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rifoxya1_full_scaffold_1_prodigal-single.1__X__X__00324
Bact-Virrifoxya1_full_scaffold_1_prodigal-single.1__X__X__00324
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-254
Domain cluster:
rep: OQ067477.1__WCD44189.1__Lumi_050__00050__D65-227
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gnxB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 26.0 | 3.60e-01 | 84.8% | 78.7% |
| 3mxnB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 27.0 | 3.44e-01 | 92.6% | 85.5% |
| 4lizA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.50 | 25.0 | 3.20e-01 | 96.5% | 78.3% |
| 2x8xX01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.50 | 15.0 | 2.60e-01 | 84.8% | 76.3% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5076766 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.61 | 26.0 | 4.04e-01 | 93.0% | 98.9% |
| 5029914 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.60 | 16.0 | 3.07e-01 | 77.0% | 87.3% |
| 3490957 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.51 | 17.0 | 2.90e-01 | 72.2% | 88.0% |