rifoxya1_full_scaffold_1_prodigal-single.1XX__00318

Bact-Vir

rifoxya1_full_scaffold_1_prodigal-single.1__X__X__00318

Identity

90.9 mean pLDDT

Singleton — not in a non-trivial cluster

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-61

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4ar9A02	1.10.390.20	Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 ›	0.59	47.0	3.71e-01	94.9%	66.2%
5zorA01	1.10.238.10	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand	0.55	47.0	4.43e-01	100.0%	89.0%
6v7xB02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.52	41.0	4.21e-01	96.6%	96.4%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3975822	7579.1.1.89 ↗	a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › COesterase, BD-FAE	0.62	48.0	2.82e-01	84.7%	52.9%
3491886	190.1.1.1 ↗	alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box	0.60	35.0	3.31e-01	93.2%	45.3%
3578163	3198.1.1.1 ↗	alpha bundles › ABA-1 repeat unit › ABA-1 repeat unit › ABA-1 repeat unit › NPA	0.54	40.0	3.26e-01	83.1%	93.6%
5006620	5065.1.1.2 ↗	alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › FecCD	0.53	41.0	2.67e-01	88.1%	81.0%
3510252	170.2.1.0 ↗	alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein N-terminal domain › Retrovirus capsid protein N-terminal domain	0.53	41.0	3.94e-01	100.0%	74.3%