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rifoxyb1_full_scaffold_4_prodigal-single.1__X__X__00069
Bact-Virrifoxyb1_full_scaffold_4_prodigal-single.1__X__X__00069
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 47-206
Domain cluster:
rep: MZ326863.1__QYW02339.1__CPT_Paku_045__00045__D5-122
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01464.26 best | SLT | 42.9 | 4.60e-11 | 72.5% | 82.9% |
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4yibA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.89 | 74.0 | 7.45e-01 | 85.0% | 93.0% |
| 6cfcA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.86 | 69.0 | 6.89e-01 | 81.9% | 93.2% |
| 1qsaA03 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.86 | 75.0 | 7.31e-01 | 90.6% | 91.9% |
| 4c5fA02 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.86 | 71.0 | 6.97e-01 | 85.0% | 100.0% |
| 4hjzA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.85 | 70.0 | 6.69e-01 | 85.0% | 93.4% |
| 7k5cB01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.81 | 60.0 | 6.06e-01 | 76.2% | 83.0% |
| 3bkhA02 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.80 | 67.0 | 6.36e-01 | 86.3% | 98.9% |
| 3w6bB00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.80 | 70.0 | 7.15e-01 | 91.3% | 98.0% |
| 4dq5B00 | 1.10.530.50 | Mainly Alpha › Orthogonal Bundle › Lysozyme › Peptidase U40 | 0.79 | 61.0 | 6.14e-01 | 79.4% | 90.6% |
| 2dqaA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.74 | 56.0 | 6.27e-01 | 78.1% | 100.0% |
| 153lA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.73 | 63.0 | 5.96e-01 | 90.0% | 80.0% |
| 4qdnA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.72 | 52.0 | 5.99e-01 | 86.3% | 100.0% |
| 1xsfA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.71 | 40.0 | 4.74e-01 | 76.2% | 80.6% |
| 4fdyA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.70 | 57.0 | 5.77e-01 | 84.4% | 98.8% |
| 4kt3A00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.68 | 55.0 | 5.85e-01 | 90.6% | 95.7% |
| 3fi7A01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.65 | 50.0 | 5.51e-01 | 89.4% | 98.5% |
| 1yjgA00 | 1.20.120.240 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Lipoprotein, type 6 | 0.61 | 27.0 | 2.80e-01 | 100.0% | 40.8% |
| 2oduA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 28.0 | 3.37e-01 | 96.9% | 70.5% |
| 3ed5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.56 | 30.0 | 3.97e-01 | 95.6% | 97.6% |
| 3vayA02 | 1.20.120.1600 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.55 | 31.0 | 4.03e-01 | 87.5% | 100.0% |
| 1ltmA02 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.55 | 47.0 | 4.61e-01 | 90.0% | 89.6% |
| 3h36A00 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.51 | 22.0 | 3.26e-01 | 88.7% | 88.5% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3166094 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.88 | 74.0 | 7.16e-01 | 86.9% | 100.0% |
| 5028353 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.87 | 76.0 | 7.26e-01 | 90.0% | 97.2% |
| 4995668 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.87 | 60.0 | 6.87e-01 | 70.0% | 99.2% |
| 3941811 | 235.1.1.32 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT, PF27553 | 0.87 | 75.0 | 7.32e-01 | 88.7% | 91.8% |
| 4530587 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.87 | 72.0 | 6.79e-01 | 85.6% | 93.5% |
| 3965879 | 235.1.1.32 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT, PF27553 | 0.86 | 75.0 | 7.43e-01 | 89.4% | 91.5% |
| 4431057 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.86 | 72.0 | 7.60e-01 | 86.9% | 98.6% |
| 3964630 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.86 | 72.0 | 7.19e-01 | 93.8% | 84.8% |
| 3947473 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.86 | 71.0 | 7.38e-01 | 95.6% | 91.3% |
| 3985073 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.85 | 69.0 | 7.46e-01 | 93.1% | 98.5% |
| 3979308 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.85 | 72.0 | 6.94e-01 | 86.9% | 97.1% |
| 3945171 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.85 | 70.0 | 7.34e-01 | 85.6% | 93.1% |
| 4515466 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.85 | 74.0 | 7.09e-01 | 90.6% | 98.9% |
| 4258903 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.85 | 66.0 | 6.60e-01 | 80.6% | 97.6% |
| 2393514 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.83 | 72.0 | 6.70e-01 | 89.4% | 92.6% |
| 3978377 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.83 | 73.0 | 6.74e-01 | 91.3% | 91.8% |
| 4164050 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.82 | 73.0 | 6.59e-01 | 91.3% | 87.3% |
| 4031083 | 235.1.1.14 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transglycosylas | 0.82 | 42.0 | 5.95e-01 | 72.5% | 100.0% |
| 3971115 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.82 | 71.0 | 6.97e-01 | 89.4% | 98.2% |
| 3839661 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.82 | 70.0 | 6.90e-01 | 89.4% | 92.4% |
| 3289359 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.81 | 73.0 | 6.99e-01 | 93.1% | 98.3% |
| 3385979 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.81 | 69.0 | 6.46e-01 | 88.1% | 81.1% |
| 1175858 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.80 | 67.0 | 6.26e-01 | 86.3% | 95.2% |
| 1266923 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.80 | 70.0 | 7.22e-01 | 91.3% | 99.3% |
| 4321901 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.79 | 69.0 | 6.51e-01 | 90.6% | 95.1% |
| 1005039 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.79 | 71.0 | 7.16e-01 | 94.4% | 99.4% |
| 3582448 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.78 | 59.0 | 6.58e-01 | 83.1% | 94.6% |
| 3944103 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.78 | 68.0 | 6.54e-01 | 91.3% | 94.4% |
| 4009649 | 632.3.1.13 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain › DUF1615 | 0.78 | 69.0 | 6.99e-01 | 93.1% | 95.0% |
| 3381140 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.75 | 69.0 | 6.58e-01 | 95.6% | 95.0% |
| 4455133 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.75 | 42.0 | 5.58e-01 | 83.1% | 100.0% |
| 4135695 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.75 | 39.0 | 5.40e-01 | 77.5% | 100.0% |
| 3205219 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.75 | 63.0 | 6.16e-01 | 86.9% | 89.4% |
| 3657952 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.74 | 69.0 | 6.37e-01 | 98.1% | 90.0% |
| 185214 | 235.1.1.14 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transglycosylas | 0.73 | 39.0 | 5.13e-01 | 76.9% | 94.3% |
| 5029852 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.72 | 62.0 | 6.27e-01 | 90.6% | 91.3% |
| 3989161 | 235.1.1.10 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase | 0.70 | 58.0 | 5.70e-01 | 93.1% | 81.8% |
| 3459724 | 604.1.1.102 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF8324 | 0.65 | 29.0 | 3.36e-01 | 96.9% | 56.5% |
| 3785916 | 3559.1.1.40 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Bap31 | 0.56 | 28.0 | 3.32e-01 | 90.6% | 67.3% |
| 3956517 | 5069.1.3.3 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › Fumarate_red_D | 0.55 | 28.0 | 3.23e-01 | 100.0% | 65.0% |
| 3833442 | 142.1.1.29 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › zf-RVT | 0.53 | 37.0 | 3.77e-01 | 71.9% | 80.6% |
| 3886860 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.50 | 26.0 | 2.97e-01 | 98.8% | 63.3% |