←Back to structures
rifcsplowo2_12_scaffold_23_prodigal-single.1__X__X__00150
Bact-Virrifcsplowo2_12_scaffold_23_prodigal-single.1__X__X__00150
Identity
- Kingdom:
- phage
Quality
79.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 43-104
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xppA00 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.59 | 42.0 | 3.29e-01 | 75.8% | 46.7% |
| 4l7mA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.57 | 40.0 | 2.72e-01 | 77.4% | 35.6% |
| 3f0cA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.55 | 37.0 | 4.04e-01 | 71.0% | 100.0% |
| 4ptsB02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 43.0 | 3.22e-01 | 91.9% | 42.4% |
| 1xdsB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 38.0 | 3.48e-01 | 87.1% | 73.9% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3410723 | 101.1.17.3 ↗ | alpha arrays › HTH › HTH › FF domain › RhoGAP-FF1 | 0.61 | 43.0 | 4.31e-01 | 75.8% | 92.3% |
| 4183514 | 2004.1.1.412 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AddB_5th | 0.58 | 47.0 | 2.86e-01 | 91.9% | 40.0% |
| 3618577 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.57 | 39.0 | 2.56e-01 | 71.0% | 24.3% |
| 4321877 | 101.1.1.311 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TYA | 0.55 | 40.0 | 3.72e-01 | 80.6% | 95.2% |
| 1180661 | 304.37.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sulfite reductase, domains 1 and 3 › Sulfite reductase, domains 1 and 3 › NIR_SIR_ferr | 0.53 | 46.0 | 3.40e-01 | 100.0% | 61.7% |
| 3170253 | 632.3.1.11 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain › SUV3_C | 0.51 | 39.0 | 3.76e-01 | 96.8% | 72.0% |
| 4858721 | 304.60.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like › Ribosomal_L10 | 0.50 | 38.0 | 3.06e-01 | 87.1% | 48.6% |
D2
medium
residues 132-184
Domain cluster:
representative