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rifoxya1_full_scaffold_1_prodigal-single.1__X__X__00065
Bact-Virrifoxya1_full_scaffold_1_prodigal-single.1__X__X__00065
Identity
- Kingdom:
- phage
Quality
87.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-177
Domain cluster:
rep: IMGVR_UViG_3300005275_000006-3300005275-Ga0065719_10659036__D3-197
CATH (55)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1pgsA01 | 2.60.120.230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 51.0 | 5.71e-01 | 100.0% | 97.0% |
| 8owfA01 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.67 | 40.0 | 4.85e-01 | 98.9% | 92.8% |
| 1w99A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.66 | 56.0 | 5.50e-01 | 100.0% | 82.7% |
| 4hsqA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 45.0 | 4.95e-01 | 97.7% | 86.8% |
| 3qdhA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 45.0 | 4.76e-01 | 98.3% | 81.4% |
| 7t7zA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.63 | 51.0 | 5.48e-01 | 97.7% | 100.0% |
| 1yi9A02 | 2.60.120.230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 39.0 | 4.33e-01 | 100.0% | 78.1% |
| 2ylkA00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.62 | 46.0 | 5.03e-01 | 98.9% | 93.1% |
| 2wq4A01 | 2.60.120.760 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 44.0 | 5.01e-01 | 100.0% | 99.2% |
| 2zewB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.62 | 48.0 | 5.23e-01 | 99.4% | 98.0% |
| 5z06A01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.61 | 56.0 | 5.64e-01 | 98.9% | 100.0% |
| 1lnsA04 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 55.0 | 5.37e-01 | 100.0% | 89.8% |
| 3hr6A02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 46.0 | 4.81e-01 | 98.3% | 86.6% |
| 1uwwB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 53.0 | 5.35e-01 | 98.9% | 93.3% |
| 2c4xA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 50.0 | 5.31e-01 | 98.9% | 99.4% |
| 6r3mA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.60 | 53.0 | 5.47e-01 | 100.0% | 98.2% |
| 3seeA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 55.0 | 5.15e-01 | 98.9% | 100.0% |
| 1dyoA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 48.0 | 5.11e-01 | 100.0% | 97.4% |
| 8begA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 47.0 | 4.91e-01 | 96.6% | 92.5% |
| 2xbtA00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.59 | 47.0 | 4.91e-01 | 99.4% | 93.0% |
| 3k4zA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 50.0 | 5.22e-01 | 99.4% | 100.0% |
| 4ofqA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 45.0 | 4.78e-01 | 97.1% | 92.3% |
| 3jb4C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 50.0 | 4.50e-01 | 100.0% | 67.2% |
| 5z6pA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.58 | 53.0 | 5.28e-01 | 98.9% | 96.1% |
| 1wmdA02 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 39.0 | 4.59e-01 | 97.1% | 100.0% |
| 2c9aA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 49.0 | 5.06e-01 | 99.4% | 97.5% |
| 5zruA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 49.0 | 5.16e-01 | 97.1% | 100.0% |
| 1sppB00 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.57 | 37.0 | 4.37e-01 | 93.7% | 100.0% |
| 4bq2D01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.56 | 52.0 | 5.08e-01 | 99.4% | 96.8% |
| 3rnsA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 30.0 | 3.63e-01 | 88.0% | 80.6% |
| 7tg5A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 33.0 | 4.01e-01 | 86.3% | 93.5% |
| 3hqxA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 31.0 | 3.77e-01 | 91.4% | 87.6% |
| 2a6vB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 50.0 | 4.68e-01 | 100.0% | 99.5% |
| 5aooC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 48.0 | 4.46e-01 | 100.0% | 75.0% |
| 4mxwD00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 40.0 | 4.46e-01 | 100.0% | 98.5% |
| 3cjiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 50.0 | 4.52e-01 | 100.0% | 73.5% |
| 5fq0A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 31.0 | 3.75e-01 | 89.7% | 86.4% |
| 3vbhC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 50.0 | 4.45e-01 | 100.0% | 72.7% |
| 1nlrA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.54 | 48.0 | 4.44e-01 | 97.1% | 95.0% |
| 1olrA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.54 | 47.0 | 4.40e-01 | 96.6% | 95.1% |
| 3zxaC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 43.0 | 4.23e-01 | 100.0% | 79.4% |
| 4jklA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 48.0 | 4.77e-01 | 99.4% | 93.9% |
| 3es4A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 31.0 | 3.66e-01 | 90.3% | 83.6% |
| 4llfD01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 44.0 | 4.43e-01 | 100.0% | 88.2% |
| 2d40B00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 33.0 | 2.81e-01 | 97.7% | 38.0% |
| 5yl1A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 47.0 | 4.65e-01 | 100.0% | 94.5% |
| 4yrdA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 31.0 | 3.63e-01 | 84.6% | 84.0% |
| 7zvmA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 31.0 | 3.84e-01 | 90.9% | 100.0% |
| 6eiwA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 47.0 | 4.59e-01 | 100.0% | 95.3% |
| 1opoC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 42.0 | 4.33e-01 | 100.0% | 92.7% |
| 3obaA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 47.0 | 4.49e-01 | 100.0% | 86.3% |
| 2f68X02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 37.0 | 3.87e-01 | 99.4% | 80.9% |
| 3ebrA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 32.0 | 3.43e-01 | 93.7% | 70.5% |
| 5ewnA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 45.0 | 4.50e-01 | 100.0% | 92.9% |
| 3jciA00 | 2.60.120.950 | Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein | 0.51 | 45.0 | 4.44e-01 | 100.0% | 90.0% |
ECOD (85)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4940276 | 10.2.1.75 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CBM96 | 0.82 | 75.0 | 7.54e-01 | 100.0% | 96.0% |
| 4622880 | 10.2.1.75 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CBM96 | 0.81 | 73.0 | 7.49e-01 | 98.9% | 100.0% |
| 5059807 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.79 | 75.0 | 7.00e-01 | 99.4% | 100.0% |
| 5002813 | 10.2.1.104 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Disaggr_repeat | 0.79 | 75.0 | 6.96e-01 | 98.9% | 90.0% |
| 4984620 | 10.2.1.104 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Disaggr_repeat | 0.79 | 75.0 | 7.31e-01 | 100.0% | 98.9% |
| 5058402 | 10.2.1.75 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CBM96 | 0.79 | 75.0 | 7.42e-01 | 100.0% | 98.9% |
| 5020663 | 10.2.1.104 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Disaggr_repeat | 0.79 | 74.0 | 5.01e-01 | 100.0% | 33.5% |
| 5075659 | 10.2.1.75 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CBM96 | 0.78 | 67.0 | 6.79e-01 | 89.1% | 100.0% |
| 5032741 | 10.2.1.75 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CBM96 | 0.78 | 71.0 | 7.24e-01 | 98.9% | 100.0% |
| 4970100 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.78 | 72.0 | 7.26e-01 | 97.7% | 99.4% |
| 5056076 | 10.2.1.75 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CBM96 | 0.78 | 73.0 | 7.14e-01 | 100.0% | 98.9% |
| 5027796 | 10.2.1.75 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CBM96 | 0.77 | 72.0 | 7.27e-01 | 100.0% | 98.9% |
| 4054976 | 10.2.1.75 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CBM96 | 0.77 | 69.0 | 7.18e-01 | 98.3% | 100.0% |
| 5060100 | 10.2.1.75 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CBM96 | 0.76 | 70.0 | 6.71e-01 | 98.3% | 98.0% |
| 3539303 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.75 | 56.0 | 5.38e-01 | 100.0% | 67.0% |
| 4631012 | 10.2.1.75 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CBM96 | 0.75 | 70.0 | 6.63e-01 | 100.0% | 84.9% |
| 4362871 | 10.2.1.86 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › But2 | 0.74 | 64.0 | 6.70e-01 | 98.9% | 100.0% |
| 3561036 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.73 | 53.0 | 5.11e-01 | 100.0% | 66.7% |
| 4542786 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.72 | 60.0 | 5.65e-01 | 100.0% | 72.9% |
| 3845898 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.71 | 53.0 | 5.11e-01 | 100.0% | 67.0% |
| 3063519 | 10.9.1.4 ↗ | beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin › DUF7868 | 0.71 | 51.0 | 5.86e-01 | 98.3% | 100.0% |
| 3307137 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.70 | 49.0 | 4.52e-01 | 100.0% | 56.0% |
| 3480419 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.70 | 56.0 | 5.06e-01 | 100.0% | 63.5% |
| 4017877 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.69 | 61.0 | 6.32e-01 | 98.3% | 100.0% |
| 4944599 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.69 | 48.0 | 5.34e-01 | 100.0% | 91.1% |
| 3636445 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.69 | 61.0 | 6.25e-01 | 99.4% | 100.0% |
| 3364648 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.69 | 49.0 | 4.20e-01 | 100.0% | 46.5% |
| 3926936 | 10.10.1.1 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT | 0.68 | 37.0 | 4.46e-01 | 70.3% | 79.1% |
| 4011220 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.68 | 47.0 | 5.41e-01 | 99.4% | 98.4% |
| 157233 | 10.32.1.18 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Endotoxin_C | 0.66 | 56.0 | 5.74e-01 | 100.0% | 92.4% |
| None | — | 0.66 | 51.0 | 4.41e-01 | 100.0% | 52.2% | |
| 3941823 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.66 | 53.0 | 5.65e-01 | 100.0% | 98.7% |
| 4091603 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.65 | 53.0 | 5.03e-01 | 100.0% | 73.7% |
| 3867993 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.65 | 54.0 | 5.15e-01 | 100.0% | 76.1% |
| 4324122 | 10.32.1.18 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Endotoxin_C | 0.64 | 55.0 | 5.41e-01 | 100.0% | 87.0% |
| 3927221 | 10.32.1.213 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 | 0.64 | 40.0 | 4.70e-01 | 85.1% | 90.8% |
| 4304353 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.63 | 52.0 | 5.47e-01 | 100.0% | 97.4% |
| 4308710 | 11.1.5.52 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Sgo0707_N2 | 0.63 | 45.0 | 4.80e-01 | 99.4% | 83.2% |
| 4456175 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.63 | 53.0 | 4.91e-01 | 100.0% | 70.9% |
| 3285145 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.62 | 58.0 | 5.30e-01 | 100.0% | 98.7% |
| 5041444 | 10.1.2.184 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C | 0.62 | 56.0 | 5.61e-01 | 100.0% | 95.4% |
| 3416828 | 10.32.1.188 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TMEM181_GOLD | 0.62 | 49.0 | 5.29e-01 | 100.0% | 99.3% |
| 4256871 | 10.32.1.18 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Endotoxin_C | 0.62 | 54.0 | 5.46e-01 | 100.0% | 93.3% |
| 5041422 | 10.1.2.184 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C | 0.61 | 57.0 | 5.53e-01 | 100.0% | 93.7% |
| 3805853 | 10.32.1.192 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID | 0.61 | 49.0 | 4.79e-01 | 100.0% | 76.9% |
| 1209559 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.61 | 50.0 | 5.29e-01 | 98.9% | 98.7% |
| 3691373 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.61 | 56.0 | 5.14e-01 | 100.0% | 96.9% |
| 3332971 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.61 | 40.0 | 3.42e-01 | 100.0% | 40.3% |
| 5040077 | 10.1.2.184 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C | 0.60 | 56.0 | 5.53e-01 | 100.0% | 97.3% |
| 3778801 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.60 | 42.0 | 4.65e-01 | 100.0% | 89.3% |
| 5064594 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.60 | 46.0 | 4.89e-01 | 96.0% | 91.0% |
| 1159 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.60 | 55.0 | 5.01e-01 | 100.0% | 95.3% |
| 3008973 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.59 | 45.0 | 4.88e-01 | 99.4% | 94.0% |
| 4946469 | 10.1.2.184 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C | 0.59 | 55.0 | 5.21e-01 | 100.0% | 97.6% |
| 4127487 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.59 | 52.0 | 5.12e-01 | 100.0% | 89.2% |
| 5083402 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.59 | 55.0 | 5.39e-01 | 100.0% | 95.1% |
| 3412819 | 10.3.1.1 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF | 0.59 | 45.0 | 4.85e-01 | 100.0% | 95.2% |
| 5051140 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.59 | 54.0 | 5.28e-01 | 99.4% | 100.0% |
| 5083095 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.58 | 50.0 | 5.21e-01 | 98.3% | 100.0% |
| 4209070 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.58 | 54.0 | 5.30e-01 | 99.4% | 97.8% |
| 3387903 | 11.1.1.449 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF2393 | 0.58 | 34.0 | 4.31e-01 | 98.3% | 100.0% |
| 3188062 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.58 | 46.0 | 4.64e-01 | 99.4% | 84.6% |
| 3586546 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.57 | 40.0 | 4.49e-01 | 100.0% | 93.8% |
| 4161767 | 10.32.1.271 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF27237 | 0.57 | 47.0 | 5.01e-01 | 98.9% | 100.0% |
| 3396410 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.57 | 51.0 | 5.14e-01 | 99.4% | 97.1% |
| 4357938 | 10.12.1.154 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MannoseP_isomer, ManC_GMP_beta-helix | 0.56 | 33.0 | 3.36e-01 | 93.1% | 57.1% |
| 3691709 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.56 | 50.0 | 4.92e-01 | 100.0% | 91.8% |
| 4526608 | 385.1.1.2 ↗ | few secondary structure elements › Cystine-knot cytokines › Cystine-knot cytokines › Cystine-knot cytokines › TGF_beta | 0.56 | 44.0 | 3.65e-01 | 100.0% | 46.8% |
| 5006324 | 10.1.2.201 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PF27237 | 0.56 | 49.0 | 5.03e-01 | 99.4% | 100.0% |
| 3971446 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.56 | 33.0 | 4.01e-01 | 96.0% | 89.6% |
| 3838063 | 10.12.1.98 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MannoseP_isomer | 0.55 | 34.0 | 3.96e-01 | 93.1% | 85.6% |
| 4954842 | 10.12.1.98 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MannoseP_isomer | 0.54 | 32.0 | 3.99e-01 | 96.6% | 99.0% |
| 5067704 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.53 | 48.0 | 4.76e-01 | 97.1% | 100.0% |
| 3600415 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.53 | 47.0 | 4.80e-01 | 100.0% | 100.0% |
| 4942033 | 10.12.1.98 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MannoseP_isomer | 0.52 | 33.0 | 3.91e-01 | 92.6% | 93.9% |
| 4174964 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.52 | 30.0 | 2.99e-01 | 87.4% | 51.4% |
| 1945727 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.52 | 48.0 | 4.20e-01 | 100.0% | 68.6% |
| 3823147 | 10.32.1.37 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin | 0.52 | 47.0 | 4.28e-01 | 100.0% | 82.1% |
| 4949707 | 10.12.1.98 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MannoseP_isomer | 0.52 | 30.0 | 3.01e-01 | 87.4% | 52.8% |
| 4197366 | 10.32.1.265 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29487 | 0.51 | 46.0 | 4.53e-01 | 98.3% | 100.0% |
| 4551881 | 10.2.1.39 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cu2_monoox_C | 0.51 | 39.0 | 4.02e-01 | 80.0% | 92.1% |
| 3493267 | 10.32.1.21 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PAW | 0.51 | 46.0 | 4.31e-01 | 100.0% | 91.4% |
| 3200999 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.51 | 36.0 | 4.05e-01 | 95.4% | 94.0% |
| 3696356 | 10.12.1.3 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 | 0.51 | 36.0 | 3.85e-01 | 97.7% | 84.7% |
| 4020832 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.50 | 35.0 | 4.04e-01 | 95.4% | 98.4% |
D2
high
residues 249-310_589-779
Domain cluster:
rep: IMGVR_UViG_648028040_000001-648028040-648194435__D26-229
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3foaB01 | 3.40.50.11780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.80 | 66.0 | 7.15e-01 | 93.7% | 97.7% |
| 4iilA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.70 | 38.0 | 5.09e-01 | 90.9% | 97.1% |
| 2h4aA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 35.0 | 4.56e-01 | 95.7% | 85.8% |
| 4m88A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 35.0 | 4.61e-01 | 100.0% | 86.7% |
| 3qi7A01 | 3.40.50.11400 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.68 | 39.0 | 4.99e-01 | 76.7% | 95.9% |
| 4ywrA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.63 | 45.0 | 4.73e-01 | 96.4% | 80.3% |
| 3i45A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 37.0 | 4.34e-01 | 93.7% | 81.1% |
| 2zadA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.60 | 38.0 | 4.00e-01 | 96.0% | 68.3% |
| 2ddmB00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.59 | 47.0 | 4.60e-01 | 82.2% | 87.5% |
| 4n4pD00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 40.0 | 3.82e-01 | 96.4% | 59.7% |
| 1jxhA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.57 | 45.0 | 4.63e-01 | 82.2% | 89.5% |
| 5l2pA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 42.0 | 3.94e-01 | 74.7% | 88.9% |
| 4xkyA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 39.0 | 3.76e-01 | 96.0% | 59.7% |
| 3rm5B01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.56 | 45.0 | 4.27e-01 | 82.6% | 78.6% |
| 2pcqA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 38.0 | 3.68e-01 | 96.0% | 59.9% |
| 5mn7A01 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.56 | 36.0 | 4.37e-01 | 94.1% | 98.8% |
| 2jjmA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.55 | 38.0 | 4.44e-01 | 99.6% | 97.8% |
| 3qfeB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 38.0 | 3.58e-01 | 96.4% | 57.6% |
| 1vr6A02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 36.0 | 3.62e-01 | 96.0% | 63.1% |
| 2wj6A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 41.0 | 4.52e-01 | 96.4% | 97.5% |
| 2nx2A00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 29.0 | 3.39e-01 | 73.1% | 72.5% |
| 1mumA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.53 | 38.0 | 3.70e-01 | 96.0% | 64.0% |
| 2waaA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.53 | 41.0 | 4.45e-01 | 79.4% | 97.6% |
| 3vzpC00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 43.0 | 4.42e-01 | 86.2% | 98.8% |
| 2vptA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.52 | 39.0 | 4.28e-01 | 75.5% | 98.0% |
| 7vm0B01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.52 | 39.0 | 4.04e-01 | 76.7% | 96.7% |
| 3i3oG00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 43.0 | 4.40e-01 | 86.6% | 92.2% |
| 2x7vA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.51 | 41.0 | 3.94e-01 | 95.3% | 72.7% |
| 1m3uA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.51 | 36.0 | 3.58e-01 | 96.0% | 67.9% |
| 1g0nB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 44.0 | 4.42e-01 | 93.7% | 91.3% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995822 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.91 | 85.0 | 8.53e-01 | 98.4% | 94.9% |
| 4889792 | 2499.2.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 | 0.85 | 71.0 | 7.62e-01 | 98.8% | 98.6% |
| 3978226 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.84 | 80.0 | 7.65e-01 | 97.6% | 91.8% |
| 5004680 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.83 | 78.0 | 7.61e-01 | 97.6% | 91.6% |
| 3944167 | 2499.2.1.2 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N | 0.82 | 77.0 | 7.55e-01 | 97.2% | 91.5% |
| 1518917 | 2499.2.1.2 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N | 0.81 | 76.0 | 7.44e-01 | 97.6% | 90.8% |
| 4888782 | 2499.2.1.2 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N | 0.81 | 75.0 | 7.19e-01 | 94.9% | 92.8% |
| 2468538 | 2499.2.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 | 0.79 | 74.0 | 7.40e-01 | 98.4% | 98.1% |
| 4889794 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.70 | 49.0 | 5.27e-01 | 70.8% | 87.8% |
| 3947020 | 2007.1.2.10 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 | 0.70 | 34.0 | 4.52e-01 | 100.0% | 84.4% |
| 5058505 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.66 | 38.0 | 4.82e-01 | 93.7% | 95.2% |
| 1174548 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.58 | 38.0 | 3.78e-01 | 96.4% | 61.5% |
| 3945272 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.58 | 40.0 | 3.87e-01 | 96.4% | 61.6% |
| 2099381 | 7579.1.1.36 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 | 0.57 | 42.0 | 3.94e-01 | 74.7% | 88.9% |
| 3017945 | 7579.1.1.36 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 | 0.56 | 41.0 | 3.85e-01 | 74.3% | 83.4% |
| 4960816 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.55 | 37.0 | 4.39e-01 | 94.1% | 98.3% |
| 3184021 | 7579.1.1.36 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 | 0.54 | 42.0 | 3.60e-01 | 79.4% | 78.8% |
| 4020066 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.53 | 40.0 | 3.65e-01 | 96.4% | 58.8% |
| 4989351 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.52 | 38.0 | 3.89e-01 | 95.3% | 74.1% |
| 4254835 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.52 | 40.0 | 3.93e-01 | 95.3% | 72.4% |
| 3600275 | 2007.1.2.27 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_A-cyclase | 0.51 | 43.0 | 3.90e-01 | 88.9% | 99.7% |
| 4455616 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.51 | 41.0 | 3.58e-01 | 96.0% | 54.3% |
| 5055608 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.51 | 38.0 | 3.84e-01 | 95.3% | 76.3% |
| 4182538 | 2002.1.1.206 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF561 | 0.50 | 38.0 | 3.87e-01 | 96.0% | 79.9% |
D3
high
residues 319-461_566-578
Domain cluster:
rep: MT366761.1__QJT71116.1__GR11A_00079__00078__D93-218
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3b4nA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 24.0 | 3.11e-01 | 89.1% | 68.2% |
| 3d3lA02 | 3.10.450.60 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 29.0 | 3.81e-01 | 76.9% | 100.0% |
| 3rbyA02 | 2.40.128.310 | Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, C-terminal domain | 0.53 | 25.0 | 3.06e-01 | 100.0% | 68.4% |
| 1u5kA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 22.0 | 2.89e-01 | 82.7% | 67.1% |
| 6ro0F00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 25.0 | 2.99e-01 | 82.7% | 69.4% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995821 | 3629.1.1.0 ↗ | beta sandwiches › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain | 0.79 | 72.0 | 7.13e-01 | 100.0% | 92.5% |
| 5034706 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.58 | 26.0 | 3.63e-01 | 71.2% | 86.7% |
| 3990341 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.57 | 37.0 | 4.40e-01 | 84.0% | 97.1% |
| 5056218 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.54 | 25.0 | 3.55e-01 | 73.1% | 94.3% |
| 4975626 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.52 | 29.0 | 3.08e-01 | 82.1% | 58.0% |
D4
high
residues 464-561
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2greF02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.66 | 50.0 | 5.48e-01 | 99.0% | 100.0% |
| 5eanA01 | 2.40.30.270 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.63 | 52.0 | 5.08e-01 | 100.0% | 81.5% |
| 3qnfC01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.62 | 42.0 | 3.33e-01 | 100.0% | 33.2% |
| 2dlgA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 39.0 | 4.22e-01 | 94.9% | 78.8% |
| 2qf4A02 | 2.40.10.350 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 | 0.60 | 43.0 | 4.48e-01 | 84.7% | 80.2% |
| 1ylnA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 45.0 | 4.31e-01 | 88.8% | 70.2% |
| 3bnwB00 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.58 | 49.0 | 4.24e-01 | 100.0% | 58.6% |
| 2piaA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 51.0 | 5.05e-01 | 100.0% | 92.3% |
| 4a53A01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 35.0 | 4.14e-01 | 76.5% | 91.9% |
| 4m78N00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 37.0 | 4.26e-01 | 96.9% | 91.5% |
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 40.0 | 4.25e-01 | 95.9% | 82.6% |
| 3wdhA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 41.0 | 4.14e-01 | 95.9% | 77.1% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 38.0 | 4.07e-01 | 78.6% | 81.9% |
| 2p5zX01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.56 | 48.0 | 4.00e-01 | 92.9% | 89.8% |
| 3jb9F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 38.0 | 4.11e-01 | 79.6% | 85.4% |
| 1m5q101 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 36.0 | 4.13e-01 | 78.6% | 95.6% |
| 4f7uG00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 37.0 | 4.24e-01 | 77.6% | 98.5% |
| 4c92G00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 38.0 | 4.21e-01 | 79.6% | 93.3% |
| 4uhvA01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.54 | 47.0 | 3.73e-01 | 93.9% | 81.0% |
| 3l5iA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 37.0 | 3.91e-01 | 99.0% | 78.4% |
| 5mkiH00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 36.0 | 4.12e-01 | 78.6% | 94.4% |
| 1d3bC00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 37.0 | 4.22e-01 | 96.9% | 98.6% |
| 2qi2A01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.54 | 39.0 | 3.92e-01 | 100.0% | 73.1% |
| 3zn6A02 | 2.60.40.3410 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 43.0 | 4.50e-01 | 98.0% | 97.7% |
| 3obyA01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.54 | 39.0 | 3.82e-01 | 100.0% | 68.8% |
| 4c92B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 38.0 | 3.76e-01 | 78.6% | 68.6% |
| 1b34B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 36.0 | 4.05e-01 | 98.0% | 91.9% |
| 4m7dA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 35.0 | 4.10e-01 | 77.6% | 100.0% |
| 6asoH00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 33.0 | 3.54e-01 | 77.6% | 73.5% |
| 4f7uF00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 36.0 | 4.00e-01 | 96.9% | 95.9% |
| 1iarB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 39.0 | 3.96e-01 | 100.0% | 84.4% |
| 1eerC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 38.0 | 3.89e-01 | 99.0% | 79.4% |
| 5z6pA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.52 | 47.0 | 3.83e-01 | 100.0% | 61.2% |
| 3lzqA00 | 2.60.40.2480 | Mainly Beta › Sandwich › Immunoglobulin-like › Periplasmic metal-binding protein Tp34-type | 0.51 | 45.0 | 3.88e-01 | 99.0% | 73.2% |
| 1wmdA02 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 41.0 | 3.90e-01 | 100.0% | 72.6% |
| 4bq2D01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.51 | 46.0 | 3.70e-01 | 100.0% | 58.7% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4166012 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.78 | 54.0 | 6.06e-01 | 100.0% | 94.7% |
| 4197108 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.77 | 53.0 | 5.51e-01 | 100.0% | 76.7% |
| 4890345 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.76 | 54.0 | 5.73e-01 | 100.0% | 84.7% |
| 4194551 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.76 | 51.0 | 5.71e-01 | 100.0% | 90.7% |
| 4660673 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.75 | 54.0 | 5.79e-01 | 100.0% | 88.2% |
| 3945528 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 53.0 | 5.82e-01 | 100.0% | 91.3% |
| 4402716 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.73 | 51.0 | 5.45e-01 | 100.0% | 83.5% |
| 4636885 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.73 | 52.0 | 5.77e-01 | 99.0% | 96.0% |
| 4947671 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 51.0 | 5.51e-01 | 96.9% | 100.0% |
| 3243970 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 58.0 | 5.84e-01 | 100.0% | 95.0% |
| 4950699 | 3613.1.1.0 ↗ | beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain | 0.65 | 47.0 | 5.00e-01 | 87.8% | 85.9% |
| 5074909 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 50.0 | 5.26e-01 | 100.0% | 96.6% |
| 3321067 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 45.0 | 4.66e-01 | 95.9% | 84.4% |
| 3262455 | 1.1.7.90 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ZNFX1 | 0.61 | 54.0 | 5.46e-01 | 100.0% | 99.0% |
| 3507639 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.61 | 40.0 | 4.61e-01 | 98.0% | 95.7% |
| 3265105 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.60 | 42.0 | 4.33e-01 | 100.0% | 76.8% |
| 5007131 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.59 | 51.0 | 5.18e-01 | 100.0% | 97.9% |
| 3979552 | 219.1.1.90 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF1287 | 0.59 | 38.0 | 3.12e-01 | 100.0% | 36.6% |
| 4980898 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 52.0 | 5.25e-01 | 100.0% | 98.0% |
| 3448975 | 4.1.1.66 ↗ | beta barrels › SH3 › SH3 › SH3 › LBR_tudor | 0.58 | 36.0 | 4.35e-01 | 74.5% | 95.4% |
| 3793196 | 4.1.1.71 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin7 | 0.58 | 37.0 | 3.88e-01 | 76.5% | 71.1% |
| 3214326 | 4.1.1.81 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM14 | 0.58 | 37.0 | 4.22e-01 | 76.5% | 90.0% |
| 2701178 | 4.1.1.71 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin7 | 0.57 | 38.0 | 4.06e-01 | 78.6% | 78.2% |
| 3772638 | 4.1.1.71 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin7 | 0.56 | 38.0 | 4.14e-01 | 78.6% | 84.0% |
| 3328647 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.56 | 37.0 | 3.94e-01 | 99.0% | 77.6% |
| 3740204 | 4.1.1.71 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin7 | 0.56 | 37.0 | 3.97e-01 | 77.6% | 78.8% |
| 4987003 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.55 | 36.0 | 4.23e-01 | 77.6% | 100.0% |
| 4485354 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.55 | 39.0 | 3.98e-01 | 79.6% | 75.5% |
| 4347919 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.55 | 41.0 | 4.22e-01 | 100.0% | 86.7% |
| 3271407 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 39.0 | 4.22e-01 | 96.9% | 88.2% |
| 3389662 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.54 | 36.0 | 3.92e-01 | 76.5% | 82.5% |
| 4990775 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.54 | 35.0 | 3.91e-01 | 78.6% | 86.7% |
| 5011460 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 36.0 | 4.06e-01 | 78.6% | 94.3% |
| 3598657 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 37.0 | 3.74e-01 | 78.6% | 70.0% |
| 3259326 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 41.0 | 4.16e-01 | 100.0% | 83.0% |
| 3691572 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.54 | 37.0 | 4.10e-01 | 78.6% | 88.7% |
| 4983255 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.54 | 36.0 | 4.08e-01 | 96.9% | 92.0% |
| 4934755 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 35.0 | 4.04e-01 | 77.6% | 94.3% |
| 3598832 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 34.0 | 4.07e-01 | 74.5% | 98.5% |
| 5042049 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 35.0 | 3.76e-01 | 78.6% | 77.6% |
| 4974641 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.53 | 35.0 | 4.06e-01 | 77.6% | 95.7% |
| 3258918 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.53 | 38.0 | 3.77e-01 | 79.6% | 69.5% |
| 4932541 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.53 | 36.0 | 4.07e-01 | 96.9% | 94.5% |
| 4948178 | 4.1.1.484 ↗ | beta barrels › SH3 › SH3 › SH3 › Lsm_C | 0.53 | 35.0 | 4.04e-01 | 78.6% | 95.7% |
| 5037228 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.53 | 35.0 | 4.03e-01 | 77.6% | 100.0% |
| 1549365 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.53 | 37.0 | 4.00e-01 | 96.9% | 86.7% |
| 5077846 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.52 | 36.0 | 3.97e-01 | 78.6% | 92.0% |
| 3258964 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 38.0 | 3.96e-01 | 95.9% | 84.4% |
| 4971102 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.52 | 36.0 | 4.07e-01 | 95.9% | 98.6% |
| 150686 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.52 | 31.0 | 3.78e-01 | 71.4% | 96.7% |
| 4996021 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 36.0 | 3.90e-01 | 95.9% | 86.3% |
| 5026934 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.52 | 37.0 | 4.00e-01 | 98.0% | 90.0% |
| 5046415 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 38.0 | 3.54e-01 | 100.0% | 60.8% |
| 3999729 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.52 | 33.0 | 3.44e-01 | 72.4% | 70.8% |
| 3812580 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.51 | 35.0 | 3.25e-01 | 77.6% | 56.1% |
| 3626400 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.51 | 36.0 | 3.34e-01 | 79.6% | 56.2% |
| 3610074 | 4.1.1.81 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM14 | 0.50 | 37.0 | 3.60e-01 | 76.5% | 71.8% |
| 3703320 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.50 | 38.0 | 4.12e-01 | 96.9% | 98.7% |
| 2632533 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.50 | 34.0 | 3.94e-01 | 76.5% | 100.0% |
D5
medium
residues 802-873
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hxlA05 | 3.30.360.90 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › | 0.83 | 63.0 | 6.46e-01 | 83.3% | 82.6% |
| 4mt1A06 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.72 | 54.0 | 4.79e-01 | 86.1% | 56.4% |
| 8f4rA02 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.71 | 54.0 | 4.91e-01 | 86.1% | 61.5% |
| 6s2vC02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.70 | 53.0 | 4.22e-01 | 80.6% | 46.9% |
| 5uayA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.69 | 45.0 | 4.33e-01 | 79.2% | 57.8% |
| 3w9iA06 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.69 | 52.0 | 4.63e-01 | 84.7% | 56.9% |
| 1pu1A00 | 3.30.300.100 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like | 0.68 | 51.0 | 4.76e-01 | 80.6% | 64.8% |
| 1q2lA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.68 | 50.0 | 3.48e-01 | 77.8% | 26.8% |
| 4djbA00 | 3.30.70.2870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 | 0.65 | 48.0 | 4.09e-01 | 81.9% | 48.3% |
| 3hheA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.65 | 46.0 | 4.49e-01 | 80.6% | 67.9% |
| 2nvmA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.63 | 43.0 | 3.79e-01 | 79.2% | 49.0% |
| 2nraC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 48.0 | 4.31e-01 | 83.3% | 71.6% |
| 4mjgA00 | 3.30.2030.30 | Alpha Beta › 2-Layer Sandwich › TBP-like › | 0.62 | 47.0 | 3.62e-01 | 83.3% | 37.3% |
| 4za1C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 39.0 | 3.66e-01 | 83.3% | 50.0% |
| 3er7B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 41.0 | 3.52e-01 | 70.8% | 73.2% |
| 2od6C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 42.0 | 3.80e-01 | 80.6% | 53.3% |
| 4k3bA03 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.58 | 43.0 | 4.09e-01 | 83.3% | 70.7% |
| 2xefA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.58 | 45.0 | 2.97e-01 | 84.7% | 19.4% |
| 5o6uB00 | 3.30.70.2540 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › CRISPR-associated endoribonuclease Cas6/Csy4 | 0.58 | 41.0 | 3.10e-01 | 79.2% | 29.7% |
| 3m2tA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.58 | 44.0 | 3.52e-01 | 83.3% | 56.6% |
| 3nybA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.58 | 41.0 | 3.65e-01 | 77.8% | 50.0% |
| 4oycB00 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.58 | 42.0 | 3.99e-01 | 79.2% | 64.0% |
| 1s7iA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.57 | 44.0 | 3.70e-01 | 83.3% | 83.1% |
| 1tr0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 42.0 | 3.76e-01 | 83.3% | 54.7% |
| 5xzqF00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 43.0 | 3.84e-01 | 84.7% | 57.3% |
| 3bb5A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 40.0 | 3.63e-01 | 83.3% | 53.4% |
| 3eehA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.56 | 35.0 | 3.03e-01 | 72.2% | 39.7% |
| 3l7xA00 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.56 | 41.0 | 3.30e-01 | 81.9% | 63.1% |
| 3anoA00 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.56 | 41.0 | 3.30e-01 | 81.9% | 41.8% |
| 6x6aA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 41.0 | 2.74e-01 | 77.8% | 75.8% |
| 2vfrA04 | 3.30.70.2520 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 38.0 | 3.60e-01 | 77.8% | 59.6% |
| 1mwqA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.54 | 38.0 | 3.45e-01 | 75.0% | 54.0% |
| 3znuA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.54 | 43.0 | 3.91e-01 | 86.1% | 83.0% |
| 6fdfA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 40.0 | 2.97e-01 | 81.9% | 48.2% |
| 1s67L00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 37.0 | 3.18e-01 | 81.9% | 44.5% |
| 3qv2A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 39.0 | 2.92e-01 | 80.6% | 47.5% |
| 3wa2X01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 39.0 | 3.76e-01 | 81.9% | 71.3% |
| 1o51A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 36.0 | 3.45e-01 | 72.2% | 58.4% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 38.0 | 3.73e-01 | 79.2% | 93.8% |
| 1oi2A02 | 3.30.1180.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › Dihydroxyacetone kinase; domain 2 | 0.52 | 38.0 | 3.03e-01 | 79.2% | 82.7% |
| 4i8qA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.52 | 41.0 | 2.76e-01 | 87.5% | 63.6% |
| 3bp1A02 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.52 | 36.0 | 2.96e-01 | 72.2% | 55.6% |
| 1av5A00 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.51 | 38.0 | 3.36e-01 | 81.9% | 54.9% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4957559 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.98 | 89.0 | 7.74e-01 | 94.4% | 76.0% |
| 3980756 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.91 | 85.0 | 7.33e-01 | 100.0% | 71.4% |
| 4433785 | 283.2.1.4 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GP46 | 0.82 | 59.0 | 4.82e-01 | 81.9% | 42.3% |
| 4233442 | 304.4.1.54 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Amnionless | 0.71 | 53.0 | 4.41e-01 | 79.2% | 50.0% |
| 4945650 | 878.1.1.0 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 | 0.69 | 53.0 | 4.79e-01 | 83.3% | 65.0% |
| 2907089 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.69 | 54.0 | 4.66e-01 | 84.7% | 57.1% |
| 4004108 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.68 | 49.0 | 3.35e-01 | 76.4% | 88.4% |
| 3787852 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.67 | 52.0 | 4.39e-01 | 83.3% | 50.0% |
| 3385833 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.67 | 52.0 | 3.34e-01 | 86.1% | 42.2% |
| 3281978 | 304.159.1.1 ↗ | a+b two layers › Alpha-beta plaits › Alpha-beta plait domain in NisB › Alpha-beta plait domain in NisB › Lant_dehydr_C | 0.67 | 45.0 | 4.09e-01 | 80.6% | 51.0% |
| 3484890 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.66 | 50.0 | 4.56e-01 | 80.6% | 88.4% |
| 4898995 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.66 | 52.0 | 4.87e-01 | 86.1% | 92.2% |
| 3974097 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.66 | 46.0 | 3.96e-01 | 87.5% | 45.0% |
| 3642268 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.65 | 49.0 | 4.15e-01 | 80.6% | 76.7% |
| 1312370 | 304.28.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › ACR_tran | 0.63 | 47.0 | 4.09e-01 | 86.1% | 51.8% |
| 4974677 | 312.1.1.0 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related | 0.62 | 46.0 | 3.66e-01 | 81.9% | 63.9% |
| 4947993 | 283.2.1.19 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › NMD3 | 0.61 | 47.0 | 4.14e-01 | 84.7% | 72.7% |
| 4002369 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.61 | 44.0 | 4.12e-01 | 79.2% | 61.1% |
| 3409849 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.60 | 48.0 | 3.22e-01 | 93.1% | 35.5% |
| 4865069 | 304.4.1.14 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dabb | 0.60 | 43.0 | 3.87e-01 | 83.3% | 53.4% |
| 4588051 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.60 | 42.0 | 3.77e-01 | 77.8% | 51.9% |
| 4538612 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.60 | 46.0 | 2.99e-01 | 87.5% | 34.8% |
| 4661002 | 312.1.1.2 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › HIT | 0.59 | 44.0 | 3.68e-01 | 81.9% | 48.5% |
| 3597539 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 44.0 | 2.94e-01 | 84.7% | 39.1% |
| 4936297 | 304.48.1.32 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › TiaS-FLD | 0.59 | 45.0 | 3.50e-01 | 86.1% | 36.6% |
| 3580612 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.59 | 45.0 | 3.57e-01 | 84.7% | 85.8% |
| 4025593 | 327.6.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like | 0.59 | 40.0 | 3.93e-01 | 72.2% | 68.8% |
| 4941364 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.58 | 47.0 | 4.23e-01 | 91.7% | 94.3% |
| 3937002 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.58 | 46.0 | 3.01e-01 | 88.9% | 41.5% |
| 4998447 | 312.1.1.2 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › HIT | 0.58 | 43.0 | 3.43e-01 | 81.9% | 40.6% |
| 3324335 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.58 | 43.0 | 3.33e-01 | 81.9% | 47.1% |
| 5080980 | 330.2.1.1 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › Ribosomal_S30AE | 0.58 | 44.0 | 3.94e-01 | 86.1% | 92.7% |
| 5054553 | 7528.1.1.1 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_I | 0.57 | 41.0 | 3.11e-01 | 77.8% | 54.7% |
| 3612262 | 1189.1.1.0 ↗ | alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor | 0.57 | 42.0 | 2.72e-01 | 79.2% | 67.6% |
| 3952115 | 312.1.1.2 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › HIT | 0.57 | 42.0 | 3.29e-01 | 81.9% | 59.4% |
| 3950071 | 312.1.1.2 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › HIT | 0.57 | 42.0 | 3.27e-01 | 81.9% | 36.7% |
| 3717300 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.56 | 45.0 | 2.74e-01 | 86.1% | 55.5% |
| 4873159 | 312.1.1.2 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › HIT | 0.56 | 41.0 | 3.65e-01 | 80.6% | 86.5% |
| 4971261 | 312.1.1.2 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › HIT | 0.56 | 41.0 | 3.37e-01 | 81.9% | 44.0% |
| 3520324 | 312.1.1.10 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › DUF4931_N | 0.56 | 41.0 | 3.53e-01 | 81.9% | 52.0% |
| 4297794 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.56 | 41.0 | 2.84e-01 | 81.9% | 55.7% |
| 3600252 | 279.1.1.0 ↗ | a+b complex topology › LDH C-terminal domain-like › LDH C-terminal domain-like › LDH C-terminal domain-like | 0.55 | 36.0 | 2.75e-01 | 72.2% | 28.0% |
| 4991693 | 312.1.1.2 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › HIT | 0.55 | 42.0 | 3.34e-01 | 83.3% | 42.6% |
| 4373561 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.55 | 39.0 | 3.54e-01 | 76.4% | 54.0% |
| 2718723 | 228.1.1.1 ↗ | a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C | 0.54 | 36.0 | 3.65e-01 | 73.6% | 70.8% |
| 3593808 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 38.0 | 3.41e-01 | 73.6% | 92.0% |
| 4022739 | 304.4.1.3 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › YCII | 0.53 | 39.0 | 3.31e-01 | 77.8% | 46.7% |
| 3302278 | 1.1.1.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N | 0.53 | 37.0 | 2.77e-01 | 75.0% | 94.0% |
| 3853184 | 101.1.2.68 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 | 0.52 | 38.0 | 2.96e-01 | 77.8% | 69.0% |
| 2528752 | 304.114.1.2 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain › POL3_N | 0.51 | 37.0 | 3.42e-01 | 81.9% | 58.8% |