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rifcsplowo2_12_scaffold_23_prodigal-single.1__X__X__00148
Bact-Virrifcsplowo2_12_scaffold_23_prodigal-single.1__X__X__00148
Identity
- Kingdom:
- phage
Quality
74.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 268-329
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2bvlA01 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 47.0 | 4.18e-01 | 96.8% | 57.0% |
| 4l9pA00 | 1.25.40.120 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Protein prenylyltransferase | 0.57 | 43.0 | 2.78e-01 | 85.5% | 22.4% |
D2
medium
residues 5-97_135-234
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zigA00 | 3.30.110.150 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein | 0.62 | 17.0 | 2.69e-01 | 71.0% | 56.1% |
D3
medium
residues 850-1001
D4
medium
residues 1026-1080
Domain cluster:
representative
D5
medium
residues 1081-1117_1607-1787_1800-1849
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3w6wB02 | 2.60.310.20 | Mainly Beta › Sandwich › Hemocyanin; Chain: A, domain 2 › | 0.67 | 29.0 | 4.05e-01 | 91.4% | 79.4% |
| 2vvdA00 | 2.60.120.720 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 32.0 | 4.02e-01 | 95.1% | 76.5% |
| 1l9nA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 26.0 | 3.86e-01 | 93.7% | 90.4% |
| 1xf1A03 | 2.60.40.1710 | Mainly Beta › Sandwich › Immunoglobulin-like › Subtilisin-like superfamily | 0.59 | 27.0 | 3.74e-01 | 94.4% | 85.5% |
| 1a8mA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 28.0 | 3.65e-01 | 94.8% | 79.6% |
| 3gldA01 | 2.60.40.3050 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 28.0 | 3.64e-01 | 89.2% | 83.2% |
| 2re9A01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 29.0 | 3.74e-01 | 95.5% | 83.4% |
| 4msvA01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 26.0 | 3.56e-01 | 96.3% | 87.6% |
| 1djxA03 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.53 | 28.0 | 3.82e-01 | 94.0% | 100.0% |
| 4ae2B02 | 2.60.120.1000 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 27.0 | 3.34e-01 | 96.3% | 77.5% |
| 2fpnA01 | 3.30.2030.10 | Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like | 0.51 | 27.0 | 3.66e-01 | 97.0% | 97.1% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3415432 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.60 | 28.0 | 3.84e-01 | 92.2% | 85.9% |
| 329362 | 10.3.1.1 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF | 0.57 | 30.0 | 3.72e-01 | 95.5% | 79.9% |
| 4629547 | 10.3.1.1 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF | 0.56 | 31.0 | 3.77e-01 | 96.3% | 82.1% |
| 3490217 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.54 | 30.0 | 3.77e-01 | 95.1% | 88.7% |
| 3244023 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.52 | 31.0 | 3.67e-01 | 95.1% | 83.9% |
| 3546952 | 11.2.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › MNNL | 0.52 | 30.0 | 3.93e-01 | 86.2% | 100.0% |
| 4029345 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.52 | 29.0 | 3.80e-01 | 94.0% | 97.9% |
| 3890583 | 11.2.1.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2-C2_1 | 0.51 | 29.0 | 3.64e-01 | 92.9% | 89.7% |
| 3740278 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.51 | 28.0 | 3.66e-01 | 92.9% | 97.2% |
| 3605363 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.50 | 27.0 | 3.55e-01 | 91.0% | 94.4% |
| 3736041 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.50 | 32.0 | 3.75e-01 | 91.8% | 88.9% |
D6
medium
residues 1118-1292_1360-1386
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6le1A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 16.0 | 2.78e-01 | 86.1% | 75.0% |
| 7yh1A01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.51 | 22.0 | 2.82e-01 | 84.7% | 65.8% |