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rifcsplowo2_12_scaffold_23_prodigal-single.1__X__X__00253
Bact-Virrifcsplowo2_12_scaffold_23_prodigal-single.1__X__X__00253
Identity
- Kingdom:
- phage
Quality
89.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-96
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3memA02 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.64 | 58.0 | 3.94e-01 | 100.0% | 78.7% |
| 3s6jE02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.62 | 44.0 | 4.72e-01 | 87.2% | 92.8% |
| 2hoqA02 | 1.10.150.520 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.61 | 45.0 | 4.71e-01 | 86.0% | 86.1% |
| 3k9vA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.60 | 50.0 | 3.26e-01 | 97.7% | 69.6% |
| 3cnhB02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.58 | 42.0 | 4.56e-01 | 83.7% | 100.0% |
| 4uskA01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.58 | 50.0 | 3.96e-01 | 100.0% | 47.1% |
| 1uaaA02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.57 | 44.0 | 4.64e-01 | 82.6% | 98.6% |
| 1nyaA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.53 | 42.0 | 3.41e-01 | 88.4% | 89.8% |
| 3pm0A00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.53 | 44.0 | 2.80e-01 | 94.2% | 74.9% |
| 3mkzN00 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.51 | 37.0 | 3.50e-01 | 79.1% | 86.4% |
| 2x3mA00 | 1.25.40.670 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.51 | 44.0 | 3.64e-01 | 98.8% | 93.4% |
| 4i5lB01 | 1.10.238.230 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › | 0.50 | 35.0 | 3.41e-01 | 94.2% | 63.0% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3180704 | 592.6.1.1 ↗ | alpha arrays › PWI domain-like › Pre-mRNA-splicing helicase BRR2 plug domain › Pre-mRNA-splicing helicase BRR2 plug domain › BRR2_plug | 0.71 | 58.0 | 5.25e-01 | 88.4% | 72.2% |
| 3738459 | 6088.1.1.1 ↗ | alpha arrays › Helical bundle domain in elongation factor 3A › Helical bundle domain in elongation factor 3A › Helical bundle domain in elongation factor 3A › 4HB | 0.67 | 51.0 | 5.28e-01 | 82.6% | 100.0% |
| 3428283 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 37.0 | 4.23e-01 | 77.9% | 81.7% |
| 3877842 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.63 | 53.0 | 3.39e-01 | 96.5% | 32.5% |
| 3629888 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.62 | 52.0 | 3.28e-01 | 96.5% | 37.7% |
| 3730817 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.62 | 52.0 | 3.30e-01 | 97.7% | 32.0% |
| 3467989 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 38.0 | 4.35e-01 | 73.3% | 88.3% |
| 4998143 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.60 | 48.0 | 3.65e-01 | 88.4% | 56.3% |
| 4021212 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.59 | 49.0 | 3.15e-01 | 97.7% | 71.4% |
| 3414715 | 1075.1.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_3 | 0.59 | 43.0 | 3.08e-01 | 77.9% | 83.1% |
| 4112431 | 3281.1.1.5 ↗ | alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M,Oxidored_q5_N | 0.57 | 50.0 | 3.20e-01 | 100.0% | 94.3% |
| 3722248 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.55 | 46.0 | 2.89e-01 | 96.5% | 28.7% |
| 3247641 | 103.15.1.0 ↗ | alpha arrays › RuvA-C › Mitoribosomal protein mS23 › Mitoribosomal protein mS23 | 0.54 | 40.0 | 3.79e-01 | 79.1% | 72.4% |
| 3676512 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.53 | 45.0 | 3.49e-01 | 100.0% | 68.2% |
| 4600201 | 3281.1.1.1 ↗ | alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M | 0.53 | 45.0 | 2.88e-01 | 100.0% | 59.9% |
| 3878591 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.52 | 43.0 | 2.73e-01 | 94.2% | 60.6% |
| 4575925 | 3281.1.1.1 ↗ | alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M | 0.51 | 44.0 | 2.81e-01 | 100.0% | 90.1% |