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rifoxya1_full_scaffold_1_prodigal-single.1__X__X__00067
Bact-Virrifoxya1_full_scaffold_1_prodigal-single.1__X__X__00067
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 50-216
Domain cluster:
rep: ON615601.1__UTS51982.1__X__00034__D5-121
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1n7zA01 | 2.60.340.10 | Mainly Beta › Sandwich › baseplate structural protein gp8, domain 1 › baseplate structural protein gp8, domain 1 | 0.60 | 53.0 | 5.36e-01 | 92.2% | 94.5% |
| 4c08A02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.57 | 45.0 | 4.40e-01 | 82.0% | 84.2% |
| 4g56A03 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.57 | 45.0 | 4.46e-01 | 82.0% | 81.3% |
| 3ua3A03 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.56 | 44.0 | 4.16e-01 | 82.0% | 81.8% |
| 1f3lA02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.53 | 42.0 | 4.20e-01 | 82.0% | 85.3% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4932865 | 3899.1.1.0 ↗ | beta complex topology › Baseplate structural protein gp8 › Baseplate structural protein gp8 › Baseplate structural protein gp8 | 0.77 | 62.0 | 6.81e-01 | 100.0% | 99.3% |
| 4023930 | 330.1.1.2 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Ribosomal_S5 | 0.66 | 24.0 | 3.44e-01 | 98.2% | 68.8% |
| 5031616 | 4.26.1.0 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 | 0.65 | 23.0 | 4.01e-01 | 79.0% | 96.4% |
| 2504393 | 3899.1.1.2 ↗ | beta complex topology › Baseplate structural protein gp8 › Baseplate structural protein gp8 › Baseplate structural protein gp8 › BW3TFN | 0.65 | 57.0 | 5.54e-01 | 92.2% | 90.0% |
| 3925105 | 3698.1.1.2 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT_C | 0.52 | 43.0 | 4.28e-01 | 90.4% | 86.1% |
| 3396774 | 220.1.1.168 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Tmpp129 | 0.50 | 27.0 | 3.35e-01 | 76.0% | 80.9% |