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rifcsplowo2_12_scaffold_23_prodigal-single.1__X__X__00099
Bact-Virrifcsplowo2_12_scaffold_23_prodigal-single.1__X__X__00099
Identity
- Kingdom:
- phage
Quality
92.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 43-110
Domain cluster:
rep: CAKLQF020000011.1__CAH1085983.1__SAMEA5780031_02231__00031__D106-155
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5c8qB02 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.81 | 53.0 | 6.23e-01 | 73.5% | 100.0% |
| 2djpA00 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.79 | 61.0 | 5.82e-01 | 85.3% | 71.4% |
| 4b8vA03 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.79 | 54.0 | 6.19e-01 | 76.5% | 100.0% |
| 4b8vA01 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.75 | 59.0 | 5.94e-01 | 88.2% | 85.1% |
| 4b8vA02 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.75 | 55.0 | 5.43e-01 | 80.9% | 72.6% |
| 2mtzA01 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.74 | 52.0 | 5.79e-01 | 86.8% | 100.0% |
| 1e0gA00 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.74 | 50.0 | 5.67e-01 | 79.4% | 100.0% |
| 2gu1A01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 51.0 | 4.73e-01 | 88.2% | 92.0% |
| 6dx5A00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.61 | 42.0 | 3.15e-01 | 72.1% | 66.9% |
| 3sluB01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 48.0 | 4.42e-01 | 92.6% | 89.0% |
| 1kkhA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.54 | 43.0 | 3.51e-01 | 89.7% | 83.2% |
| 2y8yA01 | 3.30.70.1200 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 1 | 0.53 | 40.0 | 3.77e-01 | 82.4% | 70.9% |
| 7pzaA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 38.0 | 3.64e-01 | 79.4% | 93.0% |
| 6tmfL00 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.51 | 42.0 | 3.54e-01 | 97.1% | 50.8% |
| 1vigA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.51 | 38.0 | 3.77e-01 | 86.8% | 77.5% |
| 1ywqA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.51 | 44.0 | 3.23e-01 | 100.0% | 49.2% |
| 2fmyA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 37.0 | 3.60e-01 | 82.4% | 98.8% |
ECOD (82)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5004560 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.88 | 68.0 | 7.50e-01 | 82.4% | 100.0% |
| 4995817 | 101.15.1.4 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_gp53 | 0.84 | 70.0 | 6.97e-01 | 89.7% | 91.4% |
| 3979943 | 101.15.1.3 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_tail_X | 0.83 | 59.0 | 6.80e-01 | 73.5% | 100.0% |
| 3587382 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 64.0 | 6.96e-01 | 82.4% | 100.0% |
| 3349612 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.82 | 58.0 | 6.57e-01 | 80.9% | 100.0% |
| 4177991 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.82 | 62.0 | 6.81e-01 | 82.4% | 100.0% |
| 4128043 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.81 | 52.0 | 6.22e-01 | 70.6% | 100.0% |
| 3337080 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.81 | 63.0 | 6.69e-01 | 86.8% | 93.3% |
| 3232962 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.81 | 61.0 | 6.49e-01 | 83.8% | 90.0% |
| 2895417 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.81 | 63.0 | 6.04e-01 | 82.4% | 74.0% |
| 3925474 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.81 | 57.0 | 6.42e-01 | 77.9% | 100.0% |
| 3413453 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.81 | 57.0 | 6.46e-01 | 77.9% | 100.0% |
| 3413357 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.80 | 61.0 | 6.07e-01 | 86.8% | 78.6% |
| 3452845 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.80 | 59.0 | 6.49e-01 | 85.3% | 96.4% |
| 3501971 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.80 | 57.0 | 6.01e-01 | 80.9% | 85.0% |
| 3517460 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.80 | 60.0 | 6.52e-01 | 86.8% | 98.2% |
| 4404011 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.80 | 61.0 | 6.10e-01 | 91.2% | 80.0% |
| 3846469 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.80 | 60.0 | 5.41e-01 | 83.8% | 60.0% |
| 162111 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.79 | 61.0 | 5.82e-01 | 85.3% | 71.4% |
| 4492966 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.79 | 58.0 | 6.35e-01 | 85.3% | 96.4% |
| 2809236 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.78 | 59.0 | 6.16e-01 | 80.9% | 90.3% |
| 1758716 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.78 | 56.0 | 6.21e-01 | 79.4% | 98.1% |
| 3970261 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.78 | 58.0 | 6.37e-01 | 77.9% | 100.0% |
| 2124917 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.78 | 63.0 | 4.69e-01 | 86.8% | 37.3% |
| 4468802 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.77 | 57.0 | 5.43e-01 | 82.4% | 67.1% |
| 4176074 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.77 | 59.0 | 6.18e-01 | 80.9% | 98.3% |
| 3464064 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.77 | 64.0 | 5.87e-01 | 88.2% | 72.9% |
| 4491522 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.77 | 58.0 | 6.11e-01 | 86.8% | 90.0% |
| 3417561 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.77 | 65.0 | 4.17e-01 | 91.2% | 64.7% |
| 3338947 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.77 | 57.0 | 5.88e-01 | 82.4% | 83.1% |
| 3974521 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.77 | 59.0 | 6.26e-01 | 86.8% | 93.3% |
| 3426433 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.76 | 63.0 | 6.64e-01 | 89.7% | 100.0% |
| 3898121 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.76 | 56.0 | 6.15e-01 | 88.2% | 96.4% |
| 3355077 | 101.15.1.13 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK | 0.76 | 57.0 | 6.23e-01 | 82.4% | 98.2% |
| 3250125 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.76 | 58.0 | 5.94e-01 | 85.3% | 84.6% |
| 3655928 | 101.15.1.13 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK | 0.76 | 59.0 | 5.13e-01 | 82.4% | 56.0% |
| 3457416 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.76 | 62.0 | 6.52e-01 | 89.7% | 98.3% |
| 3821115 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.76 | 63.0 | 5.81e-01 | 89.7% | 75.3% |
| 3964920 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.76 | 55.0 | 5.81e-01 | 83.8% | 89.7% |
| 3320955 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.75 | 63.0 | 6.41e-01 | 89.7% | 96.9% |
| 3981327 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.75 | 56.0 | 6.12e-01 | 77.9% | 98.1% |
| 3666767 | 101.15.1.10 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP | 0.75 | 59.0 | 5.05e-01 | 83.8% | 61.9% |
| 3671032 | 101.15.1.11 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_NFP | 0.75 | 62.0 | 4.63e-01 | 89.7% | 39.4% |
| 3655335 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.75 | 62.0 | 4.57e-01 | 88.2% | 37.0% |
| 3195570 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.75 | 56.0 | 5.71e-01 | 86.8% | 83.1% |
| 3381619 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.75 | 63.0 | 4.07e-01 | 91.2% | 65.2% |
| 4023232 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.75 | 55.0 | 5.80e-01 | 83.8% | 88.3% |
| 3641672 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.75 | 62.0 | 6.00e-01 | 89.7% | 81.3% |
| 2543722 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.75 | 65.0 | 6.22e-01 | 95.6% | 83.5% |
| 3802645 | 101.15.1.6 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_CERK1_LYK3_4_5 | 0.74 | 62.0 | 6.32e-01 | 89.7% | 93.8% |
| 2124918 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.74 | 63.0 | 4.99e-01 | 92.6% | 93.4% |
| 3375189 | 101.15.1.10 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP | 0.74 | 61.0 | 6.12e-01 | 89.7% | 97.1% |
| 3359799 | 101.15.1.10 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP | 0.74 | 63.0 | 5.01e-01 | 92.6% | 48.9% |
| 3166029 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.74 | 55.0 | 5.92e-01 | 79.4% | 98.2% |
| 3337328 | 101.15.1.14 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM, LysM2_CERK1_LYK3_4_5 | 0.74 | 62.0 | 4.04e-01 | 91.2% | 22.5% |
| 3365578 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.74 | 62.0 | 5.87e-01 | 91.2% | 86.3% |
| 3670445 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.73 | 63.0 | 4.01e-01 | 92.6% | 21.3% |
| 3349597 | 101.15.1.13 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK | 0.73 | 55.0 | 5.82e-01 | 80.9% | 95.0% |
| None | — | 0.73 | 61.0 | 4.97e-01 | 91.2% | 100.0% | |
| 4019244 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.73 | 56.0 | 5.76e-01 | 91.2% | 87.7% |
| 3367888 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.73 | 60.0 | 6.00e-01 | 89.7% | 95.7% |
| 3421939 | 101.15.1.9 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 | 0.72 | 58.0 | 4.72e-01 | 86.8% | 48.8% |
| 3651054 | 101.15.1.10 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP | 0.72 | 60.0 | 4.58e-01 | 91.2% | 44.5% |
| 4069716 | 101.15.1.14 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM, LysM2_CERK1_LYK3_4_5 | 0.72 | 60.0 | 4.96e-01 | 92.6% | 51.7% |
| 3691758 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.72 | 54.0 | 5.84e-01 | 80.9% | 98.2% |
| 3305689 | 101.15.1.9 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 | 0.71 | 58.0 | 4.61e-01 | 89.7% | 87.9% |
| 3643631 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.71 | 56.0 | 5.77e-01 | 88.2% | 89.2% |
| 2968802 | 101.15.1.11 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_NFP | 0.71 | 59.0 | 4.69e-01 | 91.2% | 45.7% |
| 3811719 | 101.15.1.9 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 | 0.71 | 59.0 | 4.56e-01 | 91.2% | 45.3% |
| 3654744 | 101.15.1.10 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP | 0.71 | 54.0 | 5.05e-01 | 88.2% | 65.9% |
| 3303205 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.71 | 55.0 | 5.78e-01 | 83.8% | 96.7% |
| 3819870 | 101.15.1.6 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_CERK1_LYK3_4_5 | 0.70 | 59.0 | 4.72e-01 | 92.6% | 93.3% |
| 4180515 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.70 | 51.0 | 5.57e-01 | 80.9% | 100.0% |
| 3963519 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.70 | 55.0 | 5.61e-01 | 85.3% | 92.3% |
| 3989756 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.69 | 47.0 | 5.32e-01 | 70.6% | 100.0% |
| 4008890 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.66 | 49.0 | 5.28e-01 | 79.4% | 100.0% |
| 3269916 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.66 | 47.0 | 4.92e-01 | 75.0% | 85.0% |
| 3968457 | 101.15.1.2 ↗ | alpha arrays › HTH › LysM domain › LysM domain › OapA | 0.65 | 53.0 | 4.97e-01 | 89.7% | 95.3% |
| 3164516 | 101.15.1.2 ↗ | alpha arrays › HTH › LysM domain › LysM domain › OapA | 0.62 | 50.0 | 4.67e-01 | 91.2% | 87.1% |
| 3585157 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.59 | 42.0 | 4.32e-01 | 85.3% | 78.5% |
| 4100484 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.53 | 36.0 | 3.88e-01 | 73.5% | 98.2% |
| 3173840 | 327.11.2.76 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF29533 | 0.51 | 39.0 | 3.81e-01 | 83.8% | 80.0% |