 100.0%
2cteA01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.74 54.0 5.59e-01 77.4% 88.6%
2a10D00 3.30.70.1710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain 0.74 57.0 5.40e-01 83.3% 73.5%
1sc6A03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.74 56.0 5.74e-01 82.1% 90.2%
2ia0B02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.73 57.0 5.37e-01 82.1% 73.7%
3im8A02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.73 54.0 5.69e-01 83.3% 90.4%
1darA05 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.73 55.0 5.45e-01 83.3% 77.0%
1yj7B01 3.30.70.1530 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 0.73 52.0 5.54e-01 75.0% 87.3%
2cyyA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.73 56.0 5.43e-01 82.1% 74.7%
3tviA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.73 56.0 4.53e-01 82.1% 46.5%
3mtjA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.73 60.0 6.24e-01 89.3% 97.4%
2ewhA01 3.30.70.1710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain 0.73 56.0 5.59e-01 82.1% 85.9%
3e3xA01 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.72 56.0 5.03e-01 82.1% 69.9%
4ctaA02 3.30.70.2860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.72 56.0 5.84e-01 83.3% 96.0%
1s7hA02 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.72 56.0 5.74e-01 84.5% 91.5%
1qupA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.72 54.0 5.79e-01 83.3% 95.7%
3ibwA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.71 55.0 5.65e-01 83.3% 93.7%
2mzjA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.71 54.0 5.55e-01 82.1% 97.6%
2yweA03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.71 54.0 5.50e-01 82.1% 90.2%
3im9A02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.71 54.0 5.65e-01 83.3% 93.2%
4nohA01 3.30.70.3060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.71 53.0 5.63e-01 82.1% 94.4%
4ushA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 62.0 5.85e-01 98.8% 86.4%
4rl1A02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.70 53.0 5.70e-01 83.3% 95.8%
3ezjA02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.70 53.0 5.80e-01 84.5% 98.5%
4ch7A02 3.30.70.3460 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 57.0 4.33e-01 86.9% 64.5%
3c1mA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.70 54.0 4.33e-01 83.3% 49.4%
2b4vA03 3.30.70.1970 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 54.0 5.12e-01 83.3% 80.8%
3tqeA02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.69 52.0 5.53e-01 83.3% 93.2%
2uvaG03 3.30.70.3320 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 59.0 5.46e-01 95.2% 91.7%
2re1A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.69 52.0 5.52e-01 82.1% 97.3%
2g9oA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 52.0 5.45e-01 82.1% 96.1%
2dbbA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.68 53.0 5.16e-01 83.3% 80.6%
1kn6A00 3.30.70.850 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8, pro-domain 0.68 53.0 5.65e-01 83.3% 97.3%
1lxjA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 57.0 5.27e-01 89.3% 75.7%
1qm9A02 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.67 52.0 5.11e-01 83.3% 86.5%
2qz8A02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.67 51.0 5.23e-01 82.1% 87.7%
1utaA00 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.67 52.0 5.38e-01 84.5% 92.2%
2ctkA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.67 56.0 5.23e-01 91.7% 77.9%
2rt3A00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.66 56.0 5.41e-01 95.2% 82.5%
5flmA02 3.30.1360.140 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.66 49.0 4.17e-01 78.6% 83.1%
3zxoA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.66 47.0 4.15e-01 75.0% 100.0%
2p92A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.66 54.0 5.26e-01 91.7% 93.7%
2yweA04 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 58.0 5.24e-01 97.6% 92.1%
2aymA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.65 54.0 5.42e-01 90.5% 92.8%
2f06A00 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.65 53.0 4.47e-01 89.3% 95.1%
1b24A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.63 45.0 4.39e-01 76.2% 77.9%
4ezeB00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.63 47.0 3.31e-01 82.1% 24.9%
2vs7A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.62 49.0 5.14e-01 84.5% 93.6%
4kvxA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.62 44.0 3.61e-01 73.8% 98.7%
1i94H01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.62 44.0 4.62e-01 76.2% 85.9%
2cy2A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.61 44.0 3.51e-01 76.2% 99.4%
4dzdA01 3.30.70.1200 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 1 0.61 44.0 4.69e-01 82.1% 91.4%
7n0eB02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.60 42.0 3.75e-01 72.6% 100.0%
3d7aA01 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.60 47.0 4.03e-01 84.5% 82.4%
1rwuA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.60 52.0 5.16e-01 97.6% 97.7%
4i68A00 3.30.70.1800 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 47.0 4.60e-01 89.3% 78.9%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.60 43.0 4.48e-01 76.2% 84.0%
4dzrA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 42.0 3.45e-01 73.8% 58.3%
3fncB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.60 41.0 3.37e-01 72.6% 97.5%
2dchX01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.57 48.0 4.71e-01 98.8% 82.8%
4k59A00 2.60.40.4380 Mainly Beta › Sandwich › Immunoglobulin-like › Translational regulator CsrA 0.54 39.0 4.38e-01 76.2% 98.5%
1vx7G00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.54 41.0 3.70e-01 84.5% 65.3%
2gukA00 3.30.2190.10 Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like 0.52 46.0 4.17e-01 95.2% 76.6%
1kyzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 38.0 3.65e-01 81.0% 73.8%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3218069 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.87 59.0 6.69e-01 70.2% 100.0%
3403703 304.110.1.0 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like 0.86 68.0 6.24e-01 83.3% 83.8%
4297401 304.110.1.0 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like 0.83 64.0 6.56e-01 81.0% 93.8%
4134771 304.110.1.1 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Acylphosphatase 0.83 66.0 6.43e-01 83.3% 83.3%
4987876 304.110.1.1 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Acylphosphatase 0.83 64.0 6.37e-01 81.0% 83.5%
3387953 304.162.1.0 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain 0.82 63.0 6.85e-01 81.0% 100.0%
3176762 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.82 63.0 6.18e-01 81.0% 75.6%
5040207 304.162.1.2 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M 0.82 62.0 6.72e-01 79.8% 100.0%
4112187 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.82 62.0 6.71e-01 84.5% 95.7%
3847949 327.11.2.4 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › MOEP19 0.82 60.0 5.49e-01 76.2% 66.7%
4057430 304.110.1.1 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Acylphosphatase 0.81 64.0 6.11e-01 83.3% 78.9%
4318283 304.110.1.1 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Acylphosphatase 0.80 64.0 6.30e-01 84.5% 85.6%
3236493 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.80 56.0 6.29e-01 72.6% 98.5%
4582873 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.80 59.0 6.35e-01 76.2% 100.0%
3318771 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.80 58.0 5.72e-01 76.2% 77.8%
4979822 304.110.1.1 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Acylphosphatase 0.80 63.0 5.93e-01 83.3% 75.0%
3603204 304.110.1.1 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Acylphosphatase 0.80 59.0 6.65e-01 81.0% 100.0%
3969035 304.24.1.2 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF1949 0.80 61.0 6.56e-01 83.3% 95.7%
4984986 304.162.1.2 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M 0.80 58.0 6.52e-01 76.2% 100.0%
3519958 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.80 56.0 6.10e-01 73.8% 100.0%
3173046 304.162.1.2 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M 0.80 62.0 6.07e-01 82.1% 86.5%
144952 304.5.1.10 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CBD_PlyG 0.79 66.0 6.62e-01 97.6% 88.2%
4982458 304.162.1.2 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M 0.79 60.0 6.50e-01 79.8% 98.6%
4211715 304.110.1.1 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Acylphosphatase 0.79 62.0 5.77e-01 83.3% 72.4%
3772559 304.159.1.3 a+b two layers › Alpha-beta plaits › Alpha-beta plait domain in NisB › Alpha-beta plait domain in NisB › KH_Vigilin 0.79 62.0 5.33e-01 83.3% 63.1%
3720044 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.79 67.0 6.58e-01 89.3% 94.4%
3599892 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.79 60.0 5.93e-01 83.3% 75.6%
3575847 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.79 62.0 5.54e-01 83.3% 75.7%
3214986 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.79 58.0 5.97e-01 77.4% 91.3%
4654074 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.78 59.0 5.81e-01 84.5% 74.4%
4959437 304.162.1.2 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M 0.78 57.0 6.40e-01 78.6% 100.0%
5061510 304.54.1.1 a+b two layers › Alpha-beta plaits › CcmK-like › CcmK-like › BMC 0.78 61.0 5.88e-01 83.3% 75.8%
4952784 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.78 62.0 6.07e-01 85.7% 78.9%
3411905 327.11.2.20 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › BICC1_KH 0.78 56.0 6.25e-01 75.0% 98.5%
4033642 304.8.1.42 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF3388 0.78 60.0 5.79e-01 82.1% 77.9%
5064356 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.78 54.0 5.72e-01 82.1% 81.3%
4003644 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.77 64.0 4.95e-01 88.1% 53.7%
3637642 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.77 60.0 5.46e-01 82.1% 70.9%
4283073 304.162.1.2 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M 0.77 55.0 6.19e-01 75.0% 98.5%
5077094 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.77 58.0 5.67e-01 83.3% 74.4%
4033765 304.24.1.1 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C 0.76 58.0 5.69e-01 83.3% 75.6%
3396525 327.11.2.20 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › BICC1_KH 0.76 54.0 5.72e-01 75.0% 100.0%
4332273 304.24.1.1 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C 0.76 57.0 5.58e-01 83.3% 74.4%
4220147 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.75 60.0 6.03e-01 85.7% 84.7%
3519959 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.75 53.0 5.83e-01 72.6% 98.5%
5048300 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.75 58.0 5.41e-01 82.1% 69.5%
3864360 327.11.2.20 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › BICC1_KH 0.75 56.0 5.80e-01 79.8% 100.0%
3588197 304.8.1.8 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 0.75 58.0 5.79e-01 82.1% 88.2%
4935067 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.75 60.0 6.00e-01 85.7% 84.7%
5026370 304.110.1.1 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Acylphosphatase 0.75 65.0 6.11e-01 92.9% 79.8%
3591080 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.75 58.0 5.98e-01 83.3% 91.3%
4992013 304.4.1.80 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF790 0.74 66.0 5.62e-01 100.0% 65.0%
3165390 304.24.1.36 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SPOR 0.74 56.0 5.78e-01 81.0% 85.0%
5023057 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.74 57.0 5.95e-01 85.7% 90.7%
4953568 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.73 56.0 5.84e-01 82.1% 90.7%
3708065 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.73 55.0 5.82e-01 83.3% 91.8%
5066425 304.5.1.7 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.73 57.0 5.86e-01 89.3% 88.7%
4669972 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.72 56.0 5.13e-01 83.3% 63.6%
5028016 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.72 55.0 5.93e-01 84.5% 97.1%
4972516 304.4.1.1 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.72 55.0 5.66e-01 82.1% 88.7%
3555254 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.72 58.0 5.92e-01 85.7% 96.2%
3596207 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.72 58.0 5.80e-01 90.5% 85.2%
3695902 304.24.1.1 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C 0.71 60.0 4.59e-01 92.9% 67.2%
3287011 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.71 52.0 5.61e-01 81.0% 92.9%
3388222 331.2.1.1 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.71 51.0 5.40e-01 76.2% 97.3%
4483441 304.14.1.0 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) 0.71 54.0 5.70e-01 83.3% 93.3%
4133554 304.24.1.21 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C+EFG_III 0.71 60.0 4.59e-01 92.9% 66.8%
5010188 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.71 45.0 4.86e-01 72.6% 77.1%
3839430 331.2.1.1 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.71 52.0 5.45e-01 77.4% 98.7%
4939641 304.4.1.1 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.71 55.0 5.60e-01 83.3% 88.7%
4422539 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.70 59.0 5.46e-01 94.0% 88.2%
4643299 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.70 53.0 5.37e-01 82.1% 84.7%
2507455 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.70 51.0 5.49e-01 82.1% 93.0%
4063927 304.24.1.1 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C 0.70 59.0 4.52e-01 92.9% 66.3%
4092984 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.69 60.0 4.23e-01 95.2% 85.5%
4060463 304.4.1.1 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.69 54.0 5.22e-01 83.3% 80.6%
4937181 305.1.1.2 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 0.69 50.0 5.14e-01 76.2% 80.0%
4931771 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.69 53.0 5.05e-01 83.3% 76.0%
2870852 304.11.1.1 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Acyl_transf_1 0.68 51.0 5.15e-01 83.3% 79.8%
5047006 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.68 52.0 4.79e-01 83.3% 62.7%
5077993 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.68 52.0 5.27e-01 83.3% 88.2%
167371 304.8.1.21 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 0.68 50.0 5.27e-01 77.4% 94.4%
3604277 327.11.2.82 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF27275 0.68 49.0 5.17e-01 78.6% 84.0%
5045299 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.68 51.0 4.43e-01 82.1% 52.3%
4030325 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.68 52.0 4.72e-01 83.3% 74.8%
5022357 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.67 46.0 5.38e-01 82.1% 100.0%
5054910 304.7.1.0 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.67 57.0 5.55e-01 95.2% 89.5%
3704224 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.66 51.0 4.97e-01 84.5% 78.9%
3666051 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.65 50.0 5.09e-01 82.1% 97.5%
4971295 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.64 50.0 4.79e-01 83.3% 85.3%
5051463 304.54.1.0 a+b two layers › Alpha-beta plaits › CcmK-like › CcmK-like 0.63 50.0 5.13e-01 86.9% 95.0%
5075416 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.61 50.0 4.54e-01 86.9% 72.7%
3974161 304.13.1.1 a+b two layers › Alpha-beta plaits › Hypothetical protein VC0424 › Hypothetical protein VC0424 › RraB 0.61 54.0 4.91e-01 100.0% 89.4%
4999898 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.61 47.0 4.68e-01 86.9% 78.9%
3386960 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.57 42.0 4.60e-01 81.0% 100.0%
4017553 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.57 45.0 4.34e-01 84.5% 85.3%
3743748 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 42.0 4.14e-01 81.0% 88.9%
4998391 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.53 46.0 4.59e-01 98.8% 97.8%
5620 320.3.1.1 a+b two layers › R3H domain-like › PG1857-like › PG1857-like › DUF2023 0.52 46.0 4.18e-01 95.2% 76.6%