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rifcsplowo2_12_scaffold_23_prodigal-single.1__X__X__00032
Bact-Virrifcsplowo2_12_scaffold_23_prodigal-single.1__X__X__00032
Identity
- Kingdom:
- phage
Quality
66.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-77
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qbyA01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.87 | 64.0 | 5.44e-01 | 78.5% | 55.3% |
| 3b0bC02 | 6.10.130.30 | Special › Helix non-globular › GTP Cyclohydrolase I; Chain A, domain 1 › | 0.85 | 54.0 | 6.52e-01 | 89.2% | 97.7% |
| 2z3xA00 | 6.10.10.80 | Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › Small, acid-soluble spore protein, alpha/beta type-like | 0.80 | 58.0 | 6.16e-01 | 75.4% | 100.0% |
| 1ng6A01 | 1.10.1510.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical Protein Yqey; Chain: A; domain1 › Uncharacterised protein YqeY/AIM41, N-terminal domain | 0.77 | 68.0 | 6.10e-01 | 100.0% | 89.0% |
| 3b0cW00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.75 | 51.0 | 4.95e-01 | 90.8% | 63.0% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.72 | 45.0 | 4.04e-01 | 72.3% | 47.7% |
| 3vm9A02 | 6.10.140.2110 | Special › Helix non-globular › Helix Hairpins › | 0.72 | 51.0 | 5.36e-01 | 81.5% | 84.2% |
| 1g8pA02 | 1.10.8.80 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Magnesium chelatase subunit I, C-Terminal domain | 0.72 | 52.0 | 4.90e-01 | 100.0% | 64.1% |
| 7egfc01 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.71 | 55.0 | 5.04e-01 | 84.6% | 70.9% |
| 4wv4B00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.71 | 53.0 | 4.82e-01 | 83.1% | 63.4% |
| 6fakA02 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.70 | 47.0 | 4.43e-01 | 72.3% | 56.8% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.70 | 41.0 | 4.35e-01 | 70.8% | 65.5% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 48.0 | 4.83e-01 | 76.9% | 72.3% |
| 7lv8A01 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.67 | 50.0 | 4.59e-01 | 78.5% | 77.4% |
| 2gscC00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.66 | 54.0 | 4.51e-01 | 89.2% | 80.9% |
| 1a7wA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.64 | 49.0 | 4.89e-01 | 87.7% | 80.9% |
| 1q9cA01 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.64 | 53.0 | 4.13e-01 | 93.8% | 88.4% |
| 7wboA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.63 | 45.0 | 3.36e-01 | 84.6% | 27.8% |
| 1ij5A03 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.63 | 55.0 | 4.40e-01 | 98.5% | 90.8% |
| 2p3yA02 | 1.10.3360.10 | Mainly Alpha › Orthogonal Bundle › VPA0735-like fold › VPA0735-like domain | 0.61 | 43.0 | 3.71e-01 | 75.4% | 81.3% |
| 5y27A00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.61 | 51.0 | 4.46e-01 | 92.3% | 61.2% |
| 1jfiB00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.60 | 50.0 | 3.93e-01 | 92.3% | 43.7% |
| 2daxA01 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.60 | 41.0 | 3.30e-01 | 98.5% | 34.0% |
| 1f45B00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.59 | 51.0 | 4.04e-01 | 95.4% | 72.9% |
| 4csrA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.59 | 52.0 | 4.69e-01 | 96.9% | 89.8% |
| 2aj6A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 40.0 | 3.34e-01 | 90.8% | 40.0% |
| 3ff5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 36.0 | 3.89e-01 | 100.0% | 81.5% |
| 3d8pB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 41.0 | 3.06e-01 | 86.2% | 81.2% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4134210 | 148.1.3.213 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_bind | 0.92 | 63.0 | 6.16e-01 | 70.8% | 78.6% |
| 3843288 | 2004.1.1.296 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM_bind | 0.92 | 69.0 | 6.52e-01 | 78.5% | 80.0% |
| 3494358 | 148.1.3.213 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_bind | 0.91 | 64.0 | 6.11e-01 | 73.8% | 76.0% |
| 3596205 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.88 | 67.0 | 5.79e-01 | 80.0% | 67.4% |
| 4963148 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.85 | 68.0 | 6.07e-01 | 86.2% | 66.7% |
| 4024278 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.84 | 60.0 | 5.14e-01 | 73.8% | 69.5% |
| 3802534 | 148.1.1.12 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Bromo_TP | 0.83 | 58.0 | 4.55e-01 | 72.3% | 52.8% |
| 3627865 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.83 | 60.0 | 5.68e-01 | 75.4% | 68.0% |
| 5029473 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.82 | 59.0 | 4.97e-01 | 75.4% | 65.7% |
| 3632182 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.82 | 58.0 | 5.30e-01 | 73.8% | 92.8% |
| 5060040 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.82 | 60.0 | 5.02e-01 | 78.5% | 59.1% |
| 4939645 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.82 | 56.0 | 4.67e-01 | 70.8% | 44.8% |
| 5061244 | 148.1.3.50 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Cdc6_lid | 0.81 | 57.0 | 5.33e-01 | 73.8% | 65.0% |
| 3476276 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.81 | 59.0 | 5.20e-01 | 75.4% | 85.6% |
| 3718449 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.81 | 62.0 | 5.24e-01 | 81.5% | 68.6% |
| 5026333 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.81 | 64.0 | 5.24e-01 | 84.6% | 66.1% |
| 4667812 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.81 | 62.0 | 5.07e-01 | 81.5% | 57.4% |
| 3585782 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.80 | 60.0 | 5.16e-01 | 80.0% | 66.0% |
| 4595180 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.79 | 59.0 | 5.37e-01 | 81.5% | 60.0% |
| 3488220 | 148.1.1.6 ↗ | alpha arrays › Histone-like › Histone-related › Histone › TFIID-31kDa | 0.79 | 55.0 | 4.55e-01 | 72.3% | 44.5% |
| 4374130 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.79 | 60.0 | 5.41e-01 | 80.0% | 62.4% |
| 3512447 | 148.1.1.6 ↗ | alpha arrays › Histone-like › Histone-related › Histone › TFIID-31kDa | 0.77 | 58.0 | 4.76e-01 | 78.5% | 49.1% |
| 3740452 | 148.1.1.4 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF | 0.77 | 53.0 | 5.06e-01 | 90.8% | 63.0% |
| 4134768 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.76 | 55.0 | 5.36e-01 | 75.4% | 70.0% |
| 3877792 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.76 | 58.0 | 5.36e-01 | 80.0% | 82.5% |
| 3557533 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.75 | 63.0 | 5.61e-01 | 90.8% | 85.6% |
| 3836893 | 148.1.1.12 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Bromo_TP | 0.73 | 54.0 | 5.07e-01 | 80.0% | 71.2% |
| 3510655 | 148.1.1.12 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Bromo_TP | 0.72 | 53.0 | 4.97e-01 | 78.5% | 70.0% |
| 3744257 | 2.1.1.228 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_bind | 0.72 | 55.0 | 5.14e-01 | 92.3% | 66.3% |
| 5013995 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.71 | 64.0 | 5.82e-01 | 96.9% | 87.1% |
| 3993813 | 148.1.1.9 ↗ | alpha arrays › Histone-like › Histone-related › Histone › TFIID_20kDa | 0.71 | 55.0 | 4.83e-01 | 83.1% | 67.4% |
| 3753429 | 148.1.1.1 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Histone | 0.71 | 55.0 | 4.89e-01 | 84.6% | 70.2% |
| 3268504 | 148.1.1.12 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Bromo_TP | 0.71 | 51.0 | 4.86e-01 | 78.5% | 70.0% |
| 3738650 | 148.1.1.12 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Bromo_TP | 0.70 | 56.0 | 4.87e-01 | 87.7% | 59.0% |
| 3933962 | 148.1.1.12 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Bromo_TP | 0.70 | 52.0 | 4.93e-01 | 81.5% | 71.2% |
| 3621689 | 148.1.1.12 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Bromo_TP | 0.69 | 54.0 | 5.09e-01 | 86.2% | 72.5% |
| 4934144 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.69 | 65.0 | 5.98e-01 | 100.0% | 90.0% |
| 4483086 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.69 | 61.0 | 5.37e-01 | 100.0% | 66.3% |
| 2843119 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.69 | 54.0 | 4.76e-01 | 83.1% | 65.2% |
| 3098681 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.69 | 54.0 | 4.82e-01 | 86.2% | 70.2% |
| 4040236 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.69 | 61.0 | 5.62e-01 | 93.8% | 87.5% |
| 3239426 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.69 | 53.0 | 4.86e-01 | 83.1% | 67.1% |
| 4964233 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.66 | 51.0 | 4.85e-01 | 86.2% | 76.2% |
| 4882043 | 148.1.3.18 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TIP49_C | 0.66 | 50.0 | 5.56e-01 | 81.5% | 100.0% |
| 4142118 | 148.1.1.4 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF | 0.65 | 51.0 | 4.11e-01 | 84.6% | 57.6% |
| 3927300 | 148.1.1.4 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF | 0.65 | 53.0 | 4.46e-01 | 89.2% | 57.3% |
| 3188072 | 148.1.1.5 ↗ | alpha arrays › Histone-like › Histone-related › Histone › TFIID-18kDa | 0.65 | 52.0 | 4.54e-01 | 89.2% | 61.0% |
| 3647944 | 148.1.1.4 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF | 0.64 | 50.0 | 4.35e-01 | 87.7% | 58.1% |
| 4178971 | 148.1.1.1 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Histone | 0.64 | 52.0 | 4.21e-01 | 87.7% | 57.5% |
| 3060102 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.64 | 50.0 | 4.17e-01 | 89.2% | 47.5% |
| 3507111 | 148.1.1.15 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CENP-X | 0.63 | 50.0 | 4.82e-01 | 87.7% | 81.3% |
| 3905241 | 148.1.1.4 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF | 0.62 | 50.0 | 4.52e-01 | 90.8% | 65.6% |
| 3960347 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.61 | 54.0 | 4.76e-01 | 93.8% | 74.4% |
| 4049272 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.61 | 51.0 | 4.01e-01 | 92.3% | 58.6% |
| 3396806 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 53.0 | 4.79e-01 | 100.0% | 70.0% |
| 3446393 | 148.1.1.4 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF | 0.61 | 50.0 | 4.37e-01 | 90.8% | 59.0% |
| 3846228 | 148.1.1.4 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF | 0.61 | 49.0 | 4.48e-01 | 90.8% | 67.8% |
| 3736214 | 148.1.1.4 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF | 0.61 | 51.0 | 4.17e-01 | 92.3% | 50.0% |
| 4486875 | 148.1.1.4 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF | 0.60 | 47.0 | 4.02e-01 | 89.2% | 52.2% |
| 3205813 | 148.1.1.5 ↗ | alpha arrays › Histone-like › Histone-related › Histone › TFIID-18kDa | 0.59 | 50.0 | 4.32e-01 | 92.3% | 67.0% |
| 3737033 | 148.1.1.4 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF | 0.59 | 52.0 | 4.16e-01 | 96.9% | 84.0% |
| 3934266 | 148.1.1.1 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Histone | 0.59 | 50.0 | 4.80e-01 | 92.3% | 82.7% |
| 3508619 | 148.1.1.1 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Histone | 0.58 | 48.0 | 3.69e-01 | 92.3% | 41.3% |