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rifcsplowo2_12_scaffold_23_prodigal-single.1__X__X__00140
Bact-Virrifcsplowo2_12_scaffold_23_prodigal-single.1__X__X__00140
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-274
Domain cluster:
rep: IMGVR_UViG_3300000193_000010-3300000193-SI47jul10_135mDRAFT_100036826__D17-253
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4n68A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 23.0 | 3.55e-01 | 98.8% | 82.8% |
| 4wrnA03 | 2.60.40.4100 | Mainly Beta › Sandwich › Immunoglobulin-like › Zona pellucida, ZP-C domain | 0.60 | 34.0 | 4.05e-01 | 91.0% | 78.7% |
| 4kktA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.59 | 25.0 | 3.79e-01 | 96.1% | 93.3% |
| 2yeqA01 | 2.60.40.380 | Mainly Beta › Sandwich › Immunoglobulin-like › Purple acid phosphatase-like, N-terminal | 0.57 | 24.0 | 3.55e-01 | 97.6% | 87.2% |
| 4qi3A00 | 2.60.40.1210 | Mainly Beta › Sandwich › Immunoglobulin-like › Cellobiose dehydrogenase, cytochrome domain | 0.57 | 36.0 | 4.00e-01 | 92.9% | 77.3% |
| 3zsjA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 30.0 | 3.91e-01 | 98.4% | 91.3% |
| 1ja1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.56 | 28.0 | 3.88e-01 | 98.0% | 95.9% |
| 4yhbA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 29.0 | 3.88e-01 | 100.0% | 96.1% |
| 1ep3B01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.53 | 23.0 | 3.41e-01 | 98.8% | 97.0% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3901599 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 25.0 | 3.82e-01 | 100.0% | 81.0% |
| 3394906 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.59 | 25.0 | 3.62e-01 | 98.8% | 85.5% |
| 3223720 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.59 | 23.0 | 3.39e-01 | 98.8% | 81.0% |
| 3227297 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.55 | 27.0 | 3.74e-01 | 99.6% | 91.5% |
| 3421643 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.55 | 33.0 | 4.06e-01 | 99.6% | 94.8% |
| 4354423 | 11.1.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Zona_pellucida | 0.55 | 30.0 | 3.47e-01 | 83.9% | 71.4% |
| 4962172 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 33.0 | 3.92e-01 | 98.0% | 87.6% |
| 3236246 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.53 | 33.0 | 4.03e-01 | 99.6% | 96.9% |
| 3969817 | 1.1.7.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_9 | 0.53 | 28.0 | 3.73e-01 | 99.6% | 96.2% |
| 3781936 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.53 | 21.0 | 3.03e-01 | 84.7% | 77.4% |
| 4014463 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 29.0 | 3.61e-01 | 98.0% | 90.0% |
D2
high
residues 279-357
Domain cluster:
rep: 5H_04062016_scaffold_1_prodigal-single.1__X__X__00155__D177-242
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3wnoA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 44.0 | 4.08e-01 | 100.0% | 54.0% |
| 2zaiB03 | 2.60.40.3020 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 44.0 | 4.03e-01 | 100.0% | 52.3% |
| 3fn9A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 43.0 | 3.82e-01 | 100.0% | 49.2% |
| 3up6A01 | 2.60.40.2580 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 43.0 | 3.39e-01 | 100.0% | 36.7% |
| 3py9A04 | 2.60.40.2560 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 38.0 | 3.84e-01 | 100.0% | 66.7% |
| 3hqiA01 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.58 | 40.0 | 3.45e-01 | 97.5% | 43.1% |
| 8os3A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 38.0 | 3.72e-01 | 97.5% | 59.8% |
| 3o0lA00 | 2.60.40.3230 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 41.0 | 3.71e-01 | 98.7% | 56.0% |
| 8gpsA02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.55 | 35.0 | 3.21e-01 | 96.2% | 47.7% |
| 3kh8B01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 44.0 | 3.71e-01 | 100.0% | 63.6% |
| 5hdwA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.51 | 40.0 | 3.47e-01 | 100.0% | 52.7% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4989772 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.74 | 49.0 | 4.78e-01 | 97.5% | 62.4% |
| 3828450 | 11.1.1.51 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 | 0.65 | 45.0 | 3.42e-01 | 100.0% | 29.1% |
| 5022900 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 44.0 | 4.17e-01 | 100.0% | 60.0% |
| 4385045 | 11.1.1.987 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF30412 | 0.61 | 42.0 | 3.82e-01 | 100.0% | 51.8% |
| 4961062 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 45.0 | 3.99e-01 | 100.0% | 54.8% |
| 5005564 | 11.1.1.1424 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7490 | 0.60 | 42.0 | 3.97e-01 | 100.0% | 59.0% |
| 5055242 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 42.0 | 4.19e-01 | 96.2% | 73.8% |
| 3516143 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 46.0 | 4.12e-01 | 98.7% | 60.0% |
| 3448906 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 50.0 | 3.89e-01 | 100.0% | 45.9% |
| 3877405 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.56 | 39.0 | 3.63e-01 | 97.5% | 54.5% |
| 3826797 | 11.1.1.51 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 | 0.56 | 41.0 | 3.39e-01 | 100.0% | 41.2% |
| 5070398 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 48.0 | 3.88e-01 | 100.0% | 50.3% |
| 1870999 | 11.1.1.182 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3-like | 0.55 | 41.0 | 3.60e-01 | 100.0% | 52.0% |
| 5055307 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 41.0 | 3.49e-01 | 100.0% | 46.8% |
| 5061075 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 44.0 | 3.68e-01 | 100.0% | 49.7% |
| 3672602 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 43.0 | 4.32e-01 | 100.0% | 86.3% |
| 4509186 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.53 | 43.0 | 3.42e-01 | 91.1% | 94.1% |
| 3171619 | 11.1.1.643 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_POM152 | 0.51 | 36.0 | 3.53e-01 | 100.0% | 66.7% |
| 3761389 | 10.32.1.20 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FBA | 0.51 | 35.0 | 3.03e-01 | 94.9% | 44.6% |