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rifcsplowo2_12_scaffold_23_prodigal-single.1__X__X__00016
Bact-Virrifcsplowo2_12_scaffold_23_prodigal-single.1__X__X__00016
Identity
- Kingdom:
- phage
Quality
68.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-74
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1x62A01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.81 | 57.0 | 5.87e-01 | 91.9% | 76.7% |
| 4jcjB01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.79 | 59.0 | 5.81e-01 | 96.8% | 75.4% |
| 2xjyA01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.77 | 55.0 | 5.54e-01 | 90.3% | 74.6% |
| 4hi8B00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.75 | 53.0 | 5.06e-01 | 91.9% | 63.9% |
| 3ztgA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.74 | 48.0 | 4.18e-01 | 83.9% | 44.6% |
| 7yuiB01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.74 | 49.0 | 4.38e-01 | 95.2% | 48.9% |
| 3ihpA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.70 | 46.0 | 3.78e-01 | 87.1% | 36.2% |
| 1e7lA01 | 3.40.1800.10 | Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › His-Me finger endonucleases | 0.67 | 57.0 | 5.27e-01 | 95.2% | 81.2% |
| 2ds5A00 | 6.20.220.10 | Special › Other non-globular › Erythroid Transcription Factor GATA-1; Chain A › ClpX chaperone, C4-type zinc finger domain | 0.66 | 42.0 | 4.77e-01 | 98.4% | 95.3% |
| 3l11A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.65 | 48.0 | 4.06e-01 | 87.1% | 47.1% |
| 3mekA02 | 6.10.140.2220 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 39.0 | 4.29e-01 | 72.6% | 75.5% |
| 2ku3A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.62 | 42.0 | 4.27e-01 | 95.2% | 71.0% |
| 1z2qA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.61 | 44.0 | 4.04e-01 | 83.9% | 57.1% |
| 5xfoA02 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.61 | 39.0 | 4.06e-01 | 77.4% | 71.4% |
| 1x4wA00 | 4.10.1110.10 | Few Secondary Structures › Irregular › Zf-an1 domain › AN1-like Zinc finger | 0.61 | 39.0 | 3.86e-01 | 77.4% | 61.2% |
| 1wfkA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 41.0 | 3.84e-01 | 77.4% | 57.1% |
| 4n4nB00 | 3.90.640.100 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › | 0.59 | 30.0 | 3.16e-01 | 95.2% | 50.0% |
| 2aw4Z00 | 4.10.830.30 | Few Secondary Structures › Irregular › 30s Ribosomal Protein S14; Chain N › Ribosomal protein L31 | 0.58 | 41.0 | 3.96e-01 | 74.2% | 84.3% |
| 2vp7A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 44.0 | 4.33e-01 | 96.8% | 100.0% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3848029 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.84 | 64.0 | 6.16e-01 | 93.5% | 71.4% |
| 3529042 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.84 | 59.0 | 6.50e-01 | 91.9% | 92.0% |
| 3503113 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.82 | 60.0 | 4.96e-01 | 90.3% | 45.7% |
| 3224089 | 376.1.2.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › LIM | 0.79 | 56.0 | 5.59e-01 | 87.1% | 72.3% |
| 4000690 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.78 | 59.0 | 6.48e-01 | 88.7% | 100.0% |
| 3616939 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.77 | 49.0 | 5.74e-01 | 82.3% | 100.0% |
| 4054302 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.77 | 53.0 | 6.05e-01 | 90.3% | 100.0% |
| 3270862 | 386.1.1.247 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › LIM | 0.76 | 48.0 | 5.39e-01 | 77.4% | 88.9% |
| 3169402 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.76 | 59.0 | 6.05e-01 | 93.5% | 88.3% |
| 3991863 | 376.1.2.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › LIM | 0.73 | 57.0 | 6.03e-01 | 88.7% | 94.5% |
| 3624588 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.72 | 48.0 | 4.45e-01 | 100.0% | 53.8% |
| 3372592 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.72 | 42.0 | 3.89e-01 | 80.6% | 45.0% |
| 3840547 | 376.1.2.17 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › LIM+PET | 0.71 | 52.0 | 4.25e-01 | 90.3% | 42.6% |
| 3224677 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.71 | 47.0 | 4.79e-01 | 80.6% | 71.7% |
| 3319309 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.71 | 52.0 | 4.80e-01 | 98.4% | 61.3% |
| 5032367 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.68 | 53.0 | 4.52e-01 | 91.9% | 52.0% |
| 3770713 | 376.1.1.29 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_4 | 0.68 | 44.0 | 4.03e-01 | 82.3% | 50.0% |
| 3435556 | 377.1.1.100 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RINGv | 0.68 | 49.0 | 5.40e-01 | 79.0% | 100.0% |
| 3726704 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.67 | 42.0 | 4.45e-01 | 75.8% | 73.6% |
| 3311213 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.65 | 47.0 | 4.46e-01 | 80.6% | 64.0% |
| 3240040 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.64 | 46.0 | 4.83e-01 | 90.3% | 87.3% |
| 3611182 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.64 | 45.0 | 4.18e-01 | 91.9% | 58.7% |
| 3210408 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.62 | 50.0 | 4.78e-01 | 91.9% | 82.7% |
| 3816446 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.61 | 44.0 | 4.26e-01 | 83.9% | 67.1% |
| 5066586 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.61 | 46.0 | 4.99e-01 | 96.8% | 100.0% |
| 3496550 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.61 | 44.0 | 4.18e-01 | 93.5% | 64.0% |
| 3237227 | 376.1.1.103 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_Vps41 | 0.61 | 48.0 | 4.64e-01 | 91.9% | 77.1% |
| 4936660 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.60 | 44.0 | 4.63e-01 | 88.7% | 89.1% |
| 3502501 | 376.1.1.66 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_16 | 0.60 | 48.0 | 4.60e-01 | 90.3% | 82.7% |
| 3366597 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.59 | 42.0 | 4.47e-01 | 82.3% | 90.6% |
| 3459348 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.59 | 50.0 | 4.36e-01 | 95.2% | 65.3% |
| 5049822 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.56 | 38.0 | 4.32e-01 | 74.2% | 100.0% |
| 3807699 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.56 | 40.0 | 4.05e-01 | 93.5% | 78.3% |
| 3683515 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.54 | 42.0 | 4.25e-01 | 85.5% | 98.3% |
| 3737200 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.53 | 43.0 | 4.39e-01 | 90.3% | 100.0% |
| 3181700 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.52 | 42.0 | 3.71e-01 | 90.3% | 88.4% |