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rifcsplowo2_12_scaffold_23_prodigal-single.1__X__X__00238
Bact-Virrifcsplowo2_12_scaffold_23_prodigal-single.1__X__X__00238
Identity
- Kingdom:
- phage
Quality
87.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-66
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 59.0 | 5.50e-01 | 100.0% | 64.4% |
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 60.0 | 5.99e-01 | 100.0% | 81.4% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 59.0 | 6.00e-01 | 100.0% | 83.9% |
| 3ntkA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 57.0 | 5.07e-01 | 100.0% | 56.2% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 58.0 | 5.53e-01 | 100.0% | 69.1% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 58.0 | 5.58e-01 | 100.0% | 71.2% |
| 2d9tA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 59.0 | 6.25e-01 | 100.0% | 98.0% |
| 3mp6A05 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 56.0 | 5.47e-01 | 100.0% | 73.0% |
| 2heqA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.75 | 62.0 | 6.45e-01 | 100.0% | 98.1% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 59.0 | 5.79e-01 | 100.0% | 83.9% |
| 2eqmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 57.0 | 5.88e-01 | 100.0% | 96.2% |
| 3pieB05 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 56.0 | 5.50e-01 | 100.0% | 84.4% |
| 7cceA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.68 | 59.0 | 4.40e-01 | 100.0% | 49.7% |
| 2l89A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 59.0 | 4.82e-01 | 100.0% | 52.8% |
| 2fhdA02 | 2.30.30.810 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 58.0 | 5.42e-01 | 100.0% | 79.2% |
| 1w4sA00 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.66 | 57.0 | 4.29e-01 | 100.0% | 49.3% |
| 1whlA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.64 | 57.0 | 4.86e-01 | 100.0% | 80.0% |
| 1vx2I02 | 3.10.290.70 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › | 0.61 | 53.0 | 4.26e-01 | 98.3% | 56.6% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.61 | 46.0 | 4.69e-01 | 93.1% | 89.3% |
| 1m5q101 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 45.0 | 4.36e-01 | 100.0% | 72.1% |
| 3q5zA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 52.0 | 4.19e-01 | 100.0% | 66.9% |
| 3npfB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 52.0 | 5.03e-01 | 100.0% | 92.4% |
| 1ycyA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 41.0 | 4.06e-01 | 100.0% | 67.7% |
| 1s3iA02 | 3.10.25.10 | Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › Formyl transferase, C-terminal domain | 0.58 | 44.0 | 3.77e-01 | 86.2% | 69.6% |
| 3axbA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 46.0 | 3.03e-01 | 94.8% | 63.3% |
| 2rqaA00 | 2.170.150.30 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › RIG-I-like receptor, C-terminal regulatory domain | 0.53 | 42.0 | 3.30e-01 | 91.4% | 50.4% |
| 5jciA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 45.0 | 3.56e-01 | 100.0% | 96.2% |
| 4dapA01 | 2.40.50.580 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 40.0 | 3.68e-01 | 86.2% | 88.7% |
| 4d6wA03 | 2.30.29.130 | Mainly Beta › Roll › PH-domain like › | 0.51 | 35.0 | 3.11e-01 | 100.0% | 45.3% |
| 4fk1A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 43.0 | 3.54e-01 | 98.3% | 97.3% |
| 3ptaA03 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.51 | 41.0 | 3.11e-01 | 100.0% | 39.0% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3555931 | 4.1.1.322 ↗ | beta barrels › SH3 › SH3 › SH3 › GPKOW_C | 0.82 | 67.0 | 5.26e-01 | 100.0% | 44.3% |
| 3885050 | 4.1.1.360 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 | 0.81 | 67.0 | 4.62e-01 | 100.0% | 29.1% |
| 3486495 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 64.0 | 4.42e-01 | 98.3% | 28.0% |
| 3222147 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 64.0 | 6.41e-01 | 100.0% | 85.0% |
| 3405627 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 59.0 | 5.01e-01 | 100.0% | 50.5% |
| 3910433 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 55.0 | 5.35e-01 | 100.0% | 73.8% |
| 2553270 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.71 | 62.0 | 5.75e-01 | 100.0% | 78.1% |
| 5012425 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.70 | 61.0 | 4.65e-01 | 100.0% | 53.6% |
| 3676628 | 4.1.1.162 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF502 | 0.68 | 60.0 | 4.73e-01 | 100.0% | 48.3% |
| 3813762 | 4.25.1.2 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD | 0.68 | 60.0 | 5.77e-01 | 96.6% | 87.7% |
| 3584109 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 60.0 | 4.45e-01 | 100.0% | 63.9% |
| 1421013 | 4.1.1.22 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L27e | 0.67 | 59.0 | 4.44e-01 | 100.0% | 52.9% |
| 3253267 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 58.0 | 5.16e-01 | 100.0% | 70.6% |
| 3410370 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 58.0 | 5.50e-01 | 100.0% | 82.9% |
| 3873627 | 4.1.1.354 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY, PF28930 | 0.65 | 58.0 | 4.58e-01 | 100.0% | 66.1% |
| 3190402 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.64 | 55.0 | 4.13e-01 | 100.0% | 49.3% |
| 3944434 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 46.0 | 3.89e-01 | 79.3% | 88.4% |
| 3798523 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.61 | 52.0 | 4.73e-01 | 100.0% | 92.5% |
| 5042049 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 45.0 | 4.07e-01 | 100.0% | 58.8% |
| 4996021 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 44.0 | 4.07e-01 | 100.0% | 61.3% |
| 4934755 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 48.0 | 4.61e-01 | 100.0% | 78.6% |
| 5037228 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.58 | 43.0 | 4.21e-01 | 100.0% | 76.9% |
| 5011460 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 46.0 | 4.38e-01 | 100.0% | 78.6% |
| 2167708 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 40.0 | 3.92e-01 | 100.0% | 70.8% |
| 3169767 | 1.1.7.49 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ski7_2nd | 0.56 | 50.0 | 3.76e-01 | 100.0% | 51.4% |
| 3172870 | 4.1.1.67 ↗ | beta barrels › SH3 › SH3 › SH3 › FDF | 0.55 | 44.0 | 3.81e-01 | 100.0% | 55.8% |
| 4948178 | 4.1.1.484 ↗ | beta barrels › SH3 › SH3 › SH3 › Lsm_C | 0.54 | 44.0 | 4.20e-01 | 100.0% | 78.6% |
| 4011095 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 43.0 | 2.67e-01 | 94.8% | 26.7% |
| 4480114 | 2003.1.2.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO | 0.52 | 43.0 | 2.56e-01 | 94.8% | 51.6% |
| 4970099 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.51 | 39.0 | 3.22e-01 | 87.9% | 88.7% |
| 3589763 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 35.0 | 2.74e-01 | 77.6% | 72.0% |
| 3629877 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.50 | 42.0 | 2.88e-01 | 96.6% | 49.3% |