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rifoxyb1_full_scaffold_4_prodigal-single.1__X__X__00083
Bact-Virrifoxyb1_full_scaffold_4_prodigal-single.1__X__X__00083
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 15-140_241-261
Domain cluster:
rep: IMGVR_UViG_3300029267_002151-3300029267-Ga0310068_100093953__D1-161_239-277
CATH (56)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5iheB01 | 3.60.21.50 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › | 0.81 | 77.0 | 5.84e-01 | 99.3% | 90.0% |
| 3d03A01 | 3.60.21.40 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › GpdQ, catalytic alpha/beta sandwich domain | 0.74 | 61.0 | 6.41e-01 | 94.6% | 96.2% |
| 7s0tF01 | 3.60.21.50 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › | 0.71 | 67.0 | 5.13e-01 | 100.0% | 92.3% |
| 2w9xA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.67 | 53.0 | 4.57e-01 | 82.3% | 83.1% |
| 5facA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.64 | 46.0 | 4.00e-01 | 82.3% | 49.3% |
| 2ddxA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.63 | 50.0 | 3.87e-01 | 83.7% | 96.3% |
| 7q1bA01 | 3.40.800.20 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain | 0.63 | 49.0 | 3.63e-01 | 82.3% | 55.6% |
| 3emzA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.60 | 53.0 | 4.14e-01 | 98.6% | 91.2% |
| 1itcA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.60 | 53.0 | 3.87e-01 | 98.0% | 97.8% |
| 4v1ap00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.59 | 29.0 | 3.49e-01 | 96.6% | 68.0% |
| 5a4aA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.59 | 46.0 | 4.10e-01 | 81.6% | 76.9% |
| 3po3S02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.59 | 21.0 | 3.01e-01 | 100.0% | 66.2% |
| 4acyA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 46.0 | 3.52e-01 | 81.6% | 55.4% |
| 1gz1A00 | 3.20.20.40 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 1, 4-beta cellobiohydrolase | 0.59 | 54.0 | 4.02e-01 | 100.0% | 84.8% |
| 5jbkA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 53.0 | 3.74e-01 | 100.0% | 92.9% |
| 1dysA00 | 3.20.20.40 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 1, 4-beta cellobiohydrolase | 0.58 | 52.0 | 3.96e-01 | 98.0% | 99.1% |
| 4ovxA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.58 | 46.0 | 3.84e-01 | 85.7% | 65.2% |
| 3ua3B01 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.58 | 46.0 | 3.77e-01 | 85.0% | 63.1% |
| 1tyyA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.58 | 49.0 | 3.85e-01 | 89.8% | 49.5% |
| 6m4eA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 51.0 | 3.49e-01 | 96.6% | 89.0% |
| 7b7pA01 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.57 | 48.0 | 3.97e-01 | 89.8% | 79.1% |
| 3icfB00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.57 | 53.0 | 4.07e-01 | 100.0% | 81.5% |
| 5jx5A00 | 3.20.20.40 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 1, 4-beta cellobiohydrolase | 0.57 | 52.0 | 4.01e-01 | 100.0% | 94.1% |
| 2qi2A03 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.57 | 25.0 | 3.10e-01 | 80.3% | 62.8% |
| 4d8tA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 36.0 | 4.05e-01 | 95.2% | 83.5% |
| 3k30A03 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 36.0 | 3.78e-01 | 87.1% | 69.2% |
| 3dhuA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 49.0 | 3.79e-01 | 96.6% | 100.0% |
| 1qmiA02 | 3.30.360.20 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › RNA 3'-terminal phosphate cyclase, insert domain | 0.56 | 28.0 | 3.34e-01 | 96.6% | 71.4% |
| 3e8xA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 42.0 | 3.76e-01 | 79.6% | 85.5% |
| 3bmxA01 | 3.20.20.300 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase, family 3, N-terminal domain | 0.56 | 50.0 | 3.71e-01 | 100.0% | 77.2% |
| 3cynB00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 43.0 | 4.08e-01 | 100.0% | 68.2% |
| 3lhxA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.55 | 46.0 | 3.64e-01 | 88.4% | 50.0% |
| 2qjcA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.55 | 51.0 | 4.43e-01 | 100.0% | 93.2% |
| 6qkgA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 33.0 | 3.69e-01 | 84.4% | 76.6% |
| 2nlyA00 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.55 | 49.0 | 4.30e-01 | 97.3% | 95.4% |
| 1jbkA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 44.0 | 4.06e-01 | 85.7% | 73.0% |
| 4du5B00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.54 | 45.0 | 3.58e-01 | 88.4% | 47.1% |
| 3ktnA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.54 | 44.0 | 3.39e-01 | 87.8% | 47.9% |
| 2dyuA01 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.54 | 48.0 | 3.86e-01 | 99.3% | 80.6% |
| 1rjqA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.54 | 47.0 | 3.78e-01 | 97.3% | 90.2% |
| 2gs3A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 42.0 | 4.04e-01 | 100.0% | 71.9% |
| 4e69A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.53 | 44.0 | 3.49e-01 | 90.5% | 88.4% |
| 2j63A00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.53 | 42.0 | 3.29e-01 | 85.7% | 86.2% |
| 5h8iI00 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.53 | 46.0 | 3.77e-01 | 99.3% | 82.9% |
| 3qtgA01 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.52 | 44.0 | 3.80e-01 | 92.5% | 87.9% |
| 1xdpA03 | 3.30.870.10 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A | 0.52 | 42.0 | 3.89e-01 | 85.7% | 73.9% |
| 1xw8A00 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.52 | 46.0 | 3.98e-01 | 97.3% | 96.1% |
| 1g5bB00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.52 | 48.0 | 4.15e-01 | 100.0% | 96.8% |
| 2e7yB00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.52 | 41.0 | 3.37e-01 | 83.7% | 48.3% |
| 4wjmA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 44.0 | 3.47e-01 | 92.5% | 47.1% |
| 3iq0A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 42.0 | 3.35e-01 | 88.4% | 46.6% |
| 1auiA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.51 | 46.0 | 3.46e-01 | 100.0% | 66.9% |
| 3ewmA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 44.0 | 3.48e-01 | 92.5% | 59.5% |
| 6ajpA00 | 3.40.470.10 | Alpha Beta › 3-Layer(aba) Sandwich › Uracil-DNA Glycosylase, subunit E › Uracil-DNA glycosylase-like domain | 0.51 | 37.0 | 3.33e-01 | 73.5% | 73.8% |
| 1l7eA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 40.0 | 3.83e-01 | 85.7% | 91.0% |
| 2ymbA00 | 3.30.870.30 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › MITD, C-terminal phospholipase D-like domain | 0.50 | 40.0 | 4.01e-01 | 85.7% | 95.4% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5080277 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.93 | 90.0 | 7.31e-01 | 100.0% | 100.0% |
| 5022422 | 246.2.1.7 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › DNA_pol_E_B | 0.82 | 77.0 | 5.82e-01 | 99.3% | 93.4% |
| 4956523 | 246.2.1.7 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › DNA_pol_E_B | 0.81 | 78.0 | 6.04e-01 | 100.0% | 98.6% |
| 5053888 | 246.2.1.7 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › DNA_pol_E_B | 0.80 | 76.0 | 5.89e-01 | 100.0% | 98.6% |
| 4937076 | 246.2.1.7 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › DNA_pol_E_B | 0.79 | 76.0 | 5.83e-01 | 100.0% | 99.3% |
| None | — | 0.75 | 69.0 | 5.19e-01 | 97.3% | 91.8% | |
| 3347833 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.75 | 69.0 | 5.12e-01 | 97.3% | 84.9% |
| 5059045 | 246.2.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases | 0.73 | 69.0 | 5.49e-01 | 99.3% | 95.6% |
| 3485397 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.73 | 67.0 | 5.04e-01 | 98.0% | 87.9% |
| 3276080 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.72 | 67.0 | 4.93e-01 | 100.0% | 79.2% |
| 5012633 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.72 | 67.0 | 5.37e-01 | 96.6% | 88.1% |
| 4946397 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.72 | 69.0 | 5.40e-01 | 100.0% | 93.9% |
| 5048095 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.72 | 66.0 | 5.36e-01 | 96.6% | 91.7% |
| 4964125 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.70 | 63.0 | 5.11e-01 | 95.2% | 90.4% |
| 3269557 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.69 | 64.0 | 4.90e-01 | 99.3% | 80.0% |
| 3284356 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.68 | 62.0 | 4.98e-01 | 95.2% | 94.6% |
| 3460251 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.66 | 61.0 | 4.67e-01 | 98.0% | 81.9% |
| 4614684 | 2002.2.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › Cellulases › Cellulases › Glyco_hydro_6 | 0.66 | 53.0 | 3.96e-01 | 85.0% | 93.8% |
| 3966841 | 2496.1.1.0 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like | 0.61 | 44.0 | 4.76e-01 | 79.6% | 88.0% |
| 4958402 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.61 | 55.0 | 4.32e-01 | 95.9% | 94.8% |
| 4022463 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 49.0 | 3.86e-01 | 85.7% | 82.2% |
| 11366 | 2485.2.1.1 ↗ | a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert | 0.61 | 29.0 | 3.52e-01 | 96.6% | 67.4% |
| 3993371 | 2485.1.1.45 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_8 | 0.60 | 44.0 | 4.22e-01 | 100.0% | 65.3% |
| 3217203 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.60 | 29.0 | 3.55e-01 | 96.6% | 70.2% |
| 4948235 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 48.0 | 4.18e-01 | 85.7% | 84.9% |
| 3192703 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.59 | 54.0 | 4.35e-01 | 100.0% | 93.7% |
| 4943316 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 47.0 | 4.23e-01 | 85.7% | 82.9% |
| 4996020 | 7569.1.1.2 ↗ | a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › DUF5591 | 0.59 | 41.0 | 3.92e-01 | 71.4% | 92.5% |
| 5008697 | 2007.15.1.19 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › DUF7768 | 0.59 | 30.0 | 3.55e-01 | 79.6% | 70.0% |
| 3166134 | 2002.3.1.5 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_2 | 0.58 | 48.0 | 4.19e-01 | 89.8% | 87.8% |
| 3930313 | 207.1.1.156 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF27094 | 0.58 | 50.0 | 3.49e-01 | 93.9% | 95.6% |
| 3264287 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.58 | 44.0 | 3.45e-01 | 80.3% | 72.9% |
| 3586943 | 2004.1.1.68 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IstB_IS21 | 0.57 | 45.0 | 4.09e-01 | 85.7% | 73.2% |
| 5010846 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.57 | 43.0 | 4.03e-01 | 79.6% | 81.7% |
| 1169922 | 2002.1.1.4 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Alpha-amylase | 0.56 | 49.0 | 3.79e-01 | 96.6% | 99.7% |
| 3959887 | 2006.1.6.21 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_CoxE | 0.56 | 45.0 | 3.78e-01 | 85.7% | 82.0% |
| 1255408 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.56 | 47.0 | 3.69e-01 | 89.1% | 49.8% |
| 3960782 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.55 | 46.0 | 3.66e-01 | 89.1% | 83.7% |
| 9005 | 2002.3.1.5 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_2 | 0.55 | 49.0 | 4.30e-01 | 97.3% | 95.4% |
| 4976580 | 7604.1.1.0 ↗ | a/b three-layered sandwiches › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit | 0.55 | 35.0 | 3.90e-01 | 78.9% | 81.7% |
| None | — | 0.55 | 39.0 | 2.77e-01 | 80.3% | 22.2% | |
| 5050328 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.55 | 49.0 | 3.85e-01 | 98.0% | 66.5% |
| 2393041 | 246.1.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase | 0.54 | 48.0 | 3.90e-01 | 100.0% | 86.1% |
| 3871885 | 2496.1.1.6 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › CRAL_TRIO_2 | 0.54 | 47.0 | 4.38e-01 | 94.6% | 87.0% |
| 4031541 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.54 | 44.0 | 3.68e-01 | 89.1% | 100.0% |
| 3306499 | 207.1.1.77 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBD | 0.53 | 41.0 | 2.97e-01 | 79.6% | 28.9% |
| 3696439 | 2002.1.1.100 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ComA | 0.53 | 46.0 | 3.79e-01 | 94.6% | 96.4% |
| 3738507 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.53 | 43.0 | 3.44e-01 | 85.7% | 76.9% |
| 3165815 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.53 | 44.0 | 3.47e-01 | 89.1% | 47.8% |
| 3197918 | 2485.1.1.2 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GSHPx | 0.53 | 43.0 | 4.04e-01 | 100.0% | 70.9% |
| 4998710 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 43.0 | 3.95e-01 | 85.7% | 74.7% |
| 3244232 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 46.0 | 4.08e-01 | 93.2% | 96.7% |
| 3971129 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.52 | 44.0 | 3.48e-01 | 91.8% | 55.9% |
| 4938359 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.52 | 44.0 | 3.63e-01 | 95.2% | 100.0% |
| 5067896 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.51 | 43.0 | 3.96e-01 | 89.8% | 91.6% |
| 3956125 | 7539.1.1.1 ↗ | a/b three-layered sandwiches › Creatininase › Creatininase › Creatininase › Creatininase | 0.51 | 38.0 | 3.32e-01 | 78.9% | 60.9% |
| 3387206 | 2002.3.1.5 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_2 | 0.51 | 45.0 | 3.95e-01 | 97.3% | 90.7% |
| 3284526 | 2486.1.1.1 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 | 0.51 | 42.0 | 3.58e-01 | 91.2% | 72.5% |
| 3593396 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 42.0 | 3.86e-01 | 89.8% | 86.7% |
| 5065309 | 7579.1.1.13 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DLH | 0.50 | 39.0 | 3.20e-01 | 79.6% | 74.6% |
D2
medium
residues 141-240
Domain cluster:
rep: IMGVR_UViG_3300001480_000052-3300001480-rank13_1001986622__D127-224
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kknA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.74 | 46.0 | 3.91e-01 | 88.0% | 40.1% |
| 3e0jA01 | 3.60.21.50 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › | 0.66 | 56.0 | 3.88e-01 | 89.0% | 32.4% |
| 3qfmA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.63 | 57.0 | 4.17e-01 | 98.0% | 55.8% |
| 5nthA01 | 3.40.50.10590 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Zn-dependent exopeptidases | 0.60 | 41.0 | 3.39e-01 | 72.0% | 82.3% |
| 1xm7A00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.58 | 40.0 | 3.24e-01 | 86.0% | 38.2% |
| 4mh4A02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.57 | 35.0 | 3.59e-01 | 83.0% | 62.8% |
| 1nnwB00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.57 | 51.0 | 3.81e-01 | 98.0% | 50.6% |
| 1io7A00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.53 | 44.0 | 3.09e-01 | 93.0% | 81.1% |
| 2be3B01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.53 | 38.0 | 3.52e-01 | 77.0% | 100.0% |
| 7rd0A02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.52 | 40.0 | 2.94e-01 | 85.0% | 80.1% |
| 3mgxB00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.52 | 43.0 | 2.89e-01 | 90.0% | 58.8% |
| 8fwpB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 39.0 | 2.97e-01 | 100.0% | 34.0% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5080277 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.85 | 77.0 | 5.60e-01 | 100.0% | 39.3% |
| 3632270 | 246.2.1.7 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › DNA_pol_E_B | 0.69 | 57.0 | 3.78e-01 | 89.0% | 85.9% |
| 4972924 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.64 | 46.0 | 4.38e-01 | 88.0% | 65.2% |
| 3586297 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.61 | 51.0 | 3.46e-01 | 90.0% | 53.2% |
| 3610560 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.61 | 37.0 | 3.54e-01 | 93.0% | 52.2% |
| 3483412 | 246.2.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases | 0.61 | 50.0 | 3.61e-01 | 88.0% | 54.8% |
| 4932745 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.59 | 49.0 | 3.56e-01 | 88.0% | 53.6% |
| 3991286 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.59 | 43.0 | 2.89e-01 | 75.0% | 94.5% |
| 5044379 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.54 | 35.0 | 2.92e-01 | 72.0% | 36.7% |
| 4995864 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.54 | 34.0 | 2.84e-01 | 100.0% | 35.4% |
| 3470904 | 2004.1.1.164 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Roc | 0.53 | 37.0 | 3.00e-01 | 75.0% | 38.4% |
| 5077488 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.52 | 35.0 | 2.89e-01 | 74.0% | 37.8% |
| 3502204 | 3315.1.1.1 ↗ | a+b complex topology › Insertion domain in O-GlcNAc transferase › Insertion domain in O-GlcNAc transferase › Insertion domain in O-GlcNAc transferase › Glyco_transf_41 | 0.52 | 38.0 | 3.80e-01 | 93.0% | 75.0% |
| 3896215 | 2004.1.1.118 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AIG1 | 0.52 | 38.0 | 3.11e-01 | 77.0% | 75.8% |
| 3284727 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.51 | 40.0 | 4.19e-01 | 85.0% | 93.3% |
| 3783003 | 2004.1.1.54 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Septin | 0.51 | 39.0 | 2.85e-01 | 100.0% | 27.7% |
| 3701183 | 2004.1.1.164 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Roc | 0.51 | 41.0 | 3.19e-01 | 89.0% | 79.1% |
| 3581240 | 2004.1.1.54 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Septin | 0.51 | 39.0 | 3.58e-01 | 100.0% | 60.7% |
| 3256285 | 246.2.1.5 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos,ASMase_C | 0.50 | 44.0 | 2.98e-01 | 100.0% | 53.3% |
| 4932976 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.50 | 35.0 | 3.45e-01 | 72.0% | 100.0% |