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rifcsphigho2_12_scaffold_16_prodigal-single.1__X__X__00559
Bact-Virrifcsphigho2_12_scaffold_16_prodigal-single.1__X__X__00559
Identity
- Kingdom:
- phage
Quality
89.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 110-203
Domain cluster:
rep: IMGVR_UViG_3300010232_000025-3300010232-Ga0136447_100191326__D200-293
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00382.25 best | TFIIB | 86.6 | 1.30e-24 | 97.9% | 95.7% |
CATH (56)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1c9bA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.97 | 90.0 | 8.91e-01 | 95.7% | 92.8% |
| 1aisB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.97 | 90.0 | 8.83e-01 | 95.7% | 90.9% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.97 | 87.0 | 8.72e-01 | 94.7% | 92.6% |
| 2i53A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.94 | 90.0 | 7.59e-01 | 100.0% | 74.8% |
| 1c9bA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.93 | 83.0 | 7.92e-01 | 95.7% | 82.1% |
| 2ivxB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.93 | 88.0 | 7.52e-01 | 100.0% | 80.0% |
| 5xs2B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.92 | 87.0 | 7.62e-01 | 100.0% | 84.1% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.92 | 86.0 | 8.30e-01 | 98.9% | 93.2% |
| 1guxB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.90 | 85.0 | 7.26e-01 | 100.0% | 81.6% |
| 7ml0M01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.90 | 75.0 | 8.04e-01 | 87.2% | 100.0% |
| 2w96A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.89 | 84.0 | 7.86e-01 | 100.0% | 85.8% |
| 1w98B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.89 | 85.0 | 7.84e-01 | 100.0% | 86.0% |
| 4bbrM00 | 1.10.472.170 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.89 | 83.0 | 6.39e-01 | 100.0% | 48.2% |
| 7jv7B01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.89 | 84.0 | 7.10e-01 | 100.0% | 74.0% |
| 1zp2A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.89 | 84.0 | 7.86e-01 | 100.0% | 92.9% |
| 1f5qB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.89 | 84.0 | 7.92e-01 | 100.0% | 90.8% |
| 1jkwA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.88 | 82.0 | 6.54e-01 | 100.0% | 58.5% |
| 3h4cA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.88 | 83.0 | 8.28e-01 | 98.9% | 97.9% |
| 6z4xA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.87 | 81.0 | 6.75e-01 | 100.0% | 61.3% |
| 2f2cA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.87 | 82.0 | 7.72e-01 | 100.0% | 86.2% |
| 2f2cA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.84 | 76.0 | 7.31e-01 | 96.8% | 92.5% |
| 2b9rA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.84 | 74.0 | 6.38e-01 | 96.8% | 63.6% |
| 2ivxB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.83 | 75.0 | 6.99e-01 | 96.8% | 83.5% |
| 1vinA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.83 | 75.0 | 6.48e-01 | 96.8% | 66.9% |
| 1jkwA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.82 | 73.0 | 7.17e-01 | 95.7% | 98.0% |
| 4f7nB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.81 | 76.0 | 6.61e-01 | 100.0% | 71.3% |
| 2i53A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.81 | 75.0 | 7.10e-01 | 100.0% | 89.2% |
| 4yozA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.80 | 73.0 | 5.87e-01 | 100.0% | 68.3% |
| 1zp2A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.79 | 69.0 | 6.42e-01 | 96.8% | 76.5% |
| 3m03B00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.76 | 68.0 | 6.84e-01 | 96.8% | 94.7% |
| 2lyiA01 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.74 | 62.0 | 5.26e-01 | 89.4% | 79.7% |
| 3nz4B03 | 1.10.274.20 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 | 0.73 | 56.0 | 5.46e-01 | 81.9% | 86.5% |
| 3umbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.72 | 50.0 | 5.40e-01 | 71.3% | 96.2% |
| 2mqaA00 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.72 | 55.0 | 5.01e-01 | 81.9% | 66.4% |
| 1px5A02 | 1.10.1410.20 | Mainly Alpha › Orthogonal Bundle › Poly(a)-polymerase, middle domain › 2'-5'-oligoadenylate synthetase 1, domain 2 | 0.67 | 59.0 | 4.73e-01 | 98.9% | 79.0% |
| 2g8lB01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.65 | 43.0 | 4.89e-01 | 73.4% | 95.5% |
| 1p8dB00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.65 | 56.0 | 4.21e-01 | 96.8% | 79.9% |
| 4rflA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.65 | 54.0 | 4.26e-01 | 91.5% | 79.9% |
| 3x1oA00 | 1.20.120.1790 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.65 | 48.0 | 4.19e-01 | 79.8% | 98.0% |
| 2pq7A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.63 | 55.0 | 4.54e-01 | 98.9% | 74.0% |
| 1a9xA04 | 1.10.1030.10 | Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain | 0.62 | 37.0 | 3.17e-01 | 79.8% | 36.7% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.62 | 47.0 | 4.89e-01 | 83.0% | 88.4% |
| 6ig5A01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.60 | 46.0 | 4.08e-01 | 83.0% | 61.6% |
| 3dtoA01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.60 | 48.0 | 4.94e-01 | 92.6% | 96.6% |
| 4bxoA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.59 | 38.0 | 4.27e-01 | 80.9% | 89.6% |
| 2qgsB01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.59 | 49.0 | 5.04e-01 | 92.6% | 97.7% |
| 1tj7A01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.59 | 45.0 | 4.34e-01 | 81.9% | 78.1% |
| 6axfA01 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.58 | 32.0 | 3.04e-01 | 88.3% | 42.7% |
| 2e9fB01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.57 | 43.0 | 4.32e-01 | 81.9% | 84.4% |
| 2hpsA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.56 | 48.0 | 3.89e-01 | 95.7% | 75.5% |
| 3d1uA03 | 1.20.1270.240 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.56 | 45.0 | 4.42e-01 | 100.0% | 82.2% |
| 3k7dA01 | 1.20.120.1510 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.55 | 45.0 | 4.24e-01 | 100.0% | 75.2% |
| 4hteA01 | 1.20.58.1730 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 40.0 | 3.45e-01 | 75.5% | 92.3% |
| 3f2eA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 43.0 | 4.50e-01 | 86.2% | 97.6% |
| 1lq7A00 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.51 | 35.0 | 3.92e-01 | 79.8% | 98.5% |
| 2a3vB01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.51 | 45.0 | 4.51e-01 | 95.7% | 97.9% |
ECOD (99)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4963102 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 1.00 | 97.0 | 7.12e-01 | 98.9% | 45.6% |
| 4943135 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 1.00 | 97.0 | 7.80e-01 | 100.0% | 58.7% |
| 4942375 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.99 | 97.0 | 7.28e-01 | 100.0% | 48.5% |
| 5025138 | 101.1.10.80 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Zn_Ribbon_TF | 0.99 | 95.0 | 7.06e-01 | 97.9% | 46.0% |
| 5042604 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.99 | 97.0 | 7.86e-01 | 100.0% | 61.9% |
| 4999997 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.99 | 92.0 | 9.16e-01 | 94.7% | 93.7% |
| 4405476 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.99 | 95.0 | 7.02e-01 | 97.9% | 46.0% |
| 4994316 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.99 | 96.0 | 8.12e-01 | 100.0% | 67.1% |
| 4122752 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.99 | 96.0 | 8.01e-01 | 100.0% | 64.8% |
| 5042605 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.98 | 89.0 | 8.97e-01 | 92.6% | 93.5% |
| 4061047 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.98 | 96.0 | 7.86e-01 | 100.0% | 62.7% |
| 4929178 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.98 | 95.0 | 7.05e-01 | 100.0% | 45.9% |
| 5023607 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.98 | 95.0 | 7.94e-01 | 100.0% | 64.8% |
| 4943136 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.98 | 87.0 | 8.93e-01 | 91.5% | 95.6% |
| 4944102 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.98 | 88.0 | 9.01e-01 | 95.7% | 96.7% |
| 4999627 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.98 | 93.0 | 7.96e-01 | 97.9% | 68.1% |
| 4273747 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.97 | 95.0 | 7.78e-01 | 100.0% | 66.0% |
| 4978149 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.97 | 93.0 | 9.33e-01 | 98.9% | 97.9% |
| 4938108 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.97 | 94.0 | 7.86e-01 | 100.0% | 64.8% |
| 3227203 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.97 | 94.0 | 7.76e-01 | 100.0% | 62.7% |
| 4947863 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.97 | 87.0 | 8.95e-01 | 95.7% | 96.7% |
| 5051285 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.97 | 94.0 | 7.46e-01 | 100.0% | 57.0% |
| 4956629 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.97 | 87.0 | 8.13e-01 | 95.7% | 79.1% |
| 3194347 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.97 | 93.0 | 7.60e-01 | 100.0% | 60.6% |
| 5053417 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.97 | 93.0 | 7.69e-01 | 100.0% | 62.7% |
| 4970309 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.96 | 91.0 | 9.11e-01 | 97.9% | 96.8% |
| 5076381 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.96 | 91.0 | 8.88e-01 | 97.9% | 92.0% |
| 4945282 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.96 | 89.0 | 8.23e-01 | 100.0% | 78.9% |
| 4927465 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.96 | 93.0 | 7.19e-01 | 100.0% | 55.6% |
| 4956628 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.96 | 93.0 | 7.86e-01 | 100.0% | 67.1% |
| 4947168 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.96 | 89.0 | 9.14e-01 | 100.0% | 100.0% |
| 4982983 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.96 | 90.0 | 8.96e-01 | 96.8% | 95.8% |
| 3721781 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.96 | 92.0 | 7.36e-01 | 100.0% | 57.0% |
| 5026540 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.96 | 92.0 | 8.82e-01 | 100.0% | 89.5% |
| 4996071 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.96 | 87.0 | 8.88e-01 | 95.7% | 97.8% |
| 4969272 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.95 | 92.0 | 8.28e-01 | 100.0% | 83.3% |
| 5037039 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.95 | 88.0 | 7.81e-01 | 100.0% | 72.0% |
| 2754206 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.95 | 92.0 | 8.83e-01 | 100.0% | 91.3% |
| 5061156 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.95 | 91.0 | 8.25e-01 | 100.0% | 78.3% |
| 4961655 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.95 | 85.0 | 8.49e-01 | 95.7% | 91.6% |
| 5025139 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.95 | 88.0 | 8.81e-01 | 96.8% | 94.7% |
| 5037673 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.95 | 87.0 | 8.15e-01 | 96.8% | 80.9% |
| 4550536 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.95 | 85.0 | 8.69e-01 | 94.7% | 96.7% |
| 3378930 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.95 | 91.0 | 8.10e-01 | 100.0% | 75.2% |
| 3890040 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.95 | 91.0 | 7.75e-01 | 100.0% | 67.1% |
| 5067099 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.95 | 91.0 | 7.83e-01 | 100.0% | 75.6% |
| 4929479 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.95 | 87.0 | 8.96e-01 | 100.0% | 100.0% |
| 3668562 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.95 | 91.0 | 7.28e-01 | 100.0% | 69.1% |
| 3703267 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.94 | 90.0 | 8.16e-01 | 100.0% | 86.7% |
| 3647820 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.94 | 90.0 | 7.03e-01 | 100.0% | 65.2% |
| 5053418 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.94 | 86.0 | 8.79e-01 | 100.0% | 98.9% |
| 4927466 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.94 | 83.0 | 8.48e-01 | 91.5% | 95.6% |
| 5000182 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.94 | 82.0 | 7.81e-01 | 90.4% | 81.9% |
| 3352321 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.94 | 86.0 | 8.09e-01 | 96.8% | 81.8% |
| 4000036 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.94 | 74.0 | 6.41e-01 | 81.9% | 57.0% |
| 3443564 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.94 | 90.0 | 7.26e-01 | 100.0% | 71.9% |
| 3610169 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.94 | 89.0 | 6.44e-01 | 100.0% | 45.2% |
| 5000679 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.93 | 83.0 | 7.79e-01 | 94.7% | 79.1% |
| 3554649 | 101.1.10.34 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N+CycT2-like_C | 0.93 | 89.0 | 6.21e-01 | 100.0% | 41.2% |
| 3204144 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.93 | 89.0 | 7.81e-01 | 100.0% | 73.1% |
| 3756619 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.93 | 89.0 | 7.39e-01 | 100.0% | 74.7% |
| 3627307 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.93 | 89.0 | 6.93e-01 | 100.0% | 56.7% |
| 4962267 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.93 | 86.0 | 8.79e-01 | 100.0% | 100.0% |
| 3787293 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.93 | 89.0 | 7.91e-01 | 100.0% | 75.2% |
| 3781919 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.93 | 87.0 | 7.85e-01 | 97.9% | 76.5% |
| 3739922 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.93 | 89.0 | 7.47e-01 | 100.0% | 79.3% |
| 3598088 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.93 | 88.0 | 7.76e-01 | 100.0% | 82.3% |
| 4927193 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.93 | 89.0 | 8.53e-01 | 100.0% | 91.4% |
| 4452148 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.93 | 88.0 | 6.89e-01 | 100.0% | 52.2% |
| 3526937 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.93 | 88.0 | 7.53e-01 | 100.0% | 79.3% |
| 3823869 | 101.1.10.2 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N,Cyclin_C_2 | 0.93 | 88.0 | 5.87e-01 | 100.0% | 29.8% |
| 4193687 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.93 | 88.0 | 5.96e-01 | 100.0% | 36.2% |
| 5073287 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.92 | 88.0 | 6.94e-01 | 100.0% | 58.9% |
| 3255346 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.92 | 88.0 | 7.72e-01 | 100.0% | 86.2% |
| 5064398 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.92 | 87.0 | 8.51e-01 | 97.9% | 92.0% |
| 3346165 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.92 | 88.0 | 6.22e-01 | 100.0% | 38.4% |
| 3742639 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.92 | 88.0 | 7.29e-01 | 100.0% | 80.7% |
| 3655226 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.92 | 87.0 | 7.55e-01 | 100.0% | 71.1% |
| 3783884 | 101.1.10.2 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N,Cyclin_C_2 | 0.91 | 87.0 | 5.77e-01 | 100.0% | 29.9% |
| 5025028 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.91 | 80.0 | 8.07e-01 | 91.5% | 92.5% |
| 3721805 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.91 | 81.0 | 7.50e-01 | 95.7% | 76.3% |
| 3249661 | 101.1.10.2 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N,Cyclin_C_2 | 0.91 | 86.0 | 6.26e-01 | 100.0% | 40.9% |
| 5000678 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.91 | 86.0 | 8.39e-01 | 98.9% | 93.0% |
| 3190354 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.91 | 87.0 | 7.20e-01 | 100.0% | 74.0% |
| 1879330 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.91 | 80.0 | 8.17e-01 | 93.6% | 95.6% |
| 3476361 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.91 | 86.0 | 7.79e-01 | 100.0% | 91.7% |
| 2756315 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.90 | 81.0 | 7.59e-01 | 100.0% | 80.4% |
| 3374895 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.89 | 83.0 | 7.21e-01 | 100.0% | 68.1% |
| 5025027 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.89 | 85.0 | 7.54e-01 | 100.0% | 75.2% |
| 4408837 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.89 | 84.0 | 7.09e-01 | 100.0% | 64.8% |
| 4030134 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.89 | 83.0 | 7.25e-01 | 100.0% | 70.4% |
| 4029938 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.88 | 83.0 | 6.95e-01 | 100.0% | 62.7% |
| 3723436 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.85 | 73.0 | 6.31e-01 | 91.5% | 61.4% |
| 3168672 | 101.1.10.2 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N,Cyclin_C_2 | 0.85 | 79.0 | 5.49e-01 | 100.0% | 33.6% |
| 2724222 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.85 | 79.0 | 6.42e-01 | 100.0% | 57.3% |
| 4955900 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.84 | 73.0 | 7.47e-01 | 92.6% | 100.0% |
| 3736829 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.84 | 72.0 | 6.63e-01 | 92.6% | 72.5% |
| 3940617 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.83 | 72.0 | 6.56e-01 | 91.5% | 71.7% |
| 3833444 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.81 | 73.0 | 6.76e-01 | 100.0% | 78.3% |
D2
high
residues 212-297
Domain cluster:
rep: MT764231__UXF50821.1__HQRvContig01-31__00031__D4-116
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00382.25 best | TFIIB | 80.7 | 9.20e-23 | 98.8% | 89.1% |
D3
medium
residues 7-61
Domain cluster:
rep: MN876842__QJF12345.1__ARV3-gp32__00032__D4-53
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08271.18 best | Zn_Ribbon_TF | 50.0 | 2.40e-13 | 76.4% | 97.7% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bbrM00 | 1.10.472.170 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.66 | 58.0 | 3.99e-01 | 100.0% | 31.1% |
| 1fwxA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.63 | 47.0 | 2.81e-01 | 81.8% | 53.7% |
| 1l5jA02 | 3.20.19.10 | Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 | 0.61 | 47.0 | 3.24e-01 | 85.5% | 28.0% |
| 1dl6A00 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.60 | 43.0 | 4.32e-01 | 100.0% | 74.1% |
| 1mkeA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 41.0 | 3.05e-01 | 74.5% | 66.0% |
| 1aqcB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 42.0 | 3.32e-01 | 92.7% | 95.9% |
| 3jb9K01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 45.0 | 2.84e-01 | 98.2% | 37.3% |
| 4j0wA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 44.0 | 2.72e-01 | 98.2% | 35.5% |
| 5xbfA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 34.0 | 3.08e-01 | 72.7% | 93.2% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4287145 | 375.1.1.37 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon | 0.93 | 84.0 | 8.11e-01 | 96.4% | 88.3% |
| 5025138 | 101.1.10.80 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Zn_Ribbon_TF | 0.91 | 83.0 | 5.46e-01 | 100.0% | 28.0% |
| 5053416 | 375.1.1.37 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon | 0.88 | 65.0 | 7.17e-01 | 100.0% | 93.3% |
| 4405476 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.85 | 74.0 | 4.93e-01 | 96.4% | 26.5% |
| 5023273 | 4294.1.1.12 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Zn_Ribbon_TF | 0.84 | 63.0 | 6.62e-01 | 85.5% | 88.0% |
| 4929178 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.83 | 71.0 | 4.75e-01 | 94.5% | 25.9% |
| 3488426 | 375.1.1.37 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon | 0.79 | 58.0 | 6.35e-01 | 85.5% | 95.6% |
| 4963102 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.71 | 59.0 | 4.00e-01 | 94.5% | 26.0% |
| 3808970 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 52.0 | 5.41e-01 | 96.4% | 90.0% |
| 3292956 | 375.1.1.37 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon | 0.67 | 52.0 | 5.43e-01 | 96.4% | 94.0% |
| 3461599 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 51.0 | 5.33e-01 | 85.5% | 96.0% |
| 3655225 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 50.0 | 5.23e-01 | 92.7% | 100.0% |
| 4989647 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.61 | 47.0 | 4.75e-01 | 81.8% | 89.1% |
| 3646501 | 5.1.4.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 | 0.53 | 39.0 | 2.49e-01 | 80.0% | 26.4% |
| 4888997 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.52 | 43.0 | 2.65e-01 | 100.0% | 25.2% |
| 3961639 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.51 | 37.0 | 3.69e-01 | 80.0% | 88.3% |