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rifcsplowo2_12_scaffold_23_prodigal-single.1__X__X__00077

Bact-Vir

rifcsplowo2_12_scaffold_23_prodigal-single.1__X__X__00077

Identity

Kingdom:
phage

Quality

81.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-66
PDB
CATH (89)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zpvA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.75 54.0 4.97e-01 100.0% 58.8%
2nyiA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.74 54.0 4.98e-01 100.0% 61.7%
2ca9A02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.74 56.0 4.98e-01 100.0% 58.4%
1u8sA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.73 52.0 4.80e-01 100.0% 58.1%
3tm4A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.72 48.0 3.45e-01 100.0% 25.1%
1sc6A03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.72 52.0 4.83e-01 100.0% 61.0%
5is2A01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.72 52.0 4.64e-01 100.0% 54.9%
3ibwA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.72 52.0 4.87e-01 100.0% 63.3%
2nwuB01 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.70 53.0 4.21e-01 100.0% 41.3%
3gnlA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.69 47.0 3.45e-01 100.0% 27.3%
3axsA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.69 61.0 3.89e-01 100.0% 23.6%
4llfD02 2.60.40.4030 Mainly Beta › Sandwich › Immunoglobulin-like › 0.69 47.0 3.83e-01 100.0% 38.3%
5yppA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.68 52.0 4.63e-01 100.0% 58.9%
2m9kA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.67 50.0 4.47e-01 100.0% 55.9%
5optY00 3.30.70.3370 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 55.0 4.55e-01 100.0% 49.6%
3tupA02 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.67 52.0 4.61e-01 100.0% 58.3%
4qdjA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 49.0 3.37e-01 100.0% 24.5%
2lqjA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.66 50.0 4.47e-01 100.0% 57.4%
2b4vA03 3.30.70.1970 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 50.0 4.35e-01 100.0% 53.5%
2f06A00 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.66 46.0 3.63e-01 98.5% 34.0%
5heeA00 3.40.830.10 Alpha Beta › 3-Layer(aba) Sandwich › Protocatechuate 4,5-dioxygenase; Chain B › LigB-like 0.64 56.0 3.77e-01 100.0% 98.9%
3d3bJ00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.64 49.0 4.51e-01 100.0% 63.2%
1r89A03 3.30.70.590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Poly(A) polymerase predicted RNA binding domain 0.64 52.0 4.21e-01 100.0% 45.5%
3wraA01 3.40.830.10 Alpha Beta › 3-Layer(aba) Sandwich › Protocatechuate 4,5-dioxygenase; Chain B › LigB-like 0.63 54.0 3.57e-01 100.0% 89.8%
1y0hB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 50.0 4.39e-01 100.0% 59.2%
2efjA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 49.0 3.37e-01 100.0% 26.2%
1ygyA04 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.61 43.0 4.19e-01 100.0% 65.8%
2qswA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.61 43.0 3.94e-01 100.0% 55.6%
2qrrA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.60 43.0 3.84e-01 100.0% 51.5%
1vm0A00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.60 46.0 4.11e-01 100.0% 58.1%
2dbbA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.60 42.0 3.81e-01 100.0% 52.7%
2qmxA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.60 41.0 3.80e-01 100.0% 53.3%
1tuwA00 3.30.70.1090 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel. 0.60 47.0 4.03e-01 98.5% 52.8%
3i4hX02 3.30.70.1900 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 53.0 4.56e-01 100.0% 68.3%
4ha7B00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.60 43.0 3.05e-01 100.0% 24.4%
6hhnA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 48.0 4.35e-01 98.5% 65.2%
4djbA00 3.30.70.2870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 0.58 51.0 4.24e-01 100.0% 56.8%
3b5iB01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 48.0 3.26e-01 100.0% 24.5%
3bzmA00 3.60.120.10 Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase 0.58 49.0 3.04e-01 100.0% 18.6%
3fvcA03 2.30.29.100 Mainly Beta › Roll › PH-domain like › 0.58 48.0 4.14e-01 96.9% 95.5%
2rsvA00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.58 50.0 3.12e-01 100.0% 29.3%
4lubB01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.57 44.0 3.91e-01 100.0% 56.0%
1blxA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 49.0 4.41e-01 100.0% 67.4%
3hyiA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.57 41.0 2.96e-01 96.9% 25.7%
2b25A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 41.0 3.02e-01 100.0% 27.5%
1i9zA00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.57 49.0 3.15e-01 100.0% 19.0%
4wsqB00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.57 47.0 3.04e-01 100.0% 19.4%
2obdA01 3.15.20.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 2 › Bactericidal permeability-increasing protein; domain 2 0.57 49.0 3.25e-01 96.9% 72.4%
5ixuA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 48.0 4.12e-01 98.5% 59.8%
6ue9L02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 43.0 3.56e-01 100.0% 45.1%
7dl8C01 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.56 45.0 4.13e-01 100.0% 65.2%
2x7gA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 41.0 3.79e-01 100.0% 59.1%
3fncB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 41.0 3.12e-01 78.5% 90.1%
3dp7A03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 40.0 3.10e-01 100.0% 31.7%
5c3vA01 3.30.800.10 Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol Phosphate Kinase II Beta › Phosphatidylinositol Phosphate Kinase II Beta 0.55 39.0 2.91e-01 73.8% 40.1%
3mr7A00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.55 45.0 3.31e-01 90.8% 93.6%
3keyA02 3.30.1370.230 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain 0.55 49.0 4.38e-01 96.9% 76.1%
4rv9A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 48.0 3.44e-01 100.0% 34.3%
1lq9A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 48.0 4.00e-01 100.0% 56.2%
4feuF01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 39.0 3.78e-01 98.5% 67.1%
4c2mA09 3.30.70.2850 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 43.0 3.19e-01 86.2% 75.9%
3f62A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 47.0 4.00e-01 100.0% 58.3%
2onlC01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 42.0 3.85e-01 98.5% 64.0%
3merA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 45.0 3.35e-01 100.0% 35.3%
1dj0A01 3.30.70.660 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain 0.54 46.0 3.71e-01 100.0% 61.6%
6fucA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 39.0 3.62e-01 95.4% 59.3%
5k9fA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 42.0 3.71e-01 98.5% 56.3%
5w7tA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 42.0 3.78e-01 98.5% 58.8%
4ndhB00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.54 43.0 3.33e-01 96.9% 39.3%
2g3aA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 44.0 3.79e-01 90.8% 75.2%
5xoyB02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 47.0 4.00e-01 100.0% 72.0%
4clfA02 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.53 41.0 3.15e-01 100.0% 32.1%
4za1C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 41.0 3.77e-01 100.0% 62.0%
3uebF00 3.30.300.100 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like 0.53 45.0 3.99e-01 100.0% 76.0%
1iujA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 43.0 3.79e-01 98.5% 59.8%
5i2cB01 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.53 39.0 3.05e-01 98.5% 35.6%
1zbtA02 3.30.70.1660 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 42.0 3.26e-01 100.0% 36.8%
3bguA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 44.0 3.95e-01 98.5% 67.7%
4q7aC02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 44.0 3.83e-01 100.0% 69.4%
2lu1A00 3.30.70.2370 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 45.0 4.09e-01 98.5% 73.0%
2vzyC00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 43.0 3.16e-01 95.4% 46.0%
2jgbA01 3.30.760.10 Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e 0.52 44.0 3.25e-01 100.0% 35.8%
2pd1A01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 41.0 3.70e-01 100.0% 62.1%
1mruA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 40.0 3.71e-01 100.0% 65.2%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.51 41.0 3.94e-01 100.0% 76.0%
2cy2A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 44.0 3.26e-01 96.9% 50.0%
3n5fA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 43.0 3.69e-01 100.0% 65.8%
3bdeB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 42.0 3.79e-01 100.0% 65.7%
1ie0A00 3.30.1360.80 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › S-ribosylhomocysteinase (LuxS) 0.51 43.0 3.30e-01 100.0% 40.4%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3959682 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.81 59.0 5.66e-01 100.0% 66.7%
3312923 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.77 57.0 4.99e-01 100.0% 53.7%
3643150 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.77 57.0 5.19e-01 100.0% 60.0%
3810458 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.77 57.0 4.97e-01 100.0% 53.7%
3833178 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.76 57.0 5.34e-01 100.0% 65.0%
3439107 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.75 55.0 5.25e-01 100.0% 66.7%
3824912 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.75 55.0 5.11e-01 100.0% 62.5%
4955435 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.75 55.0 5.21e-01 100.0% 66.7%
3315331 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.75 54.0 5.06e-01 100.0% 62.5%
3383879 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.74 55.0 5.23e-01 100.0% 68.0%
3333863 304.8.1.47 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR9_3rd 0.74 54.0 4.53e-01 100.0% 45.5%
3667551 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.74 53.0 4.74e-01 98.5% 54.4%
3641084 387.1.5.31 few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › PF29352 0.74 55.0 5.93e-01 100.0% 98.1%
3942499 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.74 53.0 5.18e-01 98.5% 70.0%
3829359 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.72 62.0 5.64e-01 100.0% 71.8%
136544 304.8.1.8 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 0.72 52.0 4.89e-01 100.0% 62.5%
3815383 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.72 53.0 4.89e-01 100.0% 61.2%
4291325 306.9.1.1 a+b two layers › Glucose permease domain IIB-like › MecA substrate binding domain › MecA substrate binding domain › MecA 0.71 61.0 5.79e-01 98.5% 90.0%
3468691 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.71 56.0 5.07e-01 100.0% 62.9%
4201044 304.109.1.10 a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › PF27137 0.71 62.0 5.06e-01 100.0% 53.3%
3364258 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.70 52.0 4.73e-01 100.0% 59.1%
3704046 304.55.2.0 a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like 0.69 60.0 5.31e-01 100.0% 67.4%
4376479 2003.1.5.25 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB 0.68 47.0 3.37e-01 100.0% 25.4%
4928824 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.68 54.0 4.75e-01 100.0% 58.9%
3588078 872.3.1.0 a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like 0.67 58.0 5.29e-01 100.0% 82.2%
3301920 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.67 46.0 3.25e-01 100.0% 22.9%
3719272 872.3.1.5 a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 0.66 56.0 5.56e-01 100.0% 90.0%
3932127 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.66 53.0 4.62e-01 100.0% 56.2%
5032056 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.66 52.0 4.43e-01 100.0% 53.4%
3683288 256.1.1.0 a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like 0.66 53.0 5.45e-01 100.0% 95.0%
5052336 304.4.1.75 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › GYD 0.66 52.0 4.60e-01 100.0% 58.9%
4371656 304.8.1.5 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.66 48.0 4.20e-01 100.0% 52.6%
3639208 331.10.1.1 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox 0.65 51.0 3.15e-01 100.0% 15.0%
5067611 304.20.1.4 a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C 0.65 53.0 3.89e-01 100.0% 32.3%
3964094 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.64 54.0 4.25e-01 98.5% 44.0%
357856 304.8.1.21 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 0.64 48.0 4.37e-01 100.0% 60.2%
3499425 304.18.1.1 a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB 0.64 55.0 4.72e-01 100.0% 66.1%
5000353 304.20.1.4 a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C 0.64 53.0 4.25e-01 98.5% 46.2%
3449841 310.3.1.14 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › DUF7049 0.63 55.0 4.86e-01 100.0% 67.0%
5024461 304.28.1.38 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › CAA_C 0.63 52.0 3.92e-01 100.0% 36.4%
4027295 872.3.1.5 a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 0.63 54.0 4.93e-01 100.0% 76.7%
4034116 886.1.1.3 a+b duplicates or obligate multimers › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › Cass2 0.63 56.0 4.17e-01 96.9% 80.0%
5030445 304.20.1.4 a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C 0.63 52.0 4.08e-01 100.0% 42.1%
5065348 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.63 41.0 3.10e-01 100.0% 25.9%
4933323 304.20.1.4 a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C 0.62 52.0 3.74e-01 100.0% 31.3%
3186440 872.1.1.0 a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like 0.62 51.0 5.19e-01 96.9% 100.0%
3604109 304.20.1.4 a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C 0.62 50.0 3.82e-01 98.5% 36.6%
5042067 304.4.1.84 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › CAA_C 0.62 50.0 3.71e-01 100.0% 32.1%
4986560 304.20.1.4 a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C 0.62 50.0 3.75e-01 100.0% 33.9%
3626480 331.10.1.1 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox 0.62 46.0 3.00e-01 100.0% 17.1%
4928347 304.48.1.4 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc 0.61 42.0 3.02e-01 70.8% 42.7%
4514959 304.20.1.4 a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C 0.61 50.0 3.69e-01 100.0% 33.2%
4619396 2003.1.5.25 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB 0.61 43.0 2.99e-01 100.0% 20.9%
3495236 328.1.1.0 a+b two layers › IF3-like › AlbA-like › AlbA-like 0.61 52.0 4.70e-01 100.0% 68.9%
5028094 304.20.1.4 a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C 0.61 51.0 3.73e-01 98.5% 33.5%
3415186 331.10.1.1 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox 0.61 46.0 2.96e-01 100.0% 16.1%
5046881 328.8.1.0 a+b two layers › IF3-like › Schlafen 8 › Schlafen 8 0.61 55.0 4.56e-01 100.0% 59.1%
3981520 872.3.1.4 a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › DUF4156 0.60 54.0 4.81e-01 100.0% 79.8%
3750557 304.47.1.0 a+b two layers › Alpha-beta plaits › SEA domain › SEA domain 0.60 53.0 4.43e-01 100.0% 58.3%
3701535 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.60 52.0 4.71e-01 98.5% 71.1%
3482573 872.3.1.0 a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like 0.60 51.0 4.68e-01 100.0% 76.7%
3615945 304.18.1.1 a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB 0.60 50.0 4.50e-01 100.0% 67.0%
5010660 304.28.1.38 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › CAA_C 0.59 49.0 3.76e-01 98.5% 39.4%
5036011 304.28.1.38 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › CAA_C 0.59 48.0 3.58e-01 100.0% 32.6%
5026545 304.20.1.4 a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C 0.59 48.0 3.58e-01 100.0% 33.3%
3971851 206.1.1.17 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Kdo 0.58 50.0 3.45e-01 100.0% 45.8%
3726058 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.58 50.0 3.18e-01 100.0% 41.6%
4355727 304.9.1.71 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › SNU71_RBD 0.58 51.0 4.00e-01 100.0% 51.4%
5032300 304.20.1.4 a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C 0.58 47.0 3.47e-01 100.0% 31.8%
3304087 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.57 50.0 3.12e-01 100.0% 31.4%
4998157 873.1.1.4 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › TRAPP 0.57 46.0 3.57e-01 98.5% 44.0%
4054638 304.20.1.4 a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C 0.57 44.0 3.44e-01 100.0% 35.3%
3734507 331.10.1.1 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox 0.57 50.0 3.11e-01 100.0% 18.2%
4265803 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.56 49.0 3.97e-01 98.5% 53.1%
5066718 304.20.1.4 a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C 0.56 45.0 3.41e-01 100.0% 32.4%
4943031 304.28.1.38 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › CAA_C 0.56 47.0 3.46e-01 100.0% 31.9%
3991153 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.56 46.0 3.02e-01 100.0% 21.1%
5072976 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.55 48.0 3.42e-01 100.0% 32.8%
5058023 304.48.1.0 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.55 42.0 3.07e-01 83.1% 73.0%
4930192 304.20.1.4 a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C 0.54 45.0 3.39e-01 100.0% 34.3%
5037866 304.20.1.4 a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C 0.54 42.0 3.22e-01 98.5% 32.1%
3588477 304.31.1.1 a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase › HMG-CoA_red 0.54 46.0 3.97e-01 100.0% 64.5%
4933757 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.54 46.0 3.75e-01 100.0% 55.4%
4958411 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.53 45.0 3.83e-01 100.0% 57.3%
4072994 304.20.1.4 a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C 0.52 41.0 3.29e-01 100.0% 39.4%
4014188 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.51 43.0 2.73e-01 93.8% 60.8%
4958412 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.51 43.0 3.61e-01 100.0% 53.6%
3491970 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.51 42.0 2.75e-01 98.5% 18.8%