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rifoxya1_full_scaffold_1_prodigal-single.1__X__X__00338
Bact-Virrifoxya1_full_scaffold_1_prodigal-single.1__X__X__00338
Identity
- Kingdom:
- phage
Quality
44.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 84-230
Domain cluster:
rep: SR-VP_0-2_scaffold_141_6534022_prodigal-single.1__X__X__00173__D95-290
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fx3B00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.53 | 34.0 | 3.41e-01 | 71.4% | 62.4% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3602292 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.58 | 34.0 | 4.05e-01 | 80.3% | 88.4% |
| 5028870 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.50 | 26.0 | 3.39e-01 | 81.0% | 98.6% |
D2
high
residues 289-376
D3
high
residues 618-714
D4
medium
residues 40-83_231-280
D5
medium
residues 486-617