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rifoxya1_full_scaffold_1_prodigal-single.1__X__X__00163
Bact-Virrifoxya1_full_scaffold_1_prodigal-single.1__X__X__00163
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-125
Domain cluster:
rep: OV032902.1__CAH0447963.1__SM033_00139__00139__D168-264
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6o38A04 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.79 | 59.0 | 6.55e-01 | 93.7% | 97.8% |
| 6o38A01 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 59.0 | 6.37e-01 | 91.0% | 98.9% |
| 6o38A03 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 53.0 | 6.02e-01 | 86.5% | 98.8% |
| 1sppB00 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.63 | 49.0 | 4.92e-01 | 82.0% | 92.0% |
| 4v02C00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.58 | 45.0 | 4.43e-01 | 95.5% | 76.2% |
| 3ccfA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 41.0 | 3.26e-01 | 83.8% | 90.8% |
| 3dtnA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 40.0 | 3.45e-01 | 83.8% | 74.9% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2581340 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.78 | 58.0 | 6.47e-01 | 91.0% | 97.7% |
| 2581337 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.75 | 59.0 | 6.34e-01 | 91.0% | 97.8% |
| 3391275 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.59 | 39.0 | 4.03e-01 | 99.1% | 70.5% |
| 3646946 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.55 | 43.0 | 4.49e-01 | 82.0% | 98.0% |
| 3447738 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.55 | 42.0 | 4.36e-01 | 82.0% | 97.1% |
| 3982197 | 207.2.1.25 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › AIDA | 0.53 | 46.0 | 3.17e-01 | 100.0% | 26.4% |
| 3837212 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.52 | 40.0 | 4.26e-01 | 81.1% | 95.8% |
| 5053692 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.51 | 41.0 | 3.52e-01 | 86.5% | 95.0% |